RNA–Protein interactions for RNA: ENST00000392995.7

PPM1D-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 2

Gene PPM1D, Length 2,996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-202ENST00000392995 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
PPM1D-202ENST00000392995 ABCA10Q8WWZ4 1543 aa21.66■■□□□ 1.06
PPM1D-202ENST00000392995 APLP2Q06481 763 aa21.63■■□□□ 1.05
PPM1D-202ENST00000392995 ANP32EQ9BTT0 268 aa21.57■■□□□ 1.04
PPM1D-202ENST00000392995 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
PPM1D-202ENST00000392995 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
PPM1D-202ENST00000392995 VPS8Q8N3P4 1428 aa21.54■■□□□ 1.04
PPM1D-202ENST00000392995 ARAP1Q96P48 1450 aa21.51■■□□□ 1.03
PPM1D-202ENST00000392995 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
PPM1D-202ENST00000392995 P3H3Q8IVL6 736 aa21.51■■□□□ 1.03
PPM1D-202ENST00000392995 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.03
PPM1D-202ENST00000392995 WDR97A6NE52 1622 aa21.49■■□□□ 1.03
PPM1D-202ENST00000392995 ITGAEP38570 1179 aa21.49■■□□□ 1.03
PPM1D-202ENST00000392995 BCL11AQ9H165 835 aa21.48■■□□□ 1.03
PPM1D-202ENST00000392995 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
PPM1D-202ENST00000392995 ARHGAP35Q9NRY4 1499 aa21.46■■□□□ 1.03
PPM1D-202ENST00000392995 DHX57Q6P158 1386 aaKnown RBP21.44■■□□□ 1.02
PPM1D-202ENST00000392995 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
PPM1D-202ENST00000392995 ZNF608Q9ULD9 1512 aaPredicted RBP21.43■■□□□ 1.02
PPM1D-202ENST00000392995 FKBP8Q14318 412 aa21.42■■□□□ 1.02
PPM1D-202ENST00000392995 KANK4Q5T7N3 995 aaPredicted RBP21.4■■□□□ 1.02
PPM1D-202ENST00000392995 WDR62O43379 1518 aa21.38■■□□□ 1.01
PPM1D-202ENST00000392995 CUL7Q14999 1698 aa21.35■■□□□ 1.01
PPM1D-202ENST00000392995 HIRIP3Q9BW71 556 aaPredicted RBP21.32■■□□□ 1
PPM1D-202ENST00000392995 CLSPNQ9HAW4 1339 aa21.32■■□□□ 1
PPM1D-202ENST00000392995 ATP1B4Q9UN42 357 aaPredicted RBP21.31■■□□□ 1
PPM1D-202ENST00000392995 THOC2Q8NI27 1593 aaKnown RBP21.3■■□□□ 1
PPM1D-202ENST00000392995 IFT140Q96RY7 1462 aa21.3■■□□□ 1
PPM1D-202ENST00000392995 DDX10Q13206 875 aaKnown RBP21.3■■□□□ 1
PPM1D-202ENST00000392995 FHOD3Q2V2M9 1422 aa21.29■■□□□ 1
PPM1D-202ENST00000392995 TRIM52Q96A61 297 aa21.26■□□□□ 0.99
PPM1D-202ENST00000392995 PBRM1Q86U86 1689 aa21.25■□□□□ 0.99
PPM1D-202ENST00000392995 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
PPM1D-202ENST00000392995 RBM19Q9Y4C8 960 aaKnown RBP21.24■□□□□ 0.99
PPM1D-202ENST00000392995 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
PPM1D-202ENST00000392995 FBLN2P98095 1184 aa21.2■□□□□ 0.98
PPM1D-202ENST00000392995 CTTNBP2Q8WZ74 1663 aa21.19■□□□□ 0.98
PPM1D-202ENST00000392995 EIF4G3O43432 1585 aaKnown RBP21.18■□□□□ 0.98
PPM1D-202ENST00000392995 SNAPC4Q5SXM2 1469 aa21.18■□□□□ 0.98
PPM1D-202ENST00000392995 ADAMTS12P58397 1594 aa21.17■□□□□ 0.98
PPM1D-202ENST00000392995 SIN3AQ96ST3 1273 aa21.16■□□□□ 0.98
PPM1D-202ENST00000392995 PCF11O94913 1555 aaKnown RBP21.1■□□□□ 0.97
PPM1D-202ENST00000392995 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
PPM1D-202ENST00000392995 MSH5O43196 834 aa21.09■□□□□ 0.97
PPM1D-202ENST00000392995 IRX6P78412 446 aaPredicted RBP21.08■□□□□ 0.97
PPM1D-202ENST00000392995 NEFLP07196 543 aa21.07■□□□□ 0.96
PPM1D-202ENST00000392995 EFCAB5A4FU69 1503 aa21.07■□□□□ 0.96
PPM1D-202ENST00000392995 ARID3CA6NKF2 412 aa21.05■□□□□ 0.96
PPM1D-202ENST00000392995 TIAM1Q13009 1591 aa21.03■□□□□ 0.96
PPM1D-202ENST00000392995 GRIN2AQ12879 1464 aa21.02■□□□□ 0.96
PPM1D-202ENST00000392995 SAMD9Q5K651 1589 aa21.01■□□□□ 0.95
PPM1D-202ENST00000392995 IQGAP2Q13576 1575 aa21.01■□□□□ 0.95
PPM1D-202ENST00000392995 RAB3GAP2Q9H2M9 1393 aa21■□□□□ 0.95
PPM1D-202ENST00000392995 FMN1Q68DA7 1419 aa20.99■□□□□ 0.95
PPM1D-202ENST00000392995 CASKIN1Q8WXD9 1431 aa20.99■□□□□ 0.95
PPM1D-202ENST00000392995 CCNB3Q8WWL7 1395 aa20.99■□□□□ 0.95
PPM1D-202ENST00000392995 LRRC9Q6ZRR7 1453 aa20.99■□□□□ 0.95
PPM1D-202ENST00000392995 MAGI1Q96QZ7 1491 aaPredicted RBP20.96■□□□□ 0.95
PPM1D-202ENST00000392995 FYCO1Q9BQS8 1478 aa20.96■□□□□ 0.95
PPM1D-202ENST00000392995 SYNJ2O15056 1496 aa20.95■□□□□ 0.94
PPM1D-202ENST00000392995 PHLDB1Q86UU1 1377 aa20.95■□□□□ 0.94
PPM1D-202ENST00000392995 PPP1R15AO75807 674 aaPredicted RBP20.94■□□□□ 0.94
PPM1D-202ENST00000392995 FAM50AQ14320 339 aaKnown RBP20.94■□□□□ 0.94
PPM1D-202ENST00000392995 KIAA0586Q9BVV6 1533 aa20.93■□□□□ 0.94
PPM1D-202ENST00000392995 RRBP1Q9P2E9 1410 aaKnown RBP20.92■□□□□ 0.94
PPM1D-202ENST00000392995 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
PPM1D-202ENST00000392995 MAP3K1Q13233 1512 aa20.9■□□□□ 0.94
PPM1D-202ENST00000392995 ANP32CO43423 234 aa20.89■□□□□ 0.93
PPM1D-202ENST00000392995 MAPKBP1O60336 1514 aa20.88■□□□□ 0.93
PPM1D-202ENST00000392995 CFAP43Q8NDM7 1665 aa20.87■□□□□ 0.93
PPM1D-202ENST00000392995 LRRIQ1Q96JM4 1722 aa20.87■□□□□ 0.93
PPM1D-202ENST00000392995 DISP1Q96F81 1524 aa20.87■□□□□ 0.93
PPM1D-202ENST00000392995 JPH4Q96JJ6 628 aa20.86■□□□□ 0.93
PPM1D-202ENST00000392995 UGGT2Q9NYU1 1516 aa20.86■□□□□ 0.93
PPM1D-202ENST00000392995 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
PPM1D-202ENST00000392995 ERICH6Q7L0X2 663 aa20.81■□□□□ 0.92
PPM1D-202ENST00000392995 HNRNPUQ00839 825 aaKnown RBP eCLIP20.8■□□□□ 0.92
PPM1D-202ENST00000392995 NUP160Q12769 1436 aa20.8■□□□□ 0.92
PPM1D-202ENST00000392995 KIAA0556O60303 1618 aa20.8■□□□□ 0.92
PPM1D-202ENST00000392995 CDK13Q14004 1512 aaKnown RBP20.79■□□□□ 0.92
PPM1D-202ENST00000392995 MAGI3Q5TCQ9 1506 aa20.77■□□□□ 0.92
PPM1D-202ENST00000392995 SETD5Q9C0A6 1442 aa20.76■□□□□ 0.91
PPM1D-202ENST00000392995 EPRSP07814 1512 aaKnown RBP20.74■□□□□ 0.91
PPM1D-202ENST00000392995 CDK11AQ9UQ88 783 aaPredicted RBP20.74■□□□□ 0.91
PPM1D-202ENST00000392995 CCER2I3L3R5 266 aa20.73■□□□□ 0.91
PPM1D-202ENST00000392995 PLB1Q6P1J6 1458 aa20.72■□□□□ 0.91
PPM1D-202ENST00000392995 NCOA2Q15596 1464 aa20.71■□□□□ 0.91
PPM1D-202ENST00000392995 HECW1Q76N89 1606 aa20.7■□□□□ 0.9
PPM1D-202ENST00000392995 CHD1O14646 1710 aa20.68■□□□□ 0.9
PPM1D-202ENST00000392995 NUP153P49790 1475 aaKnown RBP20.68■□□□□ 0.9
PPM1D-202ENST00000392995 CARMIL2Q6F5E8 1435 aa20.66■□□□□ 0.9
PPM1D-202ENST00000392995 FGD6Q6ZV73 1430 aa20.66■□□□□ 0.9
PPM1D-202ENST00000392995 CCDC18Q5T9S5 1454 aa20.66■□□□□ 0.9
PPM1D-202ENST00000392995 PRG4Q92954 1404 aaPredicted RBP20.65■□□□□ 0.9
PPM1D-202ENST00000392995 B4GALNT3Q6L9W6 998 aa20.64■□□□□ 0.9
PPM1D-202ENST00000392995 CCDC184Q52MB2 194 aa20.64■□□□□ 0.89
PPM1D-202ENST00000392995 EHBP1L1Q8N3D4 1523 aa20.62■□□□□ 0.89
PPM1D-202ENST00000392995 FANCIQ9NVI1 1328 aa20.62■□□□□ 0.89
PPM1D-202ENST00000392995 NBR1Q14596 966 aa20.62■□□□□ 0.89
PPM1D-202ENST00000392995 RAPGEF6Q8TEU7 1601 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms