RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 EEA1Q15075 1411 aa8.56□□□□□ -1.04
TRAV16-201ENST00000390444 PROM2Q8N271 834 aa8.56□□□□□ -1.04
TRAV16-201ENST00000390444 WDR97A6NE52 1622 aa8.54□□□□□ -1.04
TRAV16-201ENST00000390444 ABCB7O75027 752 aa8.54□□□□□ -1.04
TRAV16-201ENST00000390444 FBXO3Q9UK99 471 aa8.54□□□□□ -1.04
TRAV16-201ENST00000390444 TOPBP1Q92547 1522 aa8.54□□□□□ -1.04
TRAV16-201ENST00000390444 URB2Q14146 1524 aaKnown RBP8.52□□□□□ -1.05
TRAV16-201ENST00000390444 FGD5Q6ZNL6 1462 aa8.51□□□□□ -1.05
TRAV16-201ENST00000390444 KIF21BO75037 1637 aa8.51□□□□□ -1.05
TRAV16-201ENST00000390444 WDR62O43379 1518 aa8.5□□□□□ -1.05
TRAV16-201ENST00000390444 THOC2Q8NI27 1593 aaKnown RBP8.5□□□□□ -1.05
TRAV16-201ENST00000390444 MRC2Q9UBG0 1479 aa8.5□□□□□ -1.05
TRAV16-201ENST00000390444 SOGA1O94964 1423 aa8.49□□□□□ -1.05
TRAV16-201ENST00000390444 POLA1P09884 1462 aaPredicted RBP8.48□□□□□ -1.05
TRAV16-201ENST00000390444 DSG3P32926 999 aa8.47□□□□□ -1.05
TRAV16-201ENST00000390444 RUSC2Q8N2Y8 1516 aa8.47□□□□□ -1.05
TRAV16-201ENST00000390444 ABCA10Q8WWZ4 1543 aa8.46□□□□□ -1.05
TRAV16-201ENST00000390444 TARBP1Q13395 1621 aaKnown RBP8.46□□□□□ -1.06
TRAV16-201ENST00000390444 ABCA5Q8WWZ7 1642 aa8.45□□□□□ -1.06
TRAV16-201ENST00000390444 KIF27Q86VH2 1401 aa8.45□□□□□ -1.06
TRAV16-201ENST00000390444 ERICH3Q5RHP9 1530 aa8.44□□□□□ -1.06
TRAV16-201ENST00000390444 ERCC6Q03468 1493 aa8.43□□□□□ -1.06
TRAV16-201ENST00000390444 CUL7Q14999 1698 aa8.43□□□□□ -1.06
TRAV16-201ENST00000390444 PBRM1Q86U86 1689 aa8.43□□□□□ -1.06
TRAV16-201ENST00000390444 VASPP50552 380 aaPredicted RBP8.42□□□□□ -1.06
TRAV16-201ENST00000390444 CUX2O14529 1486 aa8.42□□□□□ -1.06
TRAV16-201ENST00000390444 GOLGA3Q08378 1498 aa8.42□□□□□ -1.06
TRAV16-201ENST00000390444 PRXQ9BXM0 1461 aa8.4□□□□□ -1.06
TRAV16-201ENST00000390444 RAD54L2Q9Y4B4 1467 aa8.4□□□□□ -1.06
TRAV16-201ENST00000390444 FAM9AQ8IZU1 332 aaPredicted RBP8.4□□□□□ -1.06
TRAV16-201ENST00000390444 OSCARQ8IYS5 282 aa8.38□□□□□ -1.07
TRAV16-201ENST00000390444 IFT140Q96RY7 1462 aa8.38□□□□□ -1.07
TRAV16-201ENST00000390444 SLC24A1O60721 1099 aa8.37□□□□□ -1.07
TRAV16-201ENST00000390444 LOC105371045A0A1W2PR82 267 aa8.36□□□□□ -1.07
TRAV16-201ENST00000390444 SPDYE2BA6NHP3 402 aa8.36□□□□□ -1.07
TRAV16-201ENST00000390444 SPDYE6P0CI01 402 aa8.36□□□□□ -1.07
TRAV16-201ENST00000390444 SPDYE2Q495Y8 402 aa8.36□□□□□ -1.07
TRAV16-201ENST00000390444 CTTNBP2Q8WZ74 1663 aa8.36□□□□□ -1.07
TRAV16-201ENST00000390444 EIF4G3O43432 1585 aaKnown RBP8.35□□□□□ -1.07
TRAV16-201ENST00000390444 GAPVD1Q14C86 1478 aa8.35□□□□□ -1.07
TRAV16-201ENST00000390444 RAPGEF2Q9Y4G8 1499 aa8.35□□□□□ -1.07
TRAV16-201ENST00000390444 TNIKQ9UKE5 1360 aa8.35□□□□□ -1.07
TRAV16-201ENST00000390444 SSUH2Q9Y2M2 353 aa8.34□□□□□ -1.07
TRAV16-201ENST00000390444 ADAMTS12P58397 1594 aa8.34□□□□□ -1.07
TRAV16-201ENST00000390444 ZNF692Q9BU19 519 aaPredicted RBP8.33□□□□□ -1.08
TRAV16-201ENST00000390444 IGF1RP08069 1367 aa8.33□□□□□ -1.08
TRAV16-201ENST00000390444 CACNB1Q02641 598 aaPredicted RBP8.31□□□□□ -1.08
TRAV16-201ENST00000390444 CEP162Q5TB80 1403 aa8.3□□□□□ -1.08
TRAV16-201ENST00000390444 CARMIL1Q5VZK9 1371 aa8.3□□□□□ -1.08
TRAV16-201ENST00000390444 GRIN2BQ13224 1484 aa8.29□□□□□ -1.08
TRAV16-201ENST00000390444 ZNF608Q9ULD9 1512 aaPredicted RBP8.29□□□□□ -1.08
TRAV16-201ENST00000390444 TDRD9Q8NDG6 1382 aaKnown RBP8.28□□□□□ -1.08
TRAV16-201ENST00000390444 IFNLR1Q8IU57 520 aaPredicted RBP8.28□□□□□ -1.08
TRAV16-201ENST00000390444 AQRO60306 1485 aaKnown RBP eCLIP8.26□□□□□ -1.09
TRAV16-201ENST00000390444 MAGI1Q96QZ7 1491 aaPredicted RBP8.26□□□□□ -1.09
TRAV16-201ENST00000390444 FHAD1B1AJZ9 1412 aa8.26□□□□□ -1.09
TRAV16-201ENST00000390444 UBTFP17480 764 aaKnown RBP8.25□□□□□ -1.09
TRAV16-201ENST00000390444 STAG3Q9UJ98 1225 aa8.25□□□□□ -1.09
TRAV16-201ENST00000390444 CLIP1P30622 1438 aa8.24□□□□□ -1.09
TRAV16-201ENST00000390444 SNAPC4Q5SXM2 1469 aa8.24□□□□□ -1.09
TRAV16-201ENST00000390444 EFCAB5A4FU69 1503 aa8.24□□□□□ -1.09
TRAV16-201ENST00000390444 SAMD9Q5K651 1589 aa8.22□□□□□ -1.09
TRAV16-201ENST00000390444 SYNJ2O15056 1496 aa8.21□□□□□ -1.09
TRAV16-201ENST00000390444 GRIN2AQ12879 1464 aa8.21□□□□□ -1.09
TRAV16-201ENST00000390444 CHD1O14646 1710 aa8.21□□□□□ -1.09
TRAV16-201ENST00000390444 IQGAP2Q13576 1575 aa8.21□□□□□ -1.1
TRAV16-201ENST00000390444 ARAP1Q96P48 1450 aa8.2□□□□□ -1.1
TRAV16-201ENST00000390444 ARHGAP35Q9NRY4 1499 aa8.19□□□□□ -1.1
TRAV16-201ENST00000390444 VPS8Q8N3P4 1428 aa8.19□□□□□ -1.1
TRAV16-201ENST00000390444 CEP170Q5SW79 1584 aa8.18□□□□□ -1.1
TRAV16-201ENST00000390444 UGGT2Q9NYU1 1516 aa8.17□□□□□ -1.1
TRAV16-201ENST00000390444 NUP160Q12769 1436 aa8.16□□□□□ -1.1
TRAV16-201ENST00000390444 PLCD3Q8N3E9 789 aa8.16□□□□□ -1.1
TRAV16-201ENST00000390444 SPOCK2Q92563 424 aa8.16□□□□□ -1.1
TRAV16-201ENST00000390444 CFAP43Q8NDM7 1665 aa8.15□□□□□ -1.1
TRAV16-201ENST00000390444 KIAA0586Q9BVV6 1533 aa8.15□□□□□ -1.1
TRAV16-201ENST00000390444 KLHL34Q8N239 644 aa8.15□□□□□ -1.1
TRAV16-201ENST00000390444 PKD2Q13563 968 aa8.14□□□□□ -1.11
TRAV16-201ENST00000390444 KIAA0556O60303 1618 aa8.14□□□□□ -1.11
TRAV16-201ENST00000390444 PCF11O94913 1555 aaKnown RBP8.14□□□□□ -1.11
TRAV16-201ENST00000390444 SHROOM2Q13796 1616 aa8.13□□□□□ -1.11
TRAV16-201ENST00000390444 MAP3K1Q13233 1512 aa8.12□□□□□ -1.11
TRAV16-201ENST00000390444 LRRIQ1Q96JM4 1722 aa8.12□□□□□ -1.11
TRAV16-201ENST00000390444 FYCO1Q9BQS8 1478 aa8.11□□□□□ -1.11
TRAV16-201ENST00000390444 RBM42Q9BTD8 480 aaKnown RBP8.1□□□□□ -1.11
TRAV16-201ENST00000390444 FMN1Q68DA7 1419 aa8.1□□□□□ -1.11
TRAV16-201ENST00000390444 TIAM1Q13009 1591 aa8.1□□□□□ -1.11
TRAV16-201ENST00000390444 PLEKHG5O94827 1062 aa8.09□□□□□ -1.11
TRAV16-201ENST00000390444 MIER1Q8N108 512 aa8.09□□□□□ -1.11
TRAV16-201ENST00000390444 ZBTB47Q9UFB7 747 aaPredicted RBP8.09□□□□□ -1.11
TRAV16-201ENST00000390444 FHOD3Q2V2M9 1422 aa8.09□□□□□ -1.11
TRAV16-201ENST00000390444 CLASP1Q7Z460 1538 aa8.08□□□□□ -1.12
TRAV16-201ENST00000390444 DISP1Q96F81 1524 aa8.08□□□□□ -1.12
TRAV16-201ENST00000390444 HECW1Q76N89 1606 aa8.08□□□□□ -1.12
TRAV16-201ENST00000390444 CHMP7Q8WUX9 453 aaPredicted RBP8.08□□□□□ -1.12
TRAV16-201ENST00000390444 CASKIN1Q8WXD9 1431 aa8.08□□□□□ -1.12
TRAV16-201ENST00000390444 RAPGEF6Q8TEU7 1601 aa8.05□□□□□ -1.12
TRAV16-201ENST00000390444 RANGAP1P46060 587 aaPredicted RBP8.05□□□□□ -1.12
TRAV16-201ENST00000390444 AKT1S1Q96B36 256 aa8.05□□□□□ -1.12
TRAV16-201ENST00000390444 ECM2O94769 699 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms