RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
SIRPA-203ENST00000400068 TONSLQ96HA7 1378 aa19.04■□□□□ 0.64
SIRPA-203ENST00000400068 ANP32CO43423 234 aa19.03■□□□□ 0.64
SIRPA-203ENST00000400068 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
SIRPA-203ENST00000400068 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
SIRPA-203ENST00000400068 FHOD3Q2V2M9 1422 aa18.99■□□□□ 0.63
SIRPA-203ENST00000400068 IGF1RP08069 1367 aa18.98■□□□□ 0.63
SIRPA-203ENST00000400068 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
SIRPA-203ENST00000400068 CDK11AQ9UQ88 783 aaPredicted RBP18.97■□□□□ 0.63
SIRPA-203ENST00000400068 FANCD2Q9BXW9 1451 aa18.96■□□□□ 0.63
SIRPA-203ENST00000400068 FGD5Q6ZNL6 1462 aa18.94■□□□□ 0.62
SIRPA-203ENST00000400068 KIF21BO75037 1637 aa18.92■□□□□ 0.62
SIRPA-203ENST00000400068 NESP48681 1621 aa18.92■□□□□ 0.62
SIRPA-203ENST00000400068 RAB3GAP2Q9H2M9 1393 aa18.89■□□□□ 0.62
SIRPA-203ENST00000400068 FHAD1B1AJZ9 1412 aa18.89■□□□□ 0.61
SIRPA-203ENST00000400068 CUX1P39880 1505 aa18.88■□□□□ 0.61
SIRPA-203ENST00000400068 CFTRP13569 1480 aa18.87■□□□□ 0.61
SIRPA-203ENST00000400068 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
SIRPA-203ENST00000400068 FOXD1Q16676 465 aa18.84■□□□□ 0.61
SIRPA-203ENST00000400068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.61
SIRPA-203ENST00000400068 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.6
SIRPA-203ENST00000400068 SENP3-EIF4A1A0A087X0R7 540 aa18.82■□□□□ 0.6
SIRPA-203ENST00000400068 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
SIRPA-203ENST00000400068 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
SIRPA-203ENST00000400068 DHX57Q6P158 1386 aaKnown RBP18.81■□□□□ 0.6
SIRPA-203ENST00000400068 KDM2AQ9Y2K7 1162 aa18.81■□□□□ 0.6
SIRPA-203ENST00000400068 TOP2BQ02880 1626 aa18.8■□□□□ 0.6
SIRPA-203ENST00000400068 KCNH8Q96L42 1107 aa18.79■□□□□ 0.6
SIRPA-203ENST00000400068 SETD5Q9C0A6 1442 aa18.79■□□□□ 0.6
SIRPA-203ENST00000400068 EIF5BO60841 1220 aaKnown RBP18.78■□□□□ 0.6
SIRPA-203ENST00000400068 PRXQ9BXM0 1461 aa18.77■□□□□ 0.6
SIRPA-203ENST00000400068 CFDP1Q9UEE9 299 aaPredicted RBP18.77■□□□□ 0.6
SIRPA-203ENST00000400068 FKBP8Q14318 412 aa18.76■□□□□ 0.59
SIRPA-203ENST00000400068 CC2D2AQ9P2K1 1620 aa18.76■□□□□ 0.59
SIRPA-203ENST00000400068 HNRNPUQ00839 825 aaKnown RBP eCLIP18.76■□□□□ 0.59
SIRPA-203ENST00000400068 FAM9BQ8IZU0 186 aa18.76■□□□□ 0.59
SIRPA-203ENST00000400068 ARHGAP35Q9NRY4 1499 aa18.75■□□□□ 0.59
SIRPA-203ENST00000400068 CLSPNQ9HAW4 1339 aa18.74■□□□□ 0.59
SIRPA-203ENST00000400068 PEG3Q9GZU2 1588 aa18.73■□□□□ 0.59
SIRPA-203ENST00000400068 HMGXB3Q12766 1538 aa18.72■□□□□ 0.59
SIRPA-203ENST00000400068 PLEKHD1A6NEE1 506 aa18.71■□□□□ 0.59
SIRPA-203ENST00000400068 TSPY4P0CV99 314 aa18.71■□□□□ 0.59
SIRPA-203ENST00000400068 TSPY10P0CW01 314 aa18.71■□□□□ 0.59
SIRPA-203ENST00000400068 PHLDB1Q86UU1 1377 aa18.7■□□□□ 0.58
SIRPA-203ENST00000400068 IRX6P78412 446 aaPredicted RBP18.68■□□□□ 0.58
SIRPA-203ENST00000400068 FMN1Q68DA7 1419 aa18.67■□□□□ 0.58
SIRPA-203ENST00000400068 AQRO60306 1485 aaKnown RBP eCLIP18.65■□□□□ 0.58
SIRPA-203ENST00000400068 RGL3Q3MIN7 710 aa18.65■□□□□ 0.58
SIRPA-203ENST00000400068 EIF4G2P78344 907 aaKnown RBP eCLIP18.65■□□□□ 0.58
SIRPA-203ENST00000400068 SALL2Q9Y467 1007 aaPredicted RBP18.64■□□□□ 0.58
SIRPA-203ENST00000400068 GAPVD1Q14C86 1478 aa18.63■□□□□ 0.57
SIRPA-203ENST00000400068 ERICH3Q5RHP9 1530 aa18.62■□□□□ 0.57
SIRPA-203ENST00000400068 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
SIRPA-203ENST00000400068 POLA1P09884 1462 aaPredicted RBP18.6■□□□□ 0.57
SIRPA-203ENST00000400068 MRS2Q9HD23 443 aa18.58■□□□□ 0.57
SIRPA-203ENST00000400068 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
SIRPA-203ENST00000400068 PPP1R15AO75807 674 aaPredicted RBP18.57■□□□□ 0.56
SIRPA-203ENST00000400068 LRRC9Q6ZRR7 1453 aa18.55■□□□□ 0.56
SIRPA-203ENST00000400068 ZNF644Q9H582 1327 aaPredicted RBP18.54■□□□□ 0.56
SIRPA-203ENST00000400068 CHGAP10645 457 aaKnown RBP18.54■□□□□ 0.56
SIRPA-203ENST00000400068 MPHOSPH9Q99550 1183 aa18.54■□□□□ 0.56
SIRPA-203ENST00000400068 HSPA5P11021 654 aaKnown RBP18.51■□□□□ 0.55
SIRPA-203ENST00000400068 JPH4Q96JJ6 628 aa18.5■□□□□ 0.55
SIRPA-203ENST00000400068 L3MBTL2Q969R5 705 aa18.47■□□□□ 0.55
SIRPA-203ENST00000400068 RRBP1Q9P2E9 1410 aaKnown RBP18.47■□□□□ 0.55
SIRPA-203ENST00000400068 PKD2Q13563 968 aa18.46■□□□□ 0.55
SIRPA-203ENST00000400068 HNRNPMP52272 730 aaKnown RBP eCLIP18.44■□□□□ 0.54
SIRPA-203ENST00000400068 TMC1Q8TDI8 760 aa18.43■□□□□ 0.54
SIRPA-203ENST00000400068 SUPT16HQ9Y5B9 1047 aaKnown RBP18.43■□□□□ 0.54
SIRPA-203ENST00000400068 FGD6Q6ZV73 1430 aa18.43■□□□□ 0.54
SIRPA-203ENST00000400068 BIVM-ERCC5R4GMW8 1640 aa18.42■□□□□ 0.54
SIRPA-203ENST00000400068 CARD11Q9BXL7 1154 aa18.42■□□□□ 0.54
SIRPA-203ENST00000400068 DCAF11Q8TEB1 546 aa18.41■□□□□ 0.54
SIRPA-203ENST00000400068 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
SIRPA-203ENST00000400068 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
SIRPA-203ENST00000400068 CASKIN1Q8WXD9 1431 aa18.39■□□□□ 0.53
SIRPA-203ENST00000400068 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
SIRPA-203ENST00000400068 TIAM1Q13009 1591 aa18.36■□□□□ 0.53
SIRPA-203ENST00000400068 NPM1P06748 294 aaKnown RBP eCLIP18.36■□□□□ 0.53
SIRPA-203ENST00000400068 NCOA2Q15596 1464 aa18.35■□□□□ 0.53
SIRPA-203ENST00000400068 CARMIL2Q6F5E8 1435 aa18.34■□□□□ 0.53
SIRPA-203ENST00000400068 URB2Q14146 1524 aaKnown RBP18.34■□□□□ 0.53
SIRPA-203ENST00000400068 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.52
SIRPA-203ENST00000400068 MYOM3Q5VTT5 1437 aa18.33■□□□□ 0.52
SIRPA-203ENST00000400068 NUP155O75694 1391 aa18.33■□□□□ 0.52
SIRPA-203ENST00000400068 PCF11O94913 1555 aaKnown RBP18.3■□□□□ 0.52
SIRPA-203ENST00000400068 FYCO1Q9BQS8 1478 aa18.29■□□□□ 0.52
SIRPA-203ENST00000400068 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.52
SIRPA-203ENST00000400068 PRDM2Q13029 1718 aa18.26■□□□□ 0.51
SIRPA-203ENST00000400068 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
SIRPA-203ENST00000400068 CDK13Q14004 1512 aaKnown RBP18.22■□□□□ 0.51
SIRPA-203ENST00000400068 CC2D1BQ5T0F9 858 aaKnown RBP18.22■□□□□ 0.51
SIRPA-203ENST00000400068 ANKRD30AQ9BXX3 1397 aa18.21■□□□□ 0.51
SIRPA-203ENST00000400068 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
SIRPA-203ENST00000400068 DAXXQ9UER7 740 aaPredicted RBP18.2■□□□□ 0.5
SIRPA-203ENST00000400068 ZNF608Q9ULD9 1512 aaPredicted RBP18.2■□□□□ 0.5
SIRPA-203ENST00000400068 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
SIRPA-203ENST00000400068 UACAQ9BZF9 1416 aa18.19■□□□□ 0.5
SIRPA-203ENST00000400068 PRG4Q92954 1404 aaPredicted RBP18.18■□□□□ 0.5
SIRPA-203ENST00000400068 WDR97A6NE52 1622 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms