RNA–Protein interactions for RNA: ENST00000389975.7

VIT-203, Transcript of vitrin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VIT, Length 2,770 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-203ENST00000389975 UBTFP17480 764 aaKnown RBP12.25□□□□□ -0.45
VIT-203ENST00000389975 IFT140Q96RY7 1462 aa12.22□□□□□ -0.45
VIT-203ENST00000389975 PDE4CQ08493 712 aa12.22□□□□□ -0.45
VIT-203ENST00000389975 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
VIT-203ENST00000389975 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.45
VIT-203ENST00000389975 CHMP4AQ9BY43 222 aa12.2□□□□□ -0.46
VIT-203ENST00000389975 PKNOX2Q96KN3 472 aa12.18□□□□□ -0.46
VIT-203ENST00000389975 DHX37Q8IY37 1157 aaKnown RBP12.18□□□□□ -0.46
VIT-203ENST00000389975 TOPBP1Q92547 1522 aa12.15□□□□□ -0.46
VIT-203ENST00000389975 TNIKQ9UKE5 1360 aa12.15□□□□□ -0.46
VIT-203ENST00000389975 WRNQ14191 1432 aaPredicted RBP eCLIP12.14□□□□□ -0.47
VIT-203ENST00000389975 SYNJ1O43426 1573 aa12.11□□□□□ -0.47
VIT-203ENST00000389975 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
VIT-203ENST00000389975 PLCB2Q00722 1185 aa12.1□□□□□ -0.47
VIT-203ENST00000389975 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
VIT-203ENST00000389975 TMEM132AQ24JP5 1023 aa12.09□□□□□ -0.47
VIT-203ENST00000389975 DIEXFQ68CQ4 756 aaKnown RBP12.09□□□□□ -0.47
VIT-203ENST00000389975 ANO8Q9HCE9 1232 aaPredicted RBP12.08□□□□□ -0.48
VIT-203ENST00000389975 GOLGA3Q08378 1498 aa12.08□□□□□ -0.48
VIT-203ENST00000389975 NEUROD1Q13562 356 aa12.08□□□□□ -0.48
VIT-203ENST00000389975 SAMD1Q6SPF0 538 aaPredicted RBP12.07□□□□□ -0.48
VIT-203ENST00000389975 ACIN1Q9UKV3 1341 aaKnown RBP12.06□□□□□ -0.48
VIT-203ENST00000389975 EEA1Q15075 1411 aa12.05□□□□□ -0.48
VIT-203ENST00000389975 BCL11BQ9C0K0 894 aaPredicted RBP12.04□□□□□ -0.48
VIT-203ENST00000389975 EIF4G3O43432 1585 aaKnown RBP12.03□□□□□ -0.48
VIT-203ENST00000389975 NEFLP07196 543 aa12.02□□□□□ -0.49
VIT-203ENST00000389975 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
VIT-203ENST00000389975 RAPGEF2Q9Y4G8 1499 aa12.01□□□□□ -0.49
VIT-203ENST00000389975 CLIP1P30622 1438 aa12□□□□□ -0.49
VIT-203ENST00000389975 POLA1P09884 1462 aaPredicted RBP12□□□□□ -0.49
VIT-203ENST00000389975 OSCARQ8IYS5 282 aa12□□□□□ -0.49
VIT-203ENST00000389975 BIVM-ERCC5R4GMW8 1640 aa11.98□□□□□ -0.49
VIT-203ENST00000389975 MAGI1Q96QZ7 1491 aaPredicted RBP11.98□□□□□ -0.49
VIT-203ENST00000389975 YTHDC1Q96MU7 727 aaKnown RBP11.97□□□□□ -0.49
VIT-203ENST00000389975 ANP32EQ9BTT0 268 aa11.96□□□□□ -0.49
VIT-203ENST00000389975 KIF21BO75037 1637 aa11.95□□□□□ -0.5
VIT-203ENST00000389975 CUX1P39880 1505 aa11.95□□□□□ -0.5
VIT-203ENST00000389975 ABCA10Q8WWZ4 1543 aa11.94□□□□□ -0.5
VIT-203ENST00000389975 TAF7LQ5H9L4 462 aa11.94□□□□□ -0.5
VIT-203ENST00000389975 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
VIT-203ENST00000389975 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
VIT-203ENST00000389975 ZNF608Q9ULD9 1512 aaPredicted RBP11.93□□□□□ -0.5
VIT-203ENST00000389975 FGD5Q6ZNL6 1462 aa11.92□□□□□ -0.5
VIT-203ENST00000389975 GRIN2BQ13224 1484 aa11.92□□□□□ -0.5
VIT-203ENST00000389975 PPP6R1Q9UPN7 881 aa11.92□□□□□ -0.5
VIT-203ENST00000389975 VPS8Q8N3P4 1428 aa11.92□□□□□ -0.5
VIT-203ENST00000389975 ABCA5Q8WWZ7 1642 aa11.91□□□□□ -0.5
VIT-203ENST00000389975 CHD1O14646 1710 aa11.91□□□□□ -0.5
VIT-203ENST00000389975 PBRM1Q86U86 1689 aa11.9□□□□□ -0.5
VIT-203ENST00000389975 BRD2P25440 801 aaKnown RBP11.89□□□□□ -0.51
VIT-203ENST00000389975 CLASP1Q7Z460 1538 aa11.88□□□□□ -0.51
VIT-203ENST00000389975 MIER1Q8N108 512 aa11.87□□□□□ -0.51
VIT-203ENST00000389975 SYNJ2O15056 1496 aa11.87□□□□□ -0.51
VIT-203ENST00000389975 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
VIT-203ENST00000389975 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
VIT-203ENST00000389975 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
VIT-203ENST00000389975 CCDC136Q96JN2 1154 aa11.86□□□□□ -0.51
VIT-203ENST00000389975 PHF23Q9BUL5 403 aaPredicted RBP11.86□□□□□ -0.51
VIT-203ENST00000389975 ERICH3Q5RHP9 1530 aa11.86□□□□□ -0.51
VIT-203ENST00000389975 FGD1P98174 961 aa11.85□□□□□ -0.51
VIT-203ENST00000389975 KANK4Q5T7N3 995 aaPredicted RBP11.85□□□□□ -0.51
VIT-203ENST00000389975 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
VIT-203ENST00000389975 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
VIT-203ENST00000389975 CDK11BP21127 795 aaKnown RBP11.82□□□□□ -0.52
VIT-203ENST00000389975 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
VIT-203ENST00000389975 ARHGEF11O15085 1522 aa11.82□□□□□ -0.52
VIT-203ENST00000389975 AQRO60306 1485 aaKnown RBP eCLIP11.82□□□□□ -0.52
VIT-203ENST00000389975 IGSF3O75054 1194 aa11.82□□□□□ -0.52
VIT-203ENST00000389975 RAD54L2Q9Y4B4 1467 aa11.81□□□□□ -0.52
VIT-203ENST00000389975 ARAP1Q96P48 1450 aa11.8□□□□□ -0.52
VIT-203ENST00000389975 SNAPC4Q5SXM2 1469 aa11.8□□□□□ -0.52
VIT-203ENST00000389975 ITGAEP38570 1179 aa11.79□□□□□ -0.52
VIT-203ENST00000389975 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
VIT-203ENST00000389975 ADAMTS12P58397 1594 aa11.78□□□□□ -0.52
VIT-203ENST00000389975 PRXQ9BXM0 1461 aa11.77□□□□□ -0.52
VIT-203ENST00000389975 SHROOM2Q13796 1616 aa11.76□□□□□ -0.53
VIT-203ENST00000389975 FHAD1B1AJZ9 1412 aa11.76□□□□□ -0.53
VIT-203ENST00000389975 NUP160Q12769 1436 aa11.75□□□□□ -0.53
VIT-203ENST00000389975 A0A0U1RQG5 324 aaPredicted RBP11.74□□□□□ -0.53
VIT-203ENST00000389975 IRX6P78412 446 aaPredicted RBP11.74□□□□□ -0.53
VIT-203ENST00000389975 CUL7Q14999 1698 aa11.74□□□□□ -0.53
VIT-203ENST00000389975 TDRD9Q8NDG6 1382 aaKnown RBP11.73□□□□□ -0.53
VIT-203ENST00000389975 DHX57Q6P158 1386 aaKnown RBP11.73□□□□□ -0.53
VIT-203ENST00000389975 KDM2AQ9Y2K7 1162 aa11.73□□□□□ -0.53
VIT-203ENST00000389975 GRIN2AQ12879 1464 aa11.72□□□□□ -0.53
VIT-203ENST00000389975 KIF27Q86VH2 1401 aa11.71□□□□□ -0.54
VIT-203ENST00000389975 SLC4A1APQ9BWU0 796 aaKnown RBP11.71□□□□□ -0.54
VIT-203ENST00000389975 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
VIT-203ENST00000389975 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
VIT-203ENST00000389975 ARHGAP35Q9NRY4 1499 aa11.69□□□□□ -0.54
VIT-203ENST00000389975 FBLN2P98095 1184 aa11.67□□□□□ -0.54
VIT-203ENST00000389975 P3H3Q8IVL6 736 aa11.67□□□□□ -0.54
VIT-203ENST00000389975 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.65□□□□□ -0.54
VIT-203ENST00000389975 ATP1B4Q9UN42 357 aaPredicted RBP11.64□□□□□ -0.55
VIT-203ENST00000389975 CEP170Q5SW79 1584 aa11.63□□□□□ -0.55
VIT-203ENST00000389975 CCNB3Q8WWL7 1395 aa11.63□□□□□ -0.55
VIT-203ENST00000389975 POLR3GLQ9BT43 218 aa11.62□□□□□ -0.55
VIT-203ENST00000389975 RRBP1Q9P2E9 1410 aaKnown RBP11.62□□□□□ -0.55
VIT-203ENST00000389975 IGF1RP08069 1367 aa11.61□□□□□ -0.55
VIT-203ENST00000389975 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms