RNA–Protein interactions for RNA: ENST00000392088.6

TUBA4A-202, Transcript of tubulin alpha 4a, humanhuman

TSL 2 BASIC

Gene TUBA4A, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-202ENST00000392088 SETD5Q9C0A6 1442 aa28.36■■■□□ 2.13
TUBA4A-202ENST00000392088 KCNH8Q96L42 1107 aa28.35■■■□□ 2.13
TUBA4A-202ENST00000392088 CADPSQ9ULU8 1353 aa28.32■■■□□ 2.12
TUBA4A-202ENST00000392088 SIN3AQ96ST3 1273 aa28.28■■■□□ 2.12
TUBA4A-202ENST00000392088 WDR97A6NE52 1622 aa28.27■■■□□ 2.12
TUBA4A-202ENST00000392088 CFAP43Q8NDM7 1665 aa28.27■■■□□ 2.12
TUBA4A-202ENST00000392088 PCF11O94913 1555 aaKnown RBP28.27■■■□□ 2.12
TUBA4A-202ENST00000392088 FAM50AQ14320 339 aaKnown RBP28.27■■■□□ 2.12
TUBA4A-202ENST00000392088 P3H3Q8IVL6 736 aa28.27■■■□□ 2.12
TUBA4A-202ENST00000392088 FHAD1B1AJZ9 1412 aa28.22■■■□□ 2.11
TUBA4A-202ENST00000392088 ATP1B4Q9UN42 357 aaPredicted RBP28.17■■■□□ 2.1
TUBA4A-202ENST00000392088 DDX10Q13206 875 aaKnown RBP28.16■■■□□ 2.1
TUBA4A-202ENST00000392088 FHOD3Q2V2M9 1422 aa28.14■■■□□ 2.1
TUBA4A-202ENST00000392088 RAD54L2Q9Y4B4 1467 aa28.09■■■□□ 2.09
TUBA4A-202ENST00000392088 FANCD2Q9BXW9 1451 aa28.08■■■□□ 2.09
TUBA4A-202ENST00000392088 TSHZ2Q9NRE2 1034 aa28.07■■■□□ 2.08
TUBA4A-202ENST00000392088 PPP1R15AO75807 674 aaPredicted RBP28.06■■■□□ 2.08
TUBA4A-202ENST00000392088 HIRIP3Q9BW71 556 aaPredicted RBP28.05■■■□□ 2.08
TUBA4A-202ENST00000392088 FYCO1Q9BQS8 1478 aa28.05■■■□□ 2.08
TUBA4A-202ENST00000392088 CASKIN1Q8WXD9 1431 aa28.02■■■□□ 2.08
TUBA4A-202ENST00000392088 ABCA10Q8WWZ4 1543 aa28■■■□□ 2.07
TUBA4A-202ENST00000392088 TIMELESSQ9UNS1 1208 aa28■■■□□ 2.07
TUBA4A-202ENST00000392088 EFCAB5A4FU69 1503 aa28■■■□□ 2.07
TUBA4A-202ENST00000392088 DNMBPQ6XZF7 1577 aa28■■■□□ 2.07
TUBA4A-202ENST00000392088 CC2D2AQ9P2K1 1620 aa27.98■■■□□ 2.07
TUBA4A-202ENST00000392088 POLA1P09884 1462 aaPredicted RBP27.98■■■□□ 2.07
TUBA4A-202ENST00000392088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.97■■■□□ 2.07
TUBA4A-202ENST00000392088 CTTNBP2Q8WZ74 1663 aa27.97■■■□□ 2.07
TUBA4A-202ENST00000392088 AQRO60306 1485 aaKnown RBP eCLIP27.96■■■□□ 2.07
TUBA4A-202ENST00000392088 TOPBP1Q92547 1522 aa27.95■■■□□ 2.06
TUBA4A-202ENST00000392088 BCANQ96GW7 911 aa27.94■■■□□ 2.06
TUBA4A-202ENST00000392088 FGD6Q6ZV73 1430 aa27.92■■■□□ 2.06
TUBA4A-202ENST00000392088 CUL7Q14999 1698 aa27.91■■■□□ 2.06
TUBA4A-202ENST00000392088 FKBP8Q14318 412 aa27.89■■■□□ 2.05
TUBA4A-202ENST00000392088 PTPRKQ15262 1439 aa27.88■■■□□ 2.05
TUBA4A-202ENST00000392088 SNAPC4Q5SXM2 1469 aa27.88■■■□□ 2.05
TUBA4A-202ENST00000392088 NESP48681 1621 aa27.86■■■□□ 2.05
TUBA4A-202ENST00000392088 CCDC18Q5T9S5 1454 aa27.86■■■□□ 2.05
TUBA4A-202ENST00000392088 LRRIQ1Q96JM4 1722 aa27.85■■■□□ 2.05
TUBA4A-202ENST00000392088 FMN1Q68DA7 1419 aa27.84■■■□□ 2.05
TUBA4A-202ENST00000392088 CCER2I3L3R5 266 aa27.82■■■□□ 2.04
TUBA4A-202ENST00000392088 TONSLQ96HA7 1378 aa27.81■■■□□ 2.04
TUBA4A-202ENST00000392088 ANP32CO43423 234 aa27.8■■■□□ 2.04
TUBA4A-202ENST00000392088 TRIM52Q96A61 297 aa27.8■■■□□ 2.04
TUBA4A-202ENST00000392088 MTUS2Q5JR59 1369 aa27.8■■■□□ 2.04
TUBA4A-202ENST00000392088 PTPN23Q9H3S7 1636 aa27.8■■■□□ 2.04
TUBA4A-202ENST00000392088 HFM1A2PYH4 1435 aa27.78■■■□□ 2.04
TUBA4A-202ENST00000392088 UACAQ9BZF9 1416 aa27.77■■■□□ 2.04
TUBA4A-202ENST00000392088 SAMD9Q5K651 1589 aa27.74■■■□□ 2.03
TUBA4A-202ENST00000392088 NAIPQ13075 1403 aa27.72■■■□□ 2.03
TUBA4A-202ENST00000392088 NCOA2Q15596 1464 aa27.72■■■□□ 2.03
TUBA4A-202ENST00000392088 URB2Q14146 1524 aaKnown RBP27.69■■■□□ 2.02
TUBA4A-202ENST00000392088 GRIN2BQ13224 1484 aa27.69■■■□□ 2.02
TUBA4A-202ENST00000392088 MYOM3Q5VTT5 1437 aa27.69■■■□□ 2.02
TUBA4A-202ENST00000392088 TDRD9Q8NDG6 1382 aaKnown RBP27.68■■■□□ 2.02
TUBA4A-202ENST00000392088 KDM5BQ9UGL1 1544 aa27.68■■■□□ 2.02
TUBA4A-202ENST00000392088 ABCA5Q8WWZ7 1642 aa27.66■■■□□ 2.02
TUBA4A-202ENST00000392088 SUPT6HQ7KZ85 1726 aaKnown RBP27.65■■■□□ 2.02
TUBA4A-202ENST00000392088 NEFLP07196 543 aa27.64■■■□□ 2.01
TUBA4A-202ENST00000392088 ANP32EQ9BTT0 268 aa27.61■■■□□ 2.01
TUBA4A-202ENST00000392088 EHBP1L1Q8N3D4 1523 aa27.6■■■□□ 2.01
TUBA4A-202ENST00000392088 MAGI3Q5TCQ9 1506 aa27.59■■■□□ 2.01
TUBA4A-202ENST00000392088 GAPVD1Q14C86 1478 aa27.59■■■□□ 2.01
TUBA4A-202ENST00000392088 THOC2Q8NI27 1593 aaKnown RBP27.58■■■□□ 2.01
TUBA4A-202ENST00000392088 UGGT2Q9NYU1 1516 aa27.57■■■□□ 2
TUBA4A-202ENST00000392088 RRP7BPQ9NSQ0 103 aa27.55■■■□□ 2
TUBA4A-202ENST00000392088 ARHGEF11O15085 1522 aa27.54■■■□□ 2
TUBA4A-202ENST00000392088 DENND4BO75064 1496 aaPredicted RBP27.53■■■□□ 2
TUBA4A-202ENST00000392088 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
TUBA4A-202ENST00000392088 CHIC2Q9UKJ5 165 aa27.52■■■□□ 2
TUBA4A-202ENST00000392088 KDM6BO15054 1643 aa27.49■■□□□ 1.99
TUBA4A-202ENST00000392088 RBM19Q9Y4C8 960 aaKnown RBP27.48■■□□□ 1.99
TUBA4A-202ENST00000392088 GCC2Q8IWJ2 1684 aa27.48■■□□□ 1.99
TUBA4A-202ENST00000392088 HSPA5P11021 654 aaKnown RBP27.47■■□□□ 1.99
TUBA4A-202ENST00000392088 WASHC2AQ641Q2 1341 aa27.47■■□□□ 1.99
TUBA4A-202ENST00000392088 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
TUBA4A-202ENST00000392088 TCOF1Q13428 1488 aaKnown RBP27.46■■□□□ 1.99
TUBA4A-202ENST00000392088 HECW1Q76N89 1606 aa27.45■■□□□ 1.99
TUBA4A-202ENST00000392088 HNRNPUQ00839 825 aaKnown RBP eCLIP27.44■■□□□ 1.98
TUBA4A-202ENST00000392088 TARBP1Q13395 1621 aaKnown RBP27.36■■□□□ 1.97
TUBA4A-202ENST00000392088 EPRSP07814 1512 aaKnown RBP27.35■■□□□ 1.97
TUBA4A-202ENST00000392088 CDK13Q14004 1512 aaKnown RBP27.34■■□□□ 1.97
TUBA4A-202ENST00000392088 IRX6P78412 446 aaPredicted RBP27.34■■□□□ 1.97
TUBA4A-202ENST00000392088 MPHOSPH9Q99550 1183 aa27.34■■□□□ 1.97
TUBA4A-202ENST00000392088 AKNAQ7Z591 1439 aa27.34■■□□□ 1.97
TUBA4A-202ENST00000392088 FOXD1Q16676 465 aa27.33■■□□□ 1.97
TUBA4A-202ENST00000392088 EIF4G2P78344 907 aaKnown RBP eCLIP27.33■■□□□ 1.97
TUBA4A-202ENST00000392088 CCDC184Q52MB2 194 aa27.33■■□□□ 1.97
TUBA4A-202ENST00000392088 PDS5BQ9NTI5 1447 aa27.32■■□□□ 1.96
TUBA4A-202ENST00000392088 DNAJC5BQ9UF47 199 aa27.32■■□□□ 1.96
TUBA4A-202ENST00000392088 L3MBTL2Q969R5 705 aa27.31■■□□□ 1.96
TUBA4A-202ENST00000392088 ARID3CA6NKF2 412 aa27.31■■□□□ 1.96
TUBA4A-202ENST00000392088 C11orf95C9JLR9 678 aaPredicted RBP27.3■■□□□ 1.96
TUBA4A-202ENST00000392088 PBRM1Q86U86 1689 aa27.29■■□□□ 1.96
TUBA4A-202ENST00000392088 CNTLNQ9NXG0 1405 aa27.29■■□□□ 1.96
TUBA4A-202ENST00000392088 IQGAP2Q13576 1575 aa27.28■■□□□ 1.96
TUBA4A-202ENST00000392088 MIA2Q96PC5 1412 aa27.27■■□□□ 1.96
TUBA4A-202ENST00000392088 WDR62O43379 1518 aa27.25■■□□□ 1.95
TUBA4A-202ENST00000392088 NCOA1Q15788 1441 aa27.22■■□□□ 1.95
TUBA4A-202ENST00000392088 CCDC7Q96M83 1385 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms