RNA–Protein interactions for RNA: ENST00000427904.1

CLDN12-205, Transcript of claudin 12, humanhuman

TSL 3

Gene CLDN12, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-205ENST00000427904 FANCD2Q9BXW9 1451 aa12.86□□□□□ -0.35
CLDN12-205ENST00000427904 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
CLDN12-205ENST00000427904 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
CLDN12-205ENST00000427904 PDS5BQ9NTI5 1447 aa12.8□□□□□ -0.36
CLDN12-205ENST00000427904 CEP164Q9UPV0 1460 aa12.8□□□□□ -0.36
CLDN12-205ENST00000427904 SSUH2Q9Y2M2 353 aa12.8□□□□□ -0.36
CLDN12-205ENST00000427904 CUX1P39880 1505 aa12.78□□□□□ -0.36
CLDN12-205ENST00000427904 WRNQ14191 1432 aaPredicted RBP eCLIP12.78□□□□□ -0.36
CLDN12-205ENST00000427904 ERCC6Q03468 1493 aa12.75□□□□□ -0.37
CLDN12-205ENST00000427904 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
CLDN12-205ENST00000427904 BIVM-ERCC5R4GMW8 1640 aa12.74□□□□□ -0.37
CLDN12-205ENST00000427904 TOP2BQ02880 1626 aa12.73□□□□□ -0.37
CLDN12-205ENST00000427904 THOC2Q8NI27 1593 aaKnown RBP12.73□□□□□ -0.37
CLDN12-205ENST00000427904 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
CLDN12-205ENST00000427904 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
CLDN12-205ENST00000427904 TOPBP1Q92547 1522 aa12.71□□□□□ -0.38
CLDN12-205ENST00000427904 REM2Q8IYK8 340 aaPredicted RBP12.7□□□□□ -0.38
CLDN12-205ENST00000427904 WDR62O43379 1518 aa12.67□□□□□ -0.38
CLDN12-205ENST00000427904 FGD5Q6ZNL6 1462 aa12.66□□□□□ -0.38
CLDN12-205ENST00000427904 POLA1P09884 1462 aaPredicted RBP12.63□□□□□ -0.39
CLDN12-205ENST00000427904 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
CLDN12-205ENST00000427904 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
CLDN12-205ENST00000427904 RAD54L2Q9Y4B4 1467 aa12.6□□□□□ -0.39
CLDN12-205ENST00000427904 PROM2Q8N271 834 aa12.59□□□□□ -0.39
CLDN12-205ENST00000427904 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
CLDN12-205ENST00000427904 RUSC2Q8N2Y8 1516 aa12.57□□□□□ -0.4
CLDN12-205ENST00000427904 SOGA1O94964 1423 aa12.57□□□□□ -0.4
CLDN12-205ENST00000427904 TARBP1Q13395 1621 aaKnown RBP12.57□□□□□ -0.4
CLDN12-205ENST00000427904 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
CLDN12-205ENST00000427904 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
CLDN12-205ENST00000427904 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.41
CLDN12-205ENST00000427904 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.41
CLDN12-205ENST00000427904 ABCA5Q8WWZ7 1642 aa12.49□□□□□ -0.41
CLDN12-205ENST00000427904 ZNF608Q9ULD9 1512 aaPredicted RBP12.49□□□□□ -0.41
CLDN12-205ENST00000427904 IFT140Q96RY7 1462 aa12.49□□□□□ -0.41
CLDN12-205ENST00000427904 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
CLDN12-205ENST00000427904 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
CLDN12-205ENST00000427904 PRR29P0C7W0 189 aa12.47□□□□□ -0.41
CLDN12-205ENST00000427904 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
CLDN12-205ENST00000427904 TDRD9Q8NDG6 1382 aaKnown RBP12.46□□□□□ -0.41
CLDN12-205ENST00000427904 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
CLDN12-205ENST00000427904 PBRM1Q86U86 1689 aa12.45□□□□□ -0.42
CLDN12-205ENST00000427904 AQRO60306 1485 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■■□□□ 14.5
CLDN12-205ENST00000427904 EEA1Q15075 1411 aa12.42□□□□□ -0.42
CLDN12-205ENST00000427904 GAPVD1Q14C86 1478 aa12.41□□□□□ -0.42
CLDN12-205ENST00000427904 IGF1RP08069 1367 aa12.37□□□□□ -0.43
CLDN12-205ENST00000427904 KIF21BO75037 1637 aa12.36□□□□□ -0.43
CLDN12-205ENST00000427904 ERICH3Q5RHP9 1530 aa12.36□□□□□ -0.43
CLDN12-205ENST00000427904 ADAMTS12P58397 1594 aa12.35□□□□□ -0.43
CLDN12-205ENST00000427904 GRIN2BQ13224 1484 aa12.35□□□□□ -0.43
CLDN12-205ENST00000427904 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
CLDN12-205ENST00000427904 CUL7Q14999 1698 aa12.34□□□□□ -0.43
CLDN12-205ENST00000427904 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
CLDN12-205ENST00000427904 RAPGEF2Q9Y4G8 1499 aa12.34□□□□□ -0.43
CLDN12-205ENST00000427904 LOC105371045A0A1W2PR82 267 aa12.33□□□□□ -0.44
CLDN12-205ENST00000427904 PLEKHG5O94827 1062 aa12.31□□□□□ -0.44
CLDN12-205ENST00000427904 MIER1Q8N108 512 aa12.31□□□□□ -0.44
CLDN12-205ENST00000427904 PLCD3Q8N3E9 789 aa12.31□□□□□ -0.44
CLDN12-205ENST00000427904 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
CLDN12-205ENST00000427904 CARMIL1Q5VZK9 1371 aa12.3□□□□□ -0.44
CLDN12-205ENST00000427904 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLDN12-205ENST00000427904 GOLGA3Q08378 1498 aa12.28□□□□□ -0.44
CLDN12-205ENST00000427904 PRKAR2AP13861 404 aaKnown RBP12.28□□□□□ -0.44
CLDN12-205ENST00000427904 VASPP50552 380 aaPredicted RBP12.28□□□□□ -0.44
CLDN12-205ENST00000427904 MAGI1Q96QZ7 1491 aaPredicted RBP12.27□□□□□ -0.44
CLDN12-205ENST00000427904 CHD1O14646 1710 aa12.27□□□□□ -0.45
CLDN12-205ENST00000427904 FHAD1B1AJZ9 1412 aa12.26□□□□□ -0.45
CLDN12-205ENST00000427904 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
CLDN12-205ENST00000427904 SYNJ2O15056 1496 aa12.23□□□□□ -0.45
CLDN12-205ENST00000427904 GRIN2AQ12879 1464 aa12.22□□□□□ -0.45
CLDN12-205ENST00000427904 CTTNBP2Q8WZ74 1663 aa12.22□□□□□ -0.45
CLDN12-205ENST00000427904 CREBZFQ9NS37 354 aa12.21□□□□□ -0.45
CLDN12-205ENST00000427904 CEP170Q5SW79 1584 aa12.2□□□□□ -0.46
CLDN12-205ENST00000427904 UBTFP17480 764 aaKnown RBP12.19□□□□□ -0.46
CLDN12-205ENST00000427904 TNIKQ9UKE5 1360 aa12.17□□□□□ -0.46
CLDN12-205ENST00000427904 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
CLDN12-205ENST00000427904 CHMP7Q8WUX9 453 aaPredicted RBP12.16□□□□□ -0.46
CLDN12-205ENST00000427904 ZBTB47Q9UFB7 747 aaPredicted RBP12.16□□□□□ -0.46
CLDN12-205ENST00000427904 POTEHQ6S545 545 aa12.14□□□□□ -0.47
CLDN12-205ENST00000427904 RIMBP3CA6NJZ7 1639 aa12.14□□□□□ -0.47
CLDN12-205ENST00000427904 RIMBP3BA6NNM3 1639 aa12.14□□□□□ -0.47
CLDN12-205ENST00000427904 RIMBP3Q9UFD9 1639 aa12.14□□□□□ -0.47
CLDN12-205ENST00000427904 NUP160Q12769 1436 aa12.13□□□□□ -0.47
CLDN12-205ENST00000427904 CEP162Q5TB80 1403 aa12.13□□□□□ -0.47
CLDN12-205ENST00000427904 RANGAP1P46060 587 aaPredicted RBP12.13□□□□□ -0.47
CLDN12-205ENST00000427904 IQGAP2Q13576 1575 aa12.13□□□□□ -0.47
CLDN12-205ENST00000427904 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
CLDN12-205ENST00000427904 NPM1P06748 294 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLDN12-205ENST00000427904 CLASP1Q7Z460 1538 aa12.09□□□□□ -0.47
CLDN12-205ENST00000427904 CLIP1P30622 1438 aa12.09□□□□□ -0.47
CLDN12-205ENST00000427904 KIAA0586Q9BVV6 1533 aa12.08□□□□□ -0.48
CLDN12-205ENST00000427904 ARHGAP35Q9NRY4 1499 aa12.07□□□□□ -0.48
CLDN12-205ENST00000427904 SAMD9Q5K651 1589 aa12.06□□□□□ -0.48
CLDN12-205ENST00000427904 IFNLR1Q8IU57 520 aaPredicted RBP12.06□□□□□ -0.48
CLDN12-205ENST00000427904 CYB5RLQ6IPT4 315 aa12.05□□□□□ -0.48
CLDN12-205ENST00000427904 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
CLDN12-205ENST00000427904 ARAP1Q96P48 1450 aa12.05□□□□□ -0.48
CLDN12-205ENST00000427904 SHROOM2Q13796 1616 aa12.04□□□□□ -0.48
CLDN12-205ENST00000427904 UGGT2Q9NYU1 1516 aa12.04□□□□□ -0.48
CLDN12-205ENST00000427904 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms