RNA–Protein interactions for RNA: ENST00000437025.6

GABRA1-204, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-204ENST00000437025 BIVM-ERCC5R4GMW8 1640 aa15.34■□□□□ 0.05
GABRA1-204ENST00000437025 RAB3GAP2Q9H2M9 1393 aa15.34■□□□□ 0.05
GABRA1-204ENST00000437025 DDX10Q13206 875 aaKnown RBP15.33■□□□□ 0.04
GABRA1-204ENST00000437025 FHOD3Q2V2M9 1422 aa15.31■□□□□ 0.04
GABRA1-204ENST00000437025 RAD54L2Q9Y4B4 1467 aa15.31■□□□□ 0.04
GABRA1-204ENST00000437025 CLSPNQ9HAW4 1339 aa15.29■□□□□ 0.04
GABRA1-204ENST00000437025 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.03
GABRA1-204ENST00000437025 TDRD9Q8NDG6 1382 aaKnown RBP15.27■□□□□ 0.03
GABRA1-204ENST00000437025 BCANQ96GW7 911 aa15.27■□□□□ 0.03
GABRA1-204ENST00000437025 KCNH8Q96L42 1107 aa15.26■□□□□ 0.03
GABRA1-204ENST00000437025 CHIC2Q9UKJ5 165 aa15.25■□□□□ 0.03
GABRA1-204ENST00000437025 PHLDB1Q86UU1 1377 aa15.25■□□□□ 0.03
GABRA1-204ENST00000437025 NESP48681 1621 aa15.25■□□□□ 0.03
GABRA1-204ENST00000437025 RRBP1Q9P2E9 1410 aaKnown RBP15.24■□□□□ 0.03
GABRA1-204ENST00000437025 DAXXQ9UER7 740 aaPredicted RBP15.24■□□□□ 0.03
GABRA1-204ENST00000437025 MTUS2Q5JR59 1369 aa15.24■□□□□ 0.03
GABRA1-204ENST00000437025 TRIM52Q96A61 297 aa15.22■□□□□ 0.03
GABRA1-204ENST00000437025 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
GABRA1-204ENST00000437025 SETD5Q9C0A6 1442 aa15.22■□□□□ 0.03
GABRA1-204ENST00000437025 EIF5BO60841 1220 aaKnown RBP15.21■□□□□ 0.03
GABRA1-204ENST00000437025 FHAD1B1AJZ9 1412 aa15.2■□□□□ 0.02
GABRA1-204ENST00000437025 CC2D2AQ9P2K1 1620 aa15.18■□□□□ 0.02
GABRA1-204ENST00000437025 RRP7BPQ9NSQ0 103 aa15.18■□□□□ 0.02
GABRA1-204ENST00000437025 CNGB1Q14028 1251 aaPredicted RBP15.18■□□□□ 0.02
GABRA1-204ENST00000437025 LRRC9Q6ZRR7 1453 aa15.16■□□□□ 0.02
GABRA1-204ENST00000437025 TONSLQ96HA7 1378 aa15.15■□□□□ 0.02
GABRA1-204ENST00000437025 TIAM1Q13009 1591 aa15.12■□□□□ 0.01
GABRA1-204ENST00000437025 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
GABRA1-204ENST00000437025 ANP32CO43423 234 aa15.11■□□□□ 0.01
GABRA1-204ENST00000437025 SUPT16HQ9Y5B9 1047 aaKnown RBP15.09■□□□□ 0.01
GABRA1-204ENST00000437025 FBLN2P98095 1184 aa15.09■□□□□ 0.01
GABRA1-204ENST00000437025 TOPBP1Q92547 1522 aa15.08■□□□□ 0.01
GABRA1-204ENST00000437025 NEFLP07196 543 aa15.07■□□□□ 0
GABRA1-204ENST00000437025 POLR3GLQ9BT43 218 aa15.07■□□□□ 0
GABRA1-204ENST00000437025 PCF11O94913 1555 aaKnown RBP15.07■□□□□ 0
GABRA1-204ENST00000437025 FKBP8Q14318 412 aa15.06■□□□□ 0
GABRA1-204ENST00000437025 PPP1R15AO75807 674 aaPredicted RBP15.03■□□□□ -0
GABRA1-204ENST00000437025 FOXD1Q16676 465 aa15.03■□□□□ -0
GABRA1-204ENST00000437025 FMN1Q68DA7 1419 aa15.02■□□□□ -0
GABRA1-204ENST00000437025 ZNF777Q9ULD5 760 aaPredicted RBP15.01□□□□□ -0.01
GABRA1-204ENST00000437025 WDR97A6NE52 1622 aa15□□□□□ -0.01
GABRA1-204ENST00000437025 MAPKBP1O60336 1514 aa15□□□□□ -0.01
GABRA1-204ENST00000437025 ZNF326Q5BKZ1 582 aaKnown RBP15□□□□□ -0.01
GABRA1-204ENST00000437025 DNMBPQ6XZF7 1577 aa14.99□□□□□ -0.01
GABRA1-204ENST00000437025 FGD6Q6ZV73 1430 aa14.99□□□□□ -0.01
GABRA1-204ENST00000437025 CASKIN1Q8WXD9 1431 aa14.99□□□□□ -0.01
GABRA1-204ENST00000437025 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
GABRA1-204ENST00000437025 GAPVD1Q14C86 1478 aa14.98□□□□□ -0.01
GABRA1-204ENST00000437025 PDS5BQ9NTI5 1447 aa14.97□□□□□ -0.01
GABRA1-204ENST00000437025 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
GABRA1-204ENST00000437025 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
GABRA1-204ENST00000437025 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
GABRA1-204ENST00000437025 HNRNPUQ00839 825 aaKnown RBP eCLIP14.94□□□□□ -0.02
GABRA1-204ENST00000437025 IRX6P78412 446 aaPredicted RBP14.93□□□□□ -0.02
GABRA1-204ENST00000437025 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.02
GABRA1-204ENST00000437025 MAP3K1Q13233 1512 aa14.91□□□□□ -0.02
GABRA1-204ENST00000437025 NCOA2Q15596 1464 aa14.91□□□□□ -0.02
GABRA1-204ENST00000437025 PTPRKQ15262 1439 aa14.89□□□□□ -0.03
GABRA1-204ENST00000437025 TIMELESSQ9UNS1 1208 aa14.89□□□□□ -0.03
GABRA1-204ENST00000437025 SENP3-EIF4A1A0A087X0R7 540 aa14.89□□□□□ -0.03
GABRA1-204ENST00000437025 PRDM2Q13029 1718 aa14.89□□□□□ -0.03
GABRA1-204ENST00000437025 EFCAB5A4FU69 1503 aa14.88□□□□□ -0.03
GABRA1-204ENST00000437025 HSPA5P11021 654 aaKnown RBP14.87□□□□□ -0.03
GABRA1-204ENST00000437025 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
GABRA1-204ENST00000437025 MYOM3Q5VTT5 1437 aa14.87□□□□□ -0.03
GABRA1-204ENST00000437025 FAM9BQ8IZU0 186 aa14.87□□□□□ -0.03
GABRA1-204ENST00000437025 ZNF644Q9H582 1327 aaPredicted RBP14.86□□□□□ -0.03
GABRA1-204ENST00000437025 CHMP7Q8WUX9 453 aaPredicted RBP14.86□□□□□ -0.03
GABRA1-204ENST00000437025 EIF4G2P78344 907 aaKnown RBP eCLIP14.85□□□□□ -0.03
GABRA1-204ENST00000437025 MPHOSPH9Q99550 1183 aa14.85□□□□□ -0.03
GABRA1-204ENST00000437025 L3MBTL2Q969R5 705 aa14.83□□□□□ -0.04
GABRA1-204ENST00000437025 CDK11AQ9UQ88 783 aaPredicted RBP14.83□□□□□ -0.04
GABRA1-204ENST00000437025 UACAQ9BZF9 1416 aa14.83□□□□□ -0.04
GABRA1-204ENST00000437025 NAIPQ13075 1403 aa14.82□□□□□ -0.04
GABRA1-204ENST00000437025 TSHZ2Q9NRE2 1034 aa14.82□□□□□ -0.04
GABRA1-204ENST00000437025 CUL7Q14999 1698 aa14.81□□□□□ -0.04
GABRA1-204ENST00000437025 CFAP43Q8NDM7 1665 aa14.81□□□□□ -0.04
GABRA1-204ENST00000437025 HFM1A2PYH4 1435 aa14.81□□□□□ -0.04
GABRA1-204ENST00000437025 CFDP1Q9UEE9 299 aaPredicted RBP14.8□□□□□ -0.04
GABRA1-204ENST00000437025 SNAPC4Q5SXM2 1469 aa14.8□□□□□ -0.04
GABRA1-204ENST00000437025 CDK13Q14004 1512 aaKnown RBP14.79□□□□□ -0.04
GABRA1-204ENST00000437025 CCER2I3L3R5 266 aa14.79□□□□□ -0.04
GABRA1-204ENST00000437025 PLEKHG5O94827 1062 aa14.77□□□□□ -0.04
GABRA1-204ENST00000437025 MRS2Q9HD23 443 aa14.77□□□□□ -0.04
GABRA1-204ENST00000437025 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.04
GABRA1-204ENST00000437025 CTTNBP2Q8WZ74 1663 aa14.76□□□□□ -0.05
GABRA1-204ENST00000437025 KDM2AQ9Y2K7 1162 aa14.76□□□□□ -0.05
GABRA1-204ENST00000437025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.75□□□□□ -0.05
GABRA1-204ENST00000437025 WASHC2AQ641Q2 1341 aa14.74□□□□□ -0.05
GABRA1-204ENST00000437025 GRIN2BQ13224 1484 aa14.73□□□□□ -0.05
GABRA1-204ENST00000437025 PTPN23Q9H3S7 1636 aa14.72□□□□□ -0.05
GABRA1-204ENST00000437025 EHBP1L1Q8N3D4 1523 aa14.71□□□□□ -0.05
GABRA1-204ENST00000437025 ERCC6Q03468 1493 aa14.71□□□□□ -0.05
GABRA1-204ENST00000437025 ZNF608Q9ULD9 1512 aaPredicted RBP14.71□□□□□ -0.06
GABRA1-204ENST00000437025 SUPT6HQ7KZ85 1726 aaKnown RBP14.71□□□□□ -0.06
GABRA1-204ENST00000437025 CCDC184Q52MB2 194 aa14.71□□□□□ -0.06
GABRA1-204ENST00000437025 EPRSP07814 1512 aaKnown RBP14.7□□□□□ -0.06
GABRA1-204ENST00000437025 NBPF8Q3BBV2 869 aa14.68□□□□□ -0.06
GABRA1-204ENST00000437025 MAGI3Q5TCQ9 1506 aa14.68□□□□□ -0.06
GABRA1-204ENST00000437025 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms