RNA–Protein interactions for RNA: ENST00000427717.1

LINC00379-201, long intergenic non-protein coding RNA 379, humanhuman

TSL 2

Gene LINC00379, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00379-201ENST00000427717 NESP48681 1621 aa16.58■□□□□ 0.24
LINC00379-201ENST00000427717 ERCC6Q03468 1493 aa16.57■□□□□ 0.24
LINC00379-201ENST00000427717 PRKAR2AP13861 404 aaKnown RBP16.56■□□□□ 0.24
LINC00379-201ENST00000427717 PDS5BQ9NTI5 1447 aa16.55■□□□□ 0.24
LINC00379-201ENST00000427717 CUX2O14529 1486 aa16.51■□□□□ 0.23
LINC00379-201ENST00000427717 CFTRP13569 1480 aa16.49■□□□□ 0.23
LINC00379-201ENST00000427717 EVX2Q03828 476 aa16.45■□□□□ 0.22
LINC00379-201ENST00000427717 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
LINC00379-201ENST00000427717 CHADLQ6NUI6 762 aa16.44■□□□□ 0.22
LINC00379-201ENST00000427717 KIF21AQ7Z4S6 1674 aa16.41■□□□□ 0.22
LINC00379-201ENST00000427717 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
LINC00379-201ENST00000427717 PRR29P0C7W0 189 aa16.4■□□□□ 0.22
LINC00379-201ENST00000427717 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
LINC00379-201ENST00000427717 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
LINC00379-201ENST00000427717 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
LINC00379-201ENST00000427717 MRC2Q9UBG0 1479 aa16.35■□□□□ 0.21
LINC00379-201ENST00000427717 WDR62O43379 1518 aa16.31■□□□□ 0.2
LINC00379-201ENST00000427717 C19orf67A6NJJ6 358 aa16.24■□□□□ 0.19
LINC00379-201ENST00000427717 SUPT5HO00267 1087 aaKnown RBP16.24■□□□□ 0.19
LINC00379-201ENST00000427717 SPDYE4A6NLX3 237 aa16.21■□□□□ 0.19
LINC00379-201ENST00000427717 ABCC8Q09428 1581 aa16.21■□□□□ 0.18
LINC00379-201ENST00000427717 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
LINC00379-201ENST00000427717 TOPBP1Q92547 1522 aa16.1■□□□□ 0.17
LINC00379-201ENST00000427717 DNMBPQ6XZF7 1577 aa16.1■□□□□ 0.17
LINC00379-201ENST00000427717 FARP1Q9Y4F1 1045 aaPredicted RBP16.1■□□□□ 0.17
LINC00379-201ENST00000427717 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
LINC00379-201ENST00000427717 GABBR2O75899 941 aa16.04■□□□□ 0.16
LINC00379-201ENST00000427717 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
LINC00379-201ENST00000427717 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
LINC00379-201ENST00000427717 DNAJC5Q9H3Z4 198 aa15.99■□□□□ 0.15
LINC00379-201ENST00000427717 CREBZFQ9NS37 354 aa15.99■□□□□ 0.15
LINC00379-201ENST00000427717 POLA1P09884 1462 aaPredicted RBP15.96■□□□□ 0.14
LINC00379-201ENST00000427717 CUX1P39880 1505 aa15.94■□□□□ 0.14
LINC00379-201ENST00000427717 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
LINC00379-201ENST00000427717 WDR97A6NE52 1622 aa15.93■□□□□ 0.14
LINC00379-201ENST00000427717 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
LINC00379-201ENST00000427717 SOGA1O94964 1423 aa15.9■□□□□ 0.14
LINC00379-201ENST00000427717 ZNF608Q9ULD9 1512 aaPredicted RBP15.89■□□□□ 0.13
LINC00379-201ENST00000427717 WRNQ14191 1432 aaPredicted RBP eCLIP15.86■□□□□ 0.13
LINC00379-201ENST00000427717 EIF4G3O43432 1585 aaKnown RBP15.85■□□□□ 0.13
LINC00379-201ENST00000427717 BIVM-ERCC5R4GMW8 1640 aa15.85■□□□□ 0.13
LINC00379-201ENST00000427717 TOP2BQ02880 1626 aa15.84■□□□□ 0.13
LINC00379-201ENST00000427717 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
LINC00379-201ENST00000427717 ZRANB1Q9UGI0 708 aa15.82■□□□□ 0.12
LINC00379-201ENST00000427717 ABCA10Q8WWZ4 1543 aa15.8■□□□□ 0.12
LINC00379-201ENST00000427717 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.12
LINC00379-201ENST00000427717 SYNJ1O43426 1573 aa15.77■□□□□ 0.11
LINC00379-201ENST00000427717 TDRD9Q8NDG6 1382 aaKnown RBP15.76■□□□□ 0.11
LINC00379-201ENST00000427717 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
LINC00379-201ENST00000427717 MAGI1Q96QZ7 1491 aaPredicted RBP15.73■□□□□ 0.11
LINC00379-201ENST00000427717 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
LINC00379-201ENST00000427717 PROM2Q8N271 834 aa15.72■□□□□ 0.11
LINC00379-201ENST00000427717 ZNF579Q8NAF0 562 aaKnown RBP15.72■□□□□ 0.11
LINC00379-201ENST00000427717 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
LINC00379-201ENST00000427717 POTEIP0CG38 1075 aa15.71■□□□□ 0.11
LINC00379-201ENST00000427717 MNX1P50219 401 aaPredicted RBP15.68■□□□□ 0.1
LINC00379-201ENST00000427717 SNAPC4Q5SXM2 1469 aa15.67■□□□□ 0.1
LINC00379-201ENST00000427717 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
LINC00379-201ENST00000427717 NPM1P06748 294 aaKnown RBP eCLIP15.66■□□□□ 0.1
LINC00379-201ENST00000427717 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
LINC00379-201ENST00000427717 PAK3O75914 559 aaPredicted RBP15.64■□□□□ 0.09
LINC00379-201ENST00000427717 PHF12Q96QT6 1004 aa15.64■□□□□ 0.09
LINC00379-201ENST00000427717 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
LINC00379-201ENST00000427717 CHD1O14646 1710 aa15.63■□□□□ 0.09
LINC00379-201ENST00000427717 DCBLD2Q96PD2 775 aa15.63■□□□□ 0.09
LINC00379-201ENST00000427717 LHX8Q68G74 356 aa15.62■□□□□ 0.09
LINC00379-201ENST00000427717 GALR2O43603 387 aaPredicted RBP15.61■□□□□ 0.09
LINC00379-201ENST00000427717 CLCN6P51797 869 aa15.6■□□□□ 0.09
LINC00379-201ENST00000427717 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
LINC00379-201ENST00000427717 FHAD1B1AJZ9 1412 aa15.57■□□□□ 0.08
LINC00379-201ENST00000427717 ADAMTS12P58397 1594 aa15.55■□□□□ 0.08
LINC00379-201ENST00000427717 KIF27Q86VH2 1401 aa15.55■□□□□ 0.08
LINC00379-201ENST00000427717 CLASP1Q7Z460 1538 aa15.53■□□□□ 0.08
LINC00379-201ENST00000427717 GRIN2AQ12879 1464 aa15.52■□□□□ 0.07
LINC00379-201ENST00000427717 TSPYL2Q9H2G4 693 aaPredicted RBP15.49■□□□□ 0.07
LINC00379-201ENST00000427717 NUP160Q12769 1436 aa15.49■□□□□ 0.07
LINC00379-201ENST00000427717 IGF1RP08069 1367 aa15.49■□□□□ 0.07
LINC00379-201ENST00000427717 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
LINC00379-201ENST00000427717 MIER1Q8N108 512 aa15.48■□□□□ 0.07
LINC00379-201ENST00000427717 CUL7Q14999 1698 aa15.48■□□□□ 0.07
LINC00379-201ENST00000427717 RIMBP3CA6NJZ7 1639 aa15.47■□□□□ 0.07
LINC00379-201ENST00000427717 RIMBP3BA6NNM3 1639 aa15.47■□□□□ 0.07
LINC00379-201ENST00000427717 RIMBP3Q9UFD9 1639 aa15.47■□□□□ 0.07
LINC00379-201ENST00000427717 FKBP8Q14318 412 aa15.47■□□□□ 0.07
LINC00379-201ENST00000427717 TRIM41Q8WV44 630 aa15.43■□□□□ 0.06
LINC00379-201ENST00000427717 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
LINC00379-201ENST00000427717 PLEKHG5O94827 1062 aa15.4■□□□□ 0.06
LINC00379-201ENST00000427717 MS4A3Q96HJ5 214 aa15.4■□□□□ 0.06
LINC00379-201ENST00000427717 CARMIL1Q5VZK9 1371 aa15.38■□□□□ 0.05
LINC00379-201ENST00000427717 PLCD3Q8N3E9 789 aa15.38■□□□□ 0.05
LINC00379-201ENST00000427717 SHROOM2Q13796 1616 aa15.36■□□□□ 0.05
LINC00379-201ENST00000427717 ARAP1Q96P48 1450 aa15.34■□□□□ 0.05
LINC00379-201ENST00000427717 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.05
LINC00379-201ENST00000427717 CCDC61Q9Y6R9 512 aa15.33■□□□□ 0.04
LINC00379-201ENST00000427717 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.04
LINC00379-201ENST00000427717 RASEFQ8IZ41 740 aa15.32■□□□□ 0.04
LINC00379-201ENST00000427717 PELP1Q8IZL8 1130 aaKnown RBP15.31■□□□□ 0.04
LINC00379-201ENST00000427717 RAPGEF2Q9Y4G8 1499 aa15.31■□□□□ 0.04
LINC00379-201ENST00000427717 EEA1Q15075 1411 aa15.3■□□□□ 0.04
LINC00379-201ENST00000427717 CYB5RLQ6IPT4 315 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms