RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 CARMIL1Q5VZK9 1371 aa22.62■■□□□ 1.21
GHDC-203ENST00000428494 PHLDB1Q86UU1 1377 aa22.62■■□□□ 1.21
GHDC-203ENST00000428494 SETD5Q9C0A6 1442 aa22.6■■□□□ 1.21
GHDC-203ENST00000428494 DDX10Q13206 875 aaKnown RBP22.59■■□□□ 1.21
GHDC-203ENST00000428494 LRRC9Q6ZRR7 1453 aa22.57■■□□□ 1.2
GHDC-203ENST00000428494 HIRIP3Q9BW71 556 aaPredicted RBP22.55■■□□□ 1.2
GHDC-203ENST00000428494 WDR97A6NE52 1622 aa22.54■■□□□ 1.2
GHDC-203ENST00000428494 FGD5Q6ZNL6 1462 aa22.53■■□□□ 1.2
GHDC-203ENST00000428494 MAP3K1Q13233 1512 aa22.51■■□□□ 1.19
GHDC-203ENST00000428494 TSHZ2Q9NRE2 1034 aa22.5■■□□□ 1.19
GHDC-203ENST00000428494 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
GHDC-203ENST00000428494 BCANQ96GW7 911 aa22.48■■□□□ 1.19
GHDC-203ENST00000428494 PRDM2Q13029 1718 aa22.45■■□□□ 1.18
GHDC-203ENST00000428494 PCF11O94913 1555 aaKnown RBP22.43■■□□□ 1.18
GHDC-203ENST00000428494 FHAD1B1AJZ9 1412 aa22.43■■□□□ 1.18
GHDC-203ENST00000428494 FHOD3Q2V2M9 1422 aa22.42■■□□□ 1.18
GHDC-203ENST00000428494 PPP1R15AO75807 674 aaPredicted RBP22.42■■□□□ 1.18
GHDC-203ENST00000428494 FKBP8Q14318 412 aa22.38■■□□□ 1.17
GHDC-203ENST00000428494 RAD54L2Q9Y4B4 1467 aa22.36■■□□□ 1.17
GHDC-203ENST00000428494 CFAP43Q8NDM7 1665 aa22.35■■□□□ 1.17
GHDC-203ENST00000428494 TRIM52Q96A61 297 aa22.33■■□□□ 1.17
GHDC-203ENST00000428494 TIMELESSQ9UNS1 1208 aa22.31■■□□□ 1.16
GHDC-203ENST00000428494 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
GHDC-203ENST00000428494 CASKIN1Q8WXD9 1431 aa22.26■■□□□ 1.15
GHDC-203ENST00000428494 FYCO1Q9BQS8 1478 aa22.26■■□□□ 1.15
GHDC-203ENST00000428494 ANP32CO43423 234 aa22.25■■□□□ 1.15
GHDC-203ENST00000428494 PTPRKQ15262 1439 aa22.22■■□□□ 1.15
GHDC-203ENST00000428494 FGD6Q6ZV73 1430 aa22.21■■□□□ 1.15
GHDC-203ENST00000428494 TONSLQ96HA7 1378 aa22.21■■□□□ 1.15
GHDC-203ENST00000428494 POLA1P09884 1462 aaPredicted RBP22.21■■□□□ 1.15
GHDC-203ENST00000428494 CCER2I3L3R5 266 aa22.2■■□□□ 1.14
GHDC-203ENST00000428494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.19■■□□□ 1.14
GHDC-203ENST00000428494 ABCA10Q8WWZ4 1543 aa22.19■■□□□ 1.14
GHDC-203ENST00000428494 MTUS2Q5JR59 1369 aa22.18■■□□□ 1.14
GHDC-203ENST00000428494 CCDC18Q5T9S5 1454 aa22.17■■□□□ 1.14
GHDC-203ENST00000428494 EFCAB5A4FU69 1503 aa22.17■■□□□ 1.14
GHDC-203ENST00000428494 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
GHDC-203ENST00000428494 CC2D2AQ9P2K1 1620 aa22.16■■□□□ 1.14
GHDC-203ENST00000428494 NESP48681 1621 aa22.16■■□□□ 1.14
GHDC-203ENST00000428494 AQRO60306 1485 aaKnown RBP eCLIP22.16■■□□□ 1.14
GHDC-203ENST00000428494 DNMBPQ6XZF7 1577 aa22.15■■□□□ 1.14
GHDC-203ENST00000428494 NEFLP07196 543 aa22.15■■□□□ 1.14
GHDC-203ENST00000428494 BCL11AQ9H165 835 aa22.14■■□□□ 1.14
GHDC-203ENST00000428494 ANP32EQ9BTT0 268 aa22.13■■□□□ 1.13
GHDC-203ENST00000428494 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
GHDC-203ENST00000428494 SNAPC4Q5SXM2 1469 aa22.12■■□□□ 1.13
GHDC-203ENST00000428494 HFM1A2PYH4 1435 aa22.1■■□□□ 1.13
GHDC-203ENST00000428494 UACAQ9BZF9 1416 aa22.1■■□□□ 1.13
GHDC-203ENST00000428494 CTTNBP2Q8WZ74 1663 aa22.1■■□□□ 1.13
GHDC-203ENST00000428494 TDRD9Q8NDG6 1382 aaKnown RBP22.09■■□□□ 1.13
GHDC-203ENST00000428494 NAIPQ13075 1403 aa22.07■■□□□ 1.12
GHDC-203ENST00000428494 PTPN23Q9H3S7 1636 aa22.07■■□□□ 1.12
GHDC-203ENST00000428494 CUL7Q14999 1698 aa22.06■■□□□ 1.12
GHDC-203ENST00000428494 CHIC2Q9UKJ5 165 aa22.06■■□□□ 1.12
GHDC-203ENST00000428494 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
GHDC-203ENST00000428494 NCOA2Q15596 1464 aa22.06■■□□□ 1.12
GHDC-203ENST00000428494 RBM19Q9Y4C8 960 aaKnown RBP22.05■■□□□ 1.12
GHDC-203ENST00000428494 LRRIQ1Q96JM4 1722 aa22.05■■□□□ 1.12
GHDC-203ENST00000428494 MYOM3Q5VTT5 1437 aa22.02■■□□□ 1.12
GHDC-203ENST00000428494 HNRNPUQ00839 825 aaKnown RBP eCLIP22■■□□□ 1.11
GHDC-203ENST00000428494 KDM5BQ9UGL1 1544 aa21.99■■□□□ 1.11
GHDC-203ENST00000428494 IRX6P78412 446 aaPredicted RBP21.99■■□□□ 1.11
GHDC-203ENST00000428494 GRIN2BQ13224 1484 aa21.97■■□□□ 1.11
GHDC-203ENST00000428494 HSPA5P11021 654 aaKnown RBP21.97■■□□□ 1.11
GHDC-203ENST00000428494 URB2Q14146 1524 aaKnown RBP21.97■■□□□ 1.11
GHDC-203ENST00000428494 WASHC2AQ641Q2 1341 aa21.97■■□□□ 1.11
GHDC-203ENST00000428494 SAMD9Q5K651 1589 aa21.95■■□□□ 1.1
GHDC-203ENST00000428494 ARID3CA6NKF2 412 aa21.93■■□□□ 1.1
GHDC-203ENST00000428494 MAGI3Q5TCQ9 1506 aa21.92■■□□□ 1.1
GHDC-203ENST00000428494 GAPVD1Q14C86 1478 aa21.92■■□□□ 1.1
GHDC-203ENST00000428494 SUPT6HQ7KZ85 1726 aaKnown RBP21.92■■□□□ 1.1
GHDC-203ENST00000428494 FOXD1Q16676 465 aa21.91■■□□□ 1.1
GHDC-203ENST00000428494 CCDC184Q52MB2 194 aa21.9■■□□□ 1.1
GHDC-203ENST00000428494 DENND4BO75064 1496 aaPredicted RBP21.9■■□□□ 1.1
GHDC-203ENST00000428494 UGGT2Q9NYU1 1516 aa21.87■■□□□ 1.09
GHDC-203ENST00000428494 EHBP1L1Q8N3D4 1523 aa21.87■■□□□ 1.09
GHDC-203ENST00000428494 ABCA5Q8WWZ7 1642 aa21.86■■□□□ 1.09
GHDC-203ENST00000428494 C11orf95C9JLR9 678 aaPredicted RBP21.86■■□□□ 1.09
GHDC-203ENST00000428494 KDM6BO15054 1643 aa21.86■■□□□ 1.09
GHDC-203ENST00000428494 EIF4G2P78344 907 aaKnown RBP eCLIP21.85■■□□□ 1.09
GHDC-203ENST00000428494 L3MBTL2Q969R5 705 aa21.85■■□□□ 1.09
GHDC-203ENST00000428494 MPHOSPH9Q99550 1183 aa21.84■■□□□ 1.09
GHDC-203ENST00000428494 ARHGEF11O15085 1522 aa21.82■■□□□ 1.08
GHDC-203ENST00000428494 THOC2Q8NI27 1593 aaKnown RBP21.8■■□□□ 1.08
GHDC-203ENST00000428494 MSH5O43196 834 aa21.8■■□□□ 1.08
GHDC-203ENST00000428494 PRKCSHP14314 528 aaPredicted RBP21.79■■□□□ 1.08
GHDC-203ENST00000428494 FAM9BQ8IZU0 186 aa21.78■■□□□ 1.08
GHDC-203ENST00000428494 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
GHDC-203ENST00000428494 TCOF1Q13428 1488 aaKnown RBP21.77■■□□□ 1.08
GHDC-203ENST00000428494 CDK13Q14004 1512 aaKnown RBP21.75■■□□□ 1.07
GHDC-203ENST00000428494 NBPF8Q3BBV2 869 aa21.75■■□□□ 1.07
GHDC-203ENST00000428494 PRKRIP1Q9H875 184 aaPredicted RBP21.74■■□□□ 1.07
GHDC-203ENST00000428494 CNTLNQ9NXG0 1405 aa21.74■■□□□ 1.07
GHDC-203ENST00000428494 GCC2Q8IWJ2 1684 aa21.74■■□□□ 1.07
GHDC-203ENST00000428494 HECW1Q76N89 1606 aa21.74■■□□□ 1.07
GHDC-203ENST00000428494 EPRSP07814 1512 aaKnown RBP21.73■■□□□ 1.07
GHDC-203ENST00000428494 CDK11AQ9UQ88 783 aaPredicted RBP21.72■■□□□ 1.07
GHDC-203ENST00000428494 CCDC7Q96M83 1385 aa21.71■■□□□ 1.07
GHDC-203ENST00000428494 MRS2Q9HD23 443 aa21.7■■□□□ 1.06
GHDC-203ENST00000428494 ZNF644Q9H582 1327 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms