RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
VTI1A-202ENST00000432306 FANCD2Q9BXW9 1451 aa12.64□□□□□ -0.39
VTI1A-202ENST00000432306 RIMBP3CA6NJZ7 1639 aa12.62□□□□□ -0.39
VTI1A-202ENST00000432306 RIMBP3BA6NNM3 1639 aa12.62□□□□□ -0.39
VTI1A-202ENST00000432306 RIMBP3Q9UFD9 1639 aa12.62□□□□□ -0.39
VTI1A-202ENST00000432306 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-202ENST00000432306 GTF3C3Q9Y5Q9 886 aa12.61□□□□□ -0.39
VTI1A-202ENST00000432306 WIZO95785 1651 aa12.61□□□□□ -0.39
VTI1A-202ENST00000432306 LOC105371045A0A1W2PR82 267 aa12.59□□□□□ -0.39
VTI1A-202ENST00000432306 CFTRP13569 1480 aa12.57□□□□□ -0.4
VTI1A-202ENST00000432306 URB2Q14146 1524 aaKnown RBP12.54□□□□□ -0.4
VTI1A-202ENST00000432306 ARHGEF11O15085 1522 aa12.53□□□□□ -0.4
VTI1A-202ENST00000432306 PRDM2Q13029 1718 aa12.52□□□□□ -0.4
VTI1A-202ENST00000432306 FKBP8Q14318 412 aa12.52□□□□□ -0.41
VTI1A-202ENST00000432306 POTEDQ86YR6 584 aa12.5□□□□□ -0.41
VTI1A-202ENST00000432306 VSIG10Q8N0Z9 540 aa12.5□□□□□ -0.41
VTI1A-202ENST00000432306 ZNF219Q9P2Y4 722 aaPredicted RBP12.48□□□□□ -0.41
VTI1A-202ENST00000432306 IFT140Q96RY7 1462 aa12.47□□□□□ -0.41
VTI1A-202ENST00000432306 RNF39Q9H2S5 420 aa12.45□□□□□ -0.42
VTI1A-202ENST00000432306 PODXL2Q9NZ53 605 aa12.45□□□□□ -0.42
VTI1A-202ENST00000432306 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-202ENST00000432306 TOP2AP11388 1531 aaKnown RBP12.44□□□□□ -0.42
VTI1A-202ENST00000432306 ZNF608Q9ULD9 1512 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-202ENST00000432306 CYB5RLQ6IPT4 315 aa12.43□□□□□ -0.42
VTI1A-202ENST00000432306 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-202ENST00000432306 CHD1O14646 1710 aa12.4□□□□□ -0.42
VTI1A-202ENST00000432306 EIF4G3O43432 1585 aaKnown RBP12.4□□□□□ -0.42
VTI1A-202ENST00000432306 SPINK5Q9NQ38 1064 aaPredicted RBP12.4□□□□□ -0.43
VTI1A-202ENST00000432306 ARAP1Q96P48 1450 aa12.37□□□□□ -0.43
VTI1A-202ENST00000432306 ABCC8Q09428 1581 aa12.37□□□□□ -0.43
VTI1A-202ENST00000432306 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
VTI1A-202ENST00000432306 TMEM132AQ24JP5 1023 aa12.32□□□□□ -0.44
VTI1A-202ENST00000432306 DNMBPQ6XZF7 1577 aa12.32□□□□□ -0.44
VTI1A-202ENST00000432306 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
VTI1A-202ENST00000432306 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
VTI1A-202ENST00000432306 ACIN1Q9UKV3 1341 aaKnown RBP12.29□□□□□ -0.44
VTI1A-202ENST00000432306 FBLN2P98095 1184 aa12.28□□□□□ -0.44
VTI1A-202ENST00000432306 AQRO60306 1485 aaKnown RBP eCLIP12.28□□□□□ -0.44
VTI1A-202ENST00000432306 C1QBPQ07021 282 aaKnown RBP12.28□□□□□ -0.44
VTI1A-202ENST00000432306 CCDC88BA6NC98 1476 aa12.27□□□□□ -0.45
VTI1A-202ENST00000432306 CAPN15O75808 1086 aa12.26□□□□□ -0.45
VTI1A-202ENST00000432306 MKRN4PQ13434 485 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-202ENST00000432306 C14orf37Q86TY3 774 aa12.23□□□□□ -0.45
VTI1A-202ENST00000432306 SYNJ1O43426 1573 aa12.21□□□□□ -0.45
VTI1A-202ENST00000432306 CLASP1Q7Z460 1538 aa12.21□□□□□ -0.45
VTI1A-202ENST00000432306 POLA2Q14181 598 aa12.21□□□□□ -0.45
VTI1A-202ENST00000432306 NPM2Q86SE8 214 aaKnown RBP12.21□□□□□ -0.45
VTI1A-202ENST00000432306 POLA1P09884 1462 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-202ENST00000432306 WDR97A6NE52 1622 aa12.21□□□□□ -0.46
VTI1A-202ENST00000432306 FBXO3Q9UK99 471 aa12.2□□□□□ -0.46
VTI1A-202ENST00000432306 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
VTI1A-202ENST00000432306 SNAPC4Q5SXM2 1469 aa12.16□□□□□ -0.46
VTI1A-202ENST00000432306 NEUROD1Q13562 356 aa12.16□□□□□ -0.46
VTI1A-202ENST00000432306 MAGI1Q96QZ7 1491 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-202ENST00000432306 RAD54L2Q9Y4B4 1467 aa12.15□□□□□ -0.46
VTI1A-202ENST00000432306 CENPBP07199 599 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-202ENST00000432306 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-202ENST00000432306 SOGA1O94964 1423 aa12.15□□□□□ -0.46
VTI1A-202ENST00000432306 TDRD9Q8NDG6 1382 aaKnown RBP12.14□□□□□ -0.47
VTI1A-202ENST00000432306 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
VTI1A-202ENST00000432306 ABCB7O75027 752 aa12.11□□□□□ -0.47
VTI1A-202ENST00000432306 GRIN2BQ13224 1484 aa12.11□□□□□ -0.47
VTI1A-202ENST00000432306 SPDYE4A6NLX3 237 aa12.11□□□□□ -0.47
VTI1A-202ENST00000432306 SYNJ2O15056 1496 aa12.1□□□□□ -0.47
VTI1A-202ENST00000432306 GAPVD1Q14C86 1478 aa12.1□□□□□ -0.47
VTI1A-202ENST00000432306 FGD5Q6ZNL6 1462 aa12.09□□□□□ -0.47
VTI1A-202ENST00000432306 DIEXFQ68CQ4 756 aaKnown RBP12.08□□□□□ -0.48
VTI1A-202ENST00000432306 PBRM1Q86U86 1689 aa12.07□□□□□ -0.48
VTI1A-202ENST00000432306 EIF5BO60841 1220 aaKnown RBP12.06□□□□□ -0.48
VTI1A-202ENST00000432306 CCER1Q8TC90 406 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-202ENST00000432306 FAM9AQ8IZU1 332 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-202ENST00000432306 CUX1P39880 1505 aa12.01□□□□□ -0.49
VTI1A-202ENST00000432306 PROM2Q8N271 834 aa12□□□□□ -0.49
VTI1A-202ENST00000432306 EEA1Q15075 1411 aa12□□□□□ -0.49
VTI1A-202ENST00000432306 DSG3P32926 999 aa12□□□□□ -0.49
VTI1A-202ENST00000432306 TNIKQ9UKE5 1360 aa11.99□□□□□ -0.49
VTI1A-202ENST00000432306 KIF13AQ9H1H9 1805 aa11.99□□□□□ -0.49
VTI1A-202ENST00000432306 ZBTB12Q9Y330 459 aaPredicted RBP11.97□□□□□ -0.49
VTI1A-202ENST00000432306 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.49
VTI1A-202ENST00000432306 ERCC6L2Q5T890 1561 aa11.95□□□□□ -0.5
VTI1A-202ENST00000432306 ZNF316A6NFI3 1004 aaPredicted RBP11.95□□□□□ -0.5
VTI1A-202ENST00000432306 CEP170Q5SW79 1584 aa11.95□□□□□ -0.5
VTI1A-202ENST00000432306 ABCA10Q8WWZ4 1543 aa11.95□□□□□ -0.5
VTI1A-202ENST00000432306 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
VTI1A-202ENST00000432306 GRIN2AQ12879 1464 aa11.93□□□□□ -0.5
VTI1A-202ENST00000432306 SHROOM2Q13796 1616 aa11.92□□□□□ -0.5
VTI1A-202ENST00000432306 CLSPNQ9HAW4 1339 aa11.91□□□□□ -0.5
VTI1A-202ENST00000432306 NUP160Q12769 1436 aa11.91□□□□□ -0.5
VTI1A-202ENST00000432306 ADAMTS12P58397 1594 aa11.9□□□□□ -0.5
VTI1A-202ENST00000432306 FHAD1B1AJZ9 1412 aa11.84□□□□□ -0.51
VTI1A-202ENST00000432306 ABCC10Q5T3U5 1492 aa11.83□□□□□ -0.52
VTI1A-202ENST00000432306 NPM1P06748 294 aaKnown RBP eCLIP11.82□□□□□ -0.52
VTI1A-202ENST00000432306 FAM69CQ0P6D2 419 aa11.82□□□□□ -0.52
VTI1A-202ENST00000432306 MAPKBP1O60336 1514 aa11.82□□□□□ -0.52
VTI1A-202ENST00000432306 GOLGA3Q08378 1498 aa11.81□□□□□ -0.52
VTI1A-202ENST00000432306 KDM6BO15054 1643 aa11.81□□□□□ -0.52
VTI1A-202ENST00000432306 PRG4Q92954 1404 aaPredicted RBP11.81□□□□□ -0.52
VTI1A-202ENST00000432306 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
VTI1A-202ENST00000432306 DIP2BQ9P265 1576 aa11.81□□□□□ -0.52
VTI1A-202ENST00000432306 CACNB1Q02641 598 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms