RNA–Protein interactions for RNA: ENST00000427717.1

LINC00379-201, long intergenic non-protein coding RNA 379, humanhuman

TSL 2

Gene LINC00379, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00379-201ENST00000427717 AEBP2Q6ZN18 517 aaPredicted RBP31.25■■■□□ 2.59
LINC00379-201ENST00000427717 CHIC1Q5VXU3 224 aa29.61■■■□□ 2.33
LINC00379-201ENST00000427717 SENP3Q9H4L4 574 aaPredicted RBP26.57■■□□□ 1.84
LINC00379-201ENST00000427717 PHF23Q9BUL5 403 aaPredicted RBP26.27■■□□□ 1.8
LINC00379-201ENST00000427717 FOXD1Q16676 465 aa24.82■■□□□ 1.56
LINC00379-201ENST00000427717 PLPPR3Q6T4P5 718 aa23.65■■□□□ 1.38
LINC00379-201ENST00000427717 PPP6R1Q9UPN7 881 aa23.25■■□□□ 1.31
LINC00379-201ENST00000427717 PIAS4Q8N2W9 510 aaPredicted RBP23.23■■□□□ 1.31
LINC00379-201ENST00000427717 ADRA2BP18089 450 aa23.21■■□□□ 1.31
LINC00379-201ENST00000427717 MSH5O43196 834 aa23.14■■□□□ 1.29
LINC00379-201ENST00000427717 POTEDQ86YR6 584 aa22.65■■□□□ 1.22
LINC00379-201ENST00000427717 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
LINC00379-201ENST00000427717 MAPK8IP2Q13387 824 aaPredicted RBP21.33■■□□□ 1.01
LINC00379-201ENST00000427717 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
LINC00379-201ENST00000427717 DMRT2Q9Y5R5 561 aa21.07■□□□□ 0.96
LINC00379-201ENST00000427717 PPP4R3CPQ6ZMV5 832 aa20.78■□□□□ 0.92
LINC00379-201ENST00000427717 DCAF8L1A6NGE4 600 aa20.38■□□□□ 0.85
LINC00379-201ENST00000427717 CNKSR2Q8WXI2 1034 aa20.33■□□□□ 0.85
LINC00379-201ENST00000427717 HOXD11P31277 338 aaPredicted RBP20.27■□□□□ 0.84
LINC00379-201ENST00000427717 RNF216Q9NWF9 866 aaPredicted RBP20.13■□□□□ 0.81
LINC00379-201ENST00000427717 CACNB1Q02641 598 aaPredicted RBP19.95■□□□□ 0.78
LINC00379-201ENST00000427717 NCBP3Q53F19 620 aaKnown RBP19.93■□□□□ 0.78
LINC00379-201ENST00000427717 RNF39Q9H2S5 420 aa19.78■□□□□ 0.76
LINC00379-201ENST00000427717 CCDC180Q9P1Z9 1646 aa19.73■□□□□ 0.75
LINC00379-201ENST00000427717 NPM3O75607 178 aaKnown RBP19.71■□□□□ 0.75
LINC00379-201ENST00000427717 C1QBPQ07021 282 aaKnown RBP19.44■□□□□ 0.7
LINC00379-201ENST00000427717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.43■□□□□ 0.7
LINC00379-201ENST00000427717 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
LINC00379-201ENST00000427717 KCNA4P22459 653 aa19.39■□□□□ 0.69
LINC00379-201ENST00000427717 ABCC9O60706 1549 aa19.18■□□□□ 0.66
LINC00379-201ENST00000427717 U3KPZ7 1027 aaPredicted RBP18.99■□□□□ 0.63
LINC00379-201ENST00000427717 SLC4A2P04920 1241 aa18.82■□□□□ 0.6
LINC00379-201ENST00000427717 SPINK5Q9NQ38 1064 aaPredicted RBP18.77■□□□□ 0.6
LINC00379-201ENST00000427717 CAPN15O75808 1086 aa18.74■□□□□ 0.59
LINC00379-201ENST00000427717 NACADO15069 1562 aa18.56■□□□□ 0.56
LINC00379-201ENST00000427717 RB1CC1Q8TDY2 1594 aa18.56■□□□□ 0.56
LINC00379-201ENST00000427717 DSG3P32926 999 aa18.55■□□□□ 0.56
LINC00379-201ENST00000427717 MYO15BQ96JP2 1530 aa18.53■□□□□ 0.56
LINC00379-201ENST00000427717 TRHP20396 242 aaPredicted RBP18.46■□□□□ 0.55
LINC00379-201ENST00000427717 ZCCHC6Q5VYS8 1495 aaKnown RBP18.42■□□□□ 0.54
LINC00379-201ENST00000427717 DCAF1Q9Y4B6 1507 aa18.4■□□□□ 0.54
LINC00379-201ENST00000427717 ABCB7O75027 752 aa18.36■□□□□ 0.53
LINC00379-201ENST00000427717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
LINC00379-201ENST00000427717 APLP2Q06481 763 aa18.35■□□□□ 0.53
LINC00379-201ENST00000427717 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
LINC00379-201ENST00000427717 DCAF8L2P0C7V8 631 aa18.34■□□□□ 0.53
LINC00379-201ENST00000427717 ZNF219Q9P2Y4 722 aaPredicted RBP18.31■□□□□ 0.52
LINC00379-201ENST00000427717 SAMD1Q6SPF0 538 aaPredicted RBP18.29■□□□□ 0.52
LINC00379-201ENST00000427717 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
LINC00379-201ENST00000427717 MYCNP04198 464 aaPredicted RBP18.19■□□□□ 0.5
LINC00379-201ENST00000427717 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
LINC00379-201ENST00000427717 FOXD4L1Q9NU39 408 aa18.03■□□□□ 0.48
LINC00379-201ENST00000427717 BICRAQ9NZM4 1560 aa17.95■□□□□ 0.46
LINC00379-201ENST00000427717 SHROOM4Q9ULL8 1493 aa17.93■□□□□ 0.46
LINC00379-201ENST00000427717 POLA2Q14181 598 aa17.91■□□□□ 0.46
LINC00379-201ENST00000427717 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC00379-201ENST00000427717 ATF5Q9Y2D1 282 aaPredicted RBP17.87■□□□□ 0.45
LINC00379-201ENST00000427717 SCRIBQ14160 1630 aa17.85■□□□□ 0.45
LINC00379-201ENST00000427717 ZBTB22O15209 634 aa17.84■□□□□ 0.45
LINC00379-201ENST00000427717 POTEHQ6S545 545 aa17.75■□□□□ 0.43
LINC00379-201ENST00000427717 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.41
LINC00379-201ENST00000427717 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
LINC00379-201ENST00000427717 ZBTB12Q9Y330 459 aaPredicted RBP17.45■□□□□ 0.38
LINC00379-201ENST00000427717 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
LINC00379-201ENST00000427717 OSCARQ8IYS5 282 aa17.4■□□□□ 0.38
LINC00379-201ENST00000427717 ATXN8OSP0DMR3 200 aa17.37■□□□□ 0.37
LINC00379-201ENST00000427717 CHRDL2Q6WN34 429 aa17.32■□□□□ 0.36
LINC00379-201ENST00000427717 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
LINC00379-201ENST00000427717 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
LINC00379-201ENST00000427717 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
LINC00379-201ENST00000427717 SMARCA4P51532 1647 aa17.15■□□□□ 0.34
LINC00379-201ENST00000427717 REM2Q8IYK8 340 aaPredicted RBP17.15■□□□□ 0.34
LINC00379-201ENST00000427717 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
LINC00379-201ENST00000427717 SMARCA2P51531 1590 aa17.1■□□□□ 0.33
LINC00379-201ENST00000427717 FBLN2P98095 1184 aa17.09■□□□□ 0.33
LINC00379-201ENST00000427717 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
LINC00379-201ENST00000427717 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
LINC00379-201ENST00000427717 HMGXB3Q12766 1538 aa17.04■□□□□ 0.32
LINC00379-201ENST00000427717 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
LINC00379-201ENST00000427717 PITPNM1O00562 1244 aa17■□□□□ 0.31
LINC00379-201ENST00000427717 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
LINC00379-201ENST00000427717 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
LINC00379-201ENST00000427717 SPDYE2BA6NHP3 402 aa16.94■□□□□ 0.3
LINC00379-201ENST00000427717 SPDYE6P0CI01 402 aa16.94■□□□□ 0.3
LINC00379-201ENST00000427717 SPDYE2Q495Y8 402 aa16.94■□□□□ 0.3
LINC00379-201ENST00000427717 PIP4P2Q8N4L2 257 aa16.93■□□□□ 0.3
LINC00379-201ENST00000427717 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
LINC00379-201ENST00000427717 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
LINC00379-201ENST00000427717 RSF1Q96T23 1441 aaPredicted RBP16.81■□□□□ 0.28
LINC00379-201ENST00000427717 ZNF692Q9BU19 519 aaPredicted RBP16.8■□□□□ 0.28
LINC00379-201ENST00000427717 WIZO95785 1651 aa16.78■□□□□ 0.28
LINC00379-201ENST00000427717 FXR2P51116 673 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC00379-201ENST00000427717 CLEC11AQ9Y240 323 aa16.74■□□□□ 0.27
LINC00379-201ENST00000427717 SSUH2Q9Y2M2 353 aa16.72■□□□□ 0.27
LINC00379-201ENST00000427717 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
LINC00379-201ENST00000427717 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
LINC00379-201ENST00000427717 SPDYE1Q8NFV5 336 aaPredicted RBP16.66■□□□□ 0.26
LINC00379-201ENST00000427717 HAX1O00165 279 aa16.65■□□□□ 0.26
LINC00379-201ENST00000427717 SP7Q8TDD2 431 aaPredicted RBP16.64■□□□□ 0.25
LINC00379-201ENST00000427717 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms