RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
NIFKP1-201ENST00000398317 SNAPC4Q5SXM2 1469 aa17.71■□□□□ 0.43
NIFKP1-201ENST00000398317 FOXD4L1Q9NU39 408 aa17.71■□□□□ 0.43
NIFKP1-201ENST00000398317 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
NIFKP1-201ENST00000398317 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
NIFKP1-201ENST00000398317 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
NIFKP1-201ENST00000398317 GRIN2BQ13224 1484 aa17.64■□□□□ 0.41
NIFKP1-201ENST00000398317 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
NIFKP1-201ENST00000398317 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
NIFKP1-201ENST00000398317 PBRM1Q86U86 1689 aa17.61■□□□□ 0.41
NIFKP1-201ENST00000398317 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
NIFKP1-201ENST00000398317 CLASP1Q7Z460 1538 aa17.6■□□□□ 0.41
NIFKP1-201ENST00000398317 SYNJ1O43426 1573 aa17.59■□□□□ 0.41
NIFKP1-201ENST00000398317 SYNJ2O15056 1496 aa17.58■□□□□ 0.41
NIFKP1-201ENST00000398317 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
NIFKP1-201ENST00000398317 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
NIFKP1-201ENST00000398317 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
NIFKP1-201ENST00000398317 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
NIFKP1-201ENST00000398317 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
NIFKP1-201ENST00000398317 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
NIFKP1-201ENST00000398317 BIVM-ERCC5R4GMW8 1640 aa17.48■□□□□ 0.39
NIFKP1-201ENST00000398317 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
NIFKP1-201ENST00000398317 ADAMTS12P58397 1594 aa17.42■□□□□ 0.38
NIFKP1-201ENST00000398317 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
NIFKP1-201ENST00000398317 GRIN2AQ12879 1464 aa17.42■□□□□ 0.38
NIFKP1-201ENST00000398317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.4■□□□□ 0.38
NIFKP1-201ENST00000398317 CAPN15O75808 1086 aa17.4■□□□□ 0.38
NIFKP1-201ENST00000398317 HNRNPUL2Q1KMD3 747 aaKnown RBP17.4■□□□□ 0.38
NIFKP1-201ENST00000398317 CEP170Q5SW79 1584 aa17.38■□□□□ 0.37
NIFKP1-201ENST00000398317 ERCC6L2Q5T890 1561 aa17.37■□□□□ 0.37
NIFKP1-201ENST00000398317 SAMD1Q6SPF0 538 aaPredicted RBP17.37■□□□□ 0.37
NIFKP1-201ENST00000398317 FHAD1B1AJZ9 1412 aa17.36■□□□□ 0.37
NIFKP1-201ENST00000398317 NUP160Q12769 1436 aa17.36■□□□□ 0.37
NIFKP1-201ENST00000398317 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
NIFKP1-201ENST00000398317 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
NIFKP1-201ENST00000398317 APLP2Q06481 763 aa17.25■□□□□ 0.35
NIFKP1-201ENST00000398317 ATF5Q9Y2D1 282 aaPredicted RBP17.24■□□□□ 0.35
NIFKP1-201ENST00000398317 PRG4Q92954 1404 aaPredicted RBP17.21■□□□□ 0.35
NIFKP1-201ENST00000398317 JPH4Q96JJ6 628 aa17.21■□□□□ 0.35
NIFKP1-201ENST00000398317 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
NIFKP1-201ENST00000398317 IGF1RP08069 1367 aa17.15■□□□□ 0.34
NIFKP1-201ENST00000398317 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
NIFKP1-201ENST00000398317 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
NIFKP1-201ENST00000398317 ABCB7O75027 752 aa17.12■□□□□ 0.33
NIFKP1-201ENST00000398317 DSG3P32926 999 aa17.11■□□□□ 0.33
NIFKP1-201ENST00000398317 CUL7Q14999 1698 aa17.1■□□□□ 0.33
NIFKP1-201ENST00000398317 KIF13AQ9H1H9 1805 aa17.09■□□□□ 0.33
NIFKP1-201ENST00000398317 KIAA0586Q9BVV6 1533 aa17.07■□□□□ 0.32
NIFKP1-201ENST00000398317 CARMIL1Q5VZK9 1371 aa17.04■□□□□ 0.32
NIFKP1-201ENST00000398317 NPM1P06748 294 aaKnown RBP eCLIP17.02■□□□□ 0.32
NIFKP1-201ENST00000398317 ADCY10Q96PN6 1610 aa17.02■□□□□ 0.31
NIFKP1-201ENST00000398317 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
NIFKP1-201ENST00000398317 TTBK1Q5TCY1 1321 aaPredicted RBP16.98■□□□□ 0.31
NIFKP1-201ENST00000398317 ATXN8OSP0DMR3 200 aa16.98■□□□□ 0.31
NIFKP1-201ENST00000398317 ABCC10Q5T3U5 1492 aa16.97■□□□□ 0.31
NIFKP1-201ENST00000398317 MAPKBP1O60336 1514 aa16.96■□□□□ 0.3
NIFKP1-201ENST00000398317 PTPRGP23470 1445 aa16.94■□□□□ 0.3
NIFKP1-201ENST00000398317 DIP2BQ9P265 1576 aa16.94■□□□□ 0.3
NIFKP1-201ENST00000398317 IQGAP2Q13576 1575 aa16.92■□□□□ 0.3
NIFKP1-201ENST00000398317 POLA2Q14181 598 aa16.91■□□□□ 0.3
NIFKP1-201ENST00000398317 TSPOAP1O95153 1857 aa16.9■□□□□ 0.3
NIFKP1-201ENST00000398317 CARMIL2Q6F5E8 1435 aa16.9■□□□□ 0.3
NIFKP1-201ENST00000398317 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.3
NIFKP1-201ENST00000398317 RAPGEF2Q9Y4G8 1499 aa16.86■□□□□ 0.29
NIFKP1-201ENST00000398317 DISP1Q96F81 1524 aa16.85■□□□□ 0.29
NIFKP1-201ENST00000398317 ABCC2Q92887 1545 aa16.83■□□□□ 0.28
NIFKP1-201ENST00000398317 UGGT2Q9NYU1 1516 aa16.8■□□□□ 0.28
NIFKP1-201ENST00000398317 UACAQ9BZF9 1416 aa16.8■□□□□ 0.28
NIFKP1-201ENST00000398317 KDM6BO15054 1643 aa16.8■□□□□ 0.28
NIFKP1-201ENST00000398317 ASXL2Q76L83 1435 aa16.79■□□□□ 0.28
NIFKP1-201ENST00000398317 UHRF1BP1LA0JNW5 1464 aa16.79■□□□□ 0.28
NIFKP1-201ENST00000398317 KIAA0556O60303 1618 aa16.77■□□□□ 0.27
NIFKP1-201ENST00000398317 PLB1Q6P1J6 1458 aa16.76■□□□□ 0.27
NIFKP1-201ENST00000398317 CTTNBP2Q8WZ74 1663 aa16.75■□□□□ 0.27
NIFKP1-201ENST00000398317 PPRC1Q5VV67 1664 aaKnown RBP16.73■□□□□ 0.27
NIFKP1-201ENST00000398317 GLI2P10070 1586 aa16.72■□□□□ 0.27
NIFKP1-201ENST00000398317 KDM5BQ9UGL1 1544 aa16.72■□□□□ 0.27
NIFKP1-201ENST00000398317 ZCCHC11Q5TAX3 1644 aaKnown RBP16.72■□□□□ 0.27
NIFKP1-201ENST00000398317 EPRSP07814 1512 aaKnown RBP16.69■□□□□ 0.26
NIFKP1-201ENST00000398317 PRXQ9BXM0 1461 aa16.68■□□□□ 0.26
NIFKP1-201ENST00000398317 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
NIFKP1-201ENST00000398317 MAP3K4Q9Y6R4 1608 aa16.65■□□□□ 0.26
NIFKP1-201ENST00000398317 GOLGA3Q08378 1498 aa16.65■□□□□ 0.26
NIFKP1-201ENST00000398317 ABCA8O94911 1581 aa16.62■□□□□ 0.25
NIFKP1-201ENST00000398317 COL17A1Q9UMD9 1497 aaPredicted RBP16.61■□□□□ 0.25
NIFKP1-201ENST00000398317 WDR7Q9Y4E6 1490 aa16.61■□□□□ 0.25
NIFKP1-201ENST00000398317 P3H3Q8IVL6 736 aa16.6■□□□□ 0.25
NIFKP1-201ENST00000398317 KCNH8Q96L42 1107 aa16.59■□□□□ 0.25
NIFKP1-201ENST00000398317 TEX14Q8IWB6 1497 aa16.59■□□□□ 0.25
NIFKP1-201ENST00000398317 ARID3CA6NKF2 412 aa16.56■□□□□ 0.24
NIFKP1-201ENST00000398317 CD109Q6YHK3 1445 aa16.53■□□□□ 0.24
NIFKP1-201ENST00000398317 CFAP43Q8NDM7 1665 aa16.53■□□□□ 0.24
NIFKP1-201ENST00000398317 ADGRL1O94910 1474 aa16.51■□□□□ 0.23
NIFKP1-201ENST00000398317 RANGAP1P46060 587 aaPredicted RBP16.5■□□□□ 0.23
NIFKP1-201ENST00000398317 FAM9AQ8IZU1 332 aaPredicted RBP16.5■□□□□ 0.23
NIFKP1-201ENST00000398317 ATP10BO94823 1461 aa16.49■□□□□ 0.23
NIFKP1-201ENST00000398317 SAMD9Q5K651 1589 aa16.49■□□□□ 0.23
NIFKP1-201ENST00000398317 MAGI3Q5TCQ9 1506 aa16.49■□□□□ 0.23
NIFKP1-201ENST00000398317 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
NIFKP1-201ENST00000398317 RAPGEF6Q8TEU7 1601 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms