RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 BCANQ96GW7 911 aa12.57□□□□□ -0.4
TRIM6-203ENST00000380107 IGF1RP08069 1367 aa12.57□□□□□ -0.4
TRIM6-203ENST00000380107 MAPKBP1O60336 1514 aa12.56□□□□□ -0.4
TRIM6-203ENST00000380107 HMGXB3Q12766 1538 aa12.56□□□□□ -0.4
TRIM6-203ENST00000380107 PHLDB1Q86UU1 1377 aa12.55□□□□□ -0.4
TRIM6-203ENST00000380107 CARMIL1Q5VZK9 1371 aa12.53□□□□□ -0.4
TRIM6-203ENST00000380107 TIAM1Q13009 1591 aa12.52□□□□□ -0.4
TRIM6-203ENST00000380107 WDR97A6NE52 1622 aa12.52□□□□□ -0.41
TRIM6-203ENST00000380107 MYT1Q01538 1121 aa12.51□□□□□ -0.41
TRIM6-203ENST00000380107 SETD5Q9C0A6 1442 aa12.51□□□□□ -0.41
TRIM6-203ENST00000380107 PHF23Q9BUL5 403 aaPredicted RBP12.5□□□□□ -0.41
TRIM6-203ENST00000380107 LRRC9Q6ZRR7 1453 aa12.49□□□□□ -0.41
TRIM6-203ENST00000380107 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
TRIM6-203ENST00000380107 FGD5Q6ZNL6 1462 aa12.49□□□□□ -0.41
TRIM6-203ENST00000380107 FHOD3Q2V2M9 1422 aa12.46□□□□□ -0.41
TRIM6-203ENST00000380107 FKBP8Q14318 412 aa12.45□□□□□ -0.42
TRIM6-203ENST00000380107 TRIM52Q96A61 297 aa12.45□□□□□ -0.42
TRIM6-203ENST00000380107 PCF11O94913 1555 aaKnown RBP12.45□□□□□ -0.42
TRIM6-203ENST00000380107 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
TRIM6-203ENST00000380107 RAD54L2Q9Y4B4 1467 aa12.42□□□□□ -0.42
TRIM6-203ENST00000380107 PPP1R15AO75807 674 aaPredicted RBP12.41□□□□□ -0.42
TRIM6-203ENST00000380107 PRDM2Q13029 1718 aa12.41□□□□□ -0.42
TRIM6-203ENST00000380107 FHAD1B1AJZ9 1412 aa12.39□□□□□ -0.43
TRIM6-203ENST00000380107 MAP3K1Q13233 1512 aa12.39□□□□□ -0.43
TRIM6-203ENST00000380107 CFAP43Q8NDM7 1665 aa12.37□□□□□ -0.43
TRIM6-203ENST00000380107 ANP32CO43423 234 aa12.35□□□□□ -0.43
TRIM6-203ENST00000380107 FANCD2Q9BXW9 1451 aa12.35□□□□□ -0.43
TRIM6-203ENST00000380107 TONSLQ96HA7 1378 aa12.33□□□□□ -0.44
TRIM6-203ENST00000380107 PTPRKQ15262 1439 aa12.33□□□□□ -0.44
TRIM6-203ENST00000380107 NESP48681 1621 aa12.32□□□□□ -0.44
TRIM6-203ENST00000380107 POLA1P09884 1462 aaPredicted RBP12.3□□□□□ -0.44
TRIM6-203ENST00000380107 MTUS2Q5JR59 1369 aa12.3□□□□□ -0.44
TRIM6-203ENST00000380107 FGD6Q6ZV73 1430 aa12.3□□□□□ -0.44
TRIM6-203ENST00000380107 CASKIN1Q8WXD9 1431 aa12.3□□□□□ -0.44
TRIM6-203ENST00000380107 FYCO1Q9BQS8 1478 aa12.3□□□□□ -0.44
TRIM6-203ENST00000380107 NEFLP07196 543 aa12.29□□□□□ -0.44
TRIM6-203ENST00000380107 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
TRIM6-203ENST00000380107 CCDC18Q5T9S5 1454 aa12.29□□□□□ -0.44
TRIM6-203ENST00000380107 IRX6P78412 446 aaPredicted RBP12.29□□□□□ -0.44
TRIM6-203ENST00000380107 ARID3CA6NKF2 412 aa12.28□□□□□ -0.44
TRIM6-203ENST00000380107 RRP7BPQ9NSQ0 103 aa12.28□□□□□ -0.44
TRIM6-203ENST00000380107 ANP32EQ9BTT0 268 aa12.27□□□□□ -0.44
TRIM6-203ENST00000380107 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.44
TRIM6-203ENST00000380107 TOPBP1Q92547 1522 aa12.27□□□□□ -0.45
TRIM6-203ENST00000380107 TIMELESSQ9UNS1 1208 aa12.27□□□□□ -0.45
TRIM6-203ENST00000380107 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.459e-8■■□□□ 11.9
TRIM6-203ENST00000380107 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
TRIM6-203ENST00000380107 ABCA10Q8WWZ4 1543 aa12.25□□□□□ -0.45
TRIM6-203ENST00000380107 LRRIQ1Q96JM4 1722 aa12.24□□□□□ -0.45
TRIM6-203ENST00000380107 CTTNBP2Q8WZ74 1663 aa12.24□□□□□ -0.45
TRIM6-203ENST00000380107 DNMBPQ6XZF7 1577 aa12.24□□□□□ -0.45
TRIM6-203ENST00000380107 HNRNPUQ00839 825 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRIM6-203ENST00000380107 RBM19Q9Y4C8 960 aaKnown RBP12.24□□□□□ -0.45
TRIM6-203ENST00000380107 SNAPC4Q5SXM2 1469 aa12.24□□□□□ -0.45
TRIM6-203ENST00000380107 EFCAB5A4FU69 1503 aa12.23□□□□□ -0.45
TRIM6-203ENST00000380107 PTPN23Q9H3S7 1636 aa12.23□□□□□ -0.45
TRIM6-203ENST00000380107 FOXD1Q16676 465 aa12.23□□□□□ -0.45
TRIM6-203ENST00000380107 NAIPQ13075 1403 aa12.22□□□□□ -0.45
TRIM6-203ENST00000380107 FMN1Q68DA7 1419 aa12.22□□□□□ -0.45
TRIM6-203ENST00000380107 HFM1A2PYH4 1435 aa12.22□□□□□ -0.45
TRIM6-203ENST00000380107 UACAQ9BZF9 1416 aa12.22□□□□□ -0.45
TRIM6-203ENST00000380107 NCOA2Q15596 1464 aa12.22□□□□□ -0.45
TRIM6-203ENST00000380107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.46
TRIM6-203ENST00000380107 HSPA5P11021 654 aaKnown RBP12.2□□□□□ -0.46
TRIM6-203ENST00000380107 CCDC184Q52MB2 194 aa12.2□□□□□ -0.46
TRIM6-203ENST00000380107 WASHC2AQ641Q2 1341 aa12.19□□□□□ -0.46
TRIM6-203ENST00000380107 CUL7Q14999 1698 aa12.19□□□□□ -0.46
TRIM6-203ENST00000380107 MYOM3Q5VTT5 1437 aa12.18□□□□□ -0.46
TRIM6-203ENST00000380107 URB2Q14146 1524 aaKnown RBP12.17□□□□□ -0.46
TRIM6-203ENST00000380107 CNGB1Q14028 1251 aaPredicted RBP12.17□□□□□ -0.46
TRIM6-203ENST00000380107 KDM5BQ9UGL1 1544 aa12.17□□□□□ -0.46
TRIM6-203ENST00000380107 MAGI3Q5TCQ9 1506 aa12.16□□□□□ -0.46
TRIM6-203ENST00000380107 KDM6BO15054 1643 aa12.15□□□□□ -0.46
TRIM6-203ENST00000380107 GRIN2BQ13224 1484 aa12.15□□□□□ -0.46
TRIM6-203ENST00000380107 C11orf95C9JLR9 678 aaPredicted RBP12.15□□□□□ -0.47
TRIM6-203ENST00000380107 DENND4BO75064 1496 aaPredicted RBP12.13□□□□□ -0.47
TRIM6-203ENST00000380107 GAPVD1Q14C86 1478 aa12.13□□□□□ -0.47
TRIM6-203ENST00000380107 SUPT6HQ7KZ85 1726 aaKnown RBP12.13□□□□□ -0.47
TRIM6-203ENST00000380107 FAM9BQ8IZU0 186 aa12.13□□□□□ -0.47
TRIM6-203ENST00000380107 SAMD9Q5K651 1589 aa12.13□□□□□ -0.47
TRIM6-203ENST00000380107 L3MBTL2Q969R5 705 aa12.13□□□□□ -0.47
TRIM6-203ENST00000380107 SENP3-EIF4A1A0A087X0R7 540 aa12.12□□□□□ -0.47
TRIM6-203ENST00000380107 MSH5O43196 834 aa12.12□□□□□ -0.47
TRIM6-203ENST00000380107 EIF4G2P78344 907 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRIM6-203ENST00000380107 MPHOSPH9Q99550 1183 aa12.11□□□□□ -0.47
TRIM6-203ENST00000380107 UGGT2Q9NYU1 1516 aa12.1□□□□□ -0.47
TRIM6-203ENST00000380107 CDK13Q14004 1512 aaKnown RBP12.09□□□□□ -0.47
TRIM6-203ENST00000380107 EHBP1L1Q8N3D4 1523 aa12.09□□□□□ -0.47
TRIM6-203ENST00000380107 ABCA5Q8WWZ7 1642 aa12.09□□□□□ -0.47
TRIM6-203ENST00000380107 LAMC3Q9Y6N6 1575 aa12.08□□□□□ -0.48
TRIM6-203ENST00000380107 NBPF8Q3BBV2 869 aa12.08□□□□□ -0.48
TRIM6-203ENST00000380107 ZNF644Q9H582 1327 aaPredicted RBP12.07□□□□□ -0.48
TRIM6-203ENST00000380107 MRS2Q9HD23 443 aa12.06□□□□□ -0.48
TRIM6-203ENST00000380107 POLR3GLQ9BT43 218 aa12.06□□□□□ -0.48
TRIM6-203ENST00000380107 B4GALNT3Q6L9W6 998 aa12.05□□□□□ -0.48
TRIM6-203ENST00000380107 PRKRIP1Q9H875 184 aaPredicted RBP12.05□□□□□ -0.48
TRIM6-203ENST00000380107 CDK11AQ9UQ88 783 aaPredicted RBP12.05□□□□□ -0.48
TRIM6-203ENST00000380107 ARHGEF11O15085 1522 aa12.04□□□□□ -0.48
TRIM6-203ENST00000380107 CNTLNQ9NXG0 1405 aa12.04□□□□□ -0.48
TRIM6-203ENST00000380107 EPRSP07814 1512 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms