RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 PRDM2Q13029 1718 aa13.46□□□□□ -0.26
NHLRC3-202ENST00000379600 IGF1RP08069 1367 aa13.46□□□□□ -0.26
NHLRC3-202ENST00000379600 CFAP43Q8NDM7 1665 aa13.44□□□□□ -0.26
NHLRC3-202ENST00000379600 SIN3AQ96ST3 1273 aa13.43□□□□□ -0.26
NHLRC3-202ENST00000379600 PPP1R15AO75807 674 aaPredicted RBP13.42□□□□□ -0.26
NHLRC3-202ENST00000379600 DDX10Q13206 875 aaKnown RBP13.41□□□□□ -0.26
NHLRC3-202ENST00000379600 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
NHLRC3-202ENST00000379600 BCANQ96GW7 911 aa13.39□□□□□ -0.27
NHLRC3-202ENST00000379600 ANP32EQ9BTT0 268 aa13.39□□□□□ -0.27
NHLRC3-202ENST00000379600 FKBP8Q14318 412 aa13.36□□□□□ -0.27
NHLRC3-202ENST00000379600 CARMIL1Q5VZK9 1371 aa13.36□□□□□ -0.27
NHLRC3-202ENST00000379600 FGD5Q6ZNL6 1462 aa13.35□□□□□ -0.27
NHLRC3-202ENST00000379600 HIRIP3Q9BW71 556 aaPredicted RBP13.35□□□□□ -0.27
NHLRC3-202ENST00000379600 FAM50AQ14320 339 aaKnown RBP13.33□□□□□ -0.28
NHLRC3-202ENST00000379600 FHAD1B1AJZ9 1412 aa13.31□□□□□ -0.28
NHLRC3-202ENST00000379600 TIMELESSQ9UNS1 1208 aa13.3□□□□□ -0.28
NHLRC3-202ENST00000379600 FHOD3Q2V2M9 1422 aa13.29□□□□□ -0.28
NHLRC3-202ENST00000379600 CCER2I3L3R5 266 aa13.29□□□□□ -0.28
NHLRC3-202ENST00000379600 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
NHLRC3-202ENST00000379600 TRIM52Q96A61 297 aa13.28□□□□□ -0.28
NHLRC3-202ENST00000379600 FYCO1Q9BQS8 1478 aa13.28□□□□□ -0.28
NHLRC3-202ENST00000379600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.27□□□□□ -0.29
NHLRC3-202ENST00000379600 KDM5BQ9UGL1 1544 aa13.26□□□□□ -0.29
NHLRC3-202ENST00000379600 CADPSQ9ULU8 1353 aa13.26□□□□□ -0.29
NHLRC3-202ENST00000379600 RBM19Q9Y4C8 960 aaKnown RBP13.25□□□□□ -0.29
NHLRC3-202ENST00000379600 PTPRKQ15262 1439 aa13.25□□□□□ -0.29
NHLRC3-202ENST00000379600 CASKIN1Q8WXD9 1431 aa13.25□□□□□ -0.29
NHLRC3-202ENST00000379600 LRRIQ1Q96JM4 1722 aa13.25□□□□□ -0.29
NHLRC3-202ENST00000379600 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.29
NHLRC3-202ENST00000379600 EFCAB5A4FU69 1503 aa13.23□□□□□ -0.29
NHLRC3-202ENST00000379600 FGD6Q6ZV73 1430 aa13.23□□□□□ -0.29
NHLRC3-202ENST00000379600 CCDC18Q5T9S5 1454 aa13.22□□□□□ -0.29
NHLRC3-202ENST00000379600 PTPN23Q9H3S7 1636 aa13.22□□□□□ -0.29
NHLRC3-202ENST00000379600 CTTNBP2Q8WZ74 1663 aa13.22□□□□□ -0.29
NHLRC3-202ENST00000379600 ANP32CO43423 234 aa13.22□□□□□ -0.29
NHLRC3-202ENST00000379600 SNAPC4Q5SXM2 1469 aa13.22□□□□□ -0.29
NHLRC3-202ENST00000379600 ATP1B4Q9UN42 357 aaPredicted RBP13.2□□□□□ -0.3
NHLRC3-202ENST00000379600 RAD54L2Q9Y4B4 1467 aa13.2□□□□□ -0.3
NHLRC3-202ENST00000379600 HFM1A2PYH4 1435 aa13.2□□□□□ -0.3
NHLRC3-202ENST00000379600 UACAQ9BZF9 1416 aa13.19□□□□□ -0.3
NHLRC3-202ENST00000379600 ABCA10Q8WWZ4 1543 aa13.18□□□□□ -0.3
NHLRC3-202ENST00000379600 NEFLP07196 543 aa13.18□□□□□ -0.3
NHLRC3-202ENST00000379600 TONSLQ96HA7 1378 aa13.17□□□□□ -0.3
NHLRC3-202ENST00000379600 MSH5O43196 834 aa13.17□□□□□ -0.3
NHLRC3-202ENST00000379600 CC2D2AQ9P2K1 1620 aa13.17□□□□□ -0.3
NHLRC3-202ENST00000379600 NAIPQ13075 1403 aa13.16□□□□□ -0.3
NHLRC3-202ENST00000379600 CUL7Q14999 1698 aa13.16□□□□□ -0.3
NHLRC3-202ENST00000379600 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
NHLRC3-202ENST00000379600 DNMBPQ6XZF7 1577 aa13.16□□□□□ -0.3
NHLRC3-202ENST00000379600 POLA1P09884 1462 aaPredicted RBP13.15□□□□□ -0.3
NHLRC3-202ENST00000379600 DENND4BO75064 1496 aaPredicted RBP13.14□□□□□ -0.31
NHLRC3-202ENST00000379600 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
NHLRC3-202ENST00000379600 SAMD9Q5K651 1589 aa13.14□□□□□ -0.31
NHLRC3-202ENST00000379600 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
NHLRC3-202ENST00000379600 FMN1Q68DA7 1419 aa13.12□□□□□ -0.31
NHLRC3-202ENST00000379600 NCOA2Q15596 1464 aa13.12□□□□□ -0.31
NHLRC3-202ENST00000379600 GRIN2BQ13224 1484 aa13.11□□□□□ -0.31
NHLRC3-202ENST00000379600 WASHC2AQ641Q2 1341 aa13.1□□□□□ -0.31
NHLRC3-202ENST00000379600 MYOM3Q5VTT5 1437 aa13.1□□□□□ -0.31
NHLRC3-202ENST00000379600 KDM6BO15054 1643 aa13.09□□□□□ -0.31
NHLRC3-202ENST00000379600 MAGI3Q5TCQ9 1506 aa13.09□□□□□ -0.31
NHLRC3-202ENST00000379600 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
NHLRC3-202ENST00000379600 IRX6P78412 446 aaPredicted RBP13.09□□□□□ -0.31
NHLRC3-202ENST00000379600 ARHGEF11O15085 1522 aa13.09□□□□□ -0.31
NHLRC3-202ENST00000379600 SUPT6HQ7KZ85 1726 aaKnown RBP13.08□□□□□ -0.32
NHLRC3-202ENST00000379600 HNRNPUQ00839 825 aaKnown RBP eCLIP13.08□□□□□ -0.32
NHLRC3-202ENST00000379600 GCC2Q8IWJ2 1684 aa13.08□□□□□ -0.32
NHLRC3-202ENST00000379600 HECW1Q76N89 1606 aa13.07□□□□□ -0.32
NHLRC3-202ENST00000379600 UGGT2Q9NYU1 1516 aa13.07□□□□□ -0.32
NHLRC3-202ENST00000379600 CCDC184Q52MB2 194 aa13.07□□□□□ -0.32
NHLRC3-202ENST00000379600 HSPA5P11021 654 aaKnown RBP13.05□□□□□ -0.32
NHLRC3-202ENST00000379600 THOC2Q8NI27 1593 aaKnown RBP13.05□□□□□ -0.32
NHLRC3-202ENST00000379600 NESP48681 1621 aa13.05□□□□□ -0.32
NHLRC3-202ENST00000379600 EHBP1L1Q8N3D4 1523 aa13.05□□□□□ -0.32
NHLRC3-202ENST00000379600 ABCA5Q8WWZ7 1642 aa13.04□□□□□ -0.32
NHLRC3-202ENST00000379600 FANCIQ9NVI1 1328 aa13.04□□□□□ -0.32
NHLRC3-202ENST00000379600 TCOF1Q13428 1488 aaKnown RBP13.03□□□□□ -0.32
NHLRC3-202ENST00000379600 C11orf95C9JLR9 678 aaPredicted RBP13.02□□□□□ -0.32
NHLRC3-202ENST00000379600 CNTLNQ9NXG0 1405 aa13.01□□□□□ -0.33
NHLRC3-202ENST00000379600 URB2Q14146 1524 aaKnown RBP13.01□□□□□ -0.33
NHLRC3-202ENST00000379600 RRP7BPQ9NSQ0 103 aa13□□□□□ -0.33
NHLRC3-202ENST00000379600 KIF21AQ7Z4S6 1674 aa12.99□□□□□ -0.33
NHLRC3-202ENST00000379600 NCOA1Q15788 1441 aa12.98□□□□□ -0.33
NHLRC3-202ENST00000379600 LAMC3Q9Y6N6 1575 aa12.97□□□□□ -0.33
NHLRC3-202ENST00000379600 TDRD9Q8NDG6 1382 aaKnown RBP12.97□□□□□ -0.33
NHLRC3-202ENST00000379600 CHIC2Q9UKJ5 165 aa12.97□□□□□ -0.33
NHLRC3-202ENST00000379600 AKNAQ7Z591 1439 aa12.97□□□□□ -0.33
NHLRC3-202ENST00000379600 CDK11AQ9UQ88 783 aaPredicted RBP12.97□□□□□ -0.33
NHLRC3-202ENST00000379600 CCDC7Q96M83 1385 aa12.96□□□□□ -0.34
NHLRC3-202ENST00000379600 POLR1AO95602 1720 aaPredicted RBP12.96□□□□□ -0.34
NHLRC3-202ENST00000379600 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.34
NHLRC3-202ENST00000379600 L3MBTL2Q969R5 705 aa12.95□□□□□ -0.34
NHLRC3-202ENST00000379600 PRKRIP1Q9H875 184 aaPredicted RBP12.95□□□□□ -0.34
NHLRC3-202ENST00000379600 FOXD1Q16676 465 aa12.94□□□□□ -0.34
NHLRC3-202ENST00000379600 PPP4R2Q9NY27 417 aa12.94□□□□□ -0.34
NHLRC3-202ENST00000379600 GAPVD1Q14C86 1478 aa12.94□□□□□ -0.34
NHLRC3-202ENST00000379600 ERICH6BQ5W0A0 696 aa12.94□□□□□ -0.34
NHLRC3-202ENST00000379600 TEX14Q8IWB6 1497 aa12.93□□□□□ -0.34
NHLRC3-202ENST00000379600 MPHOSPH9Q99550 1183 aa12.93□□□□□ -0.34
NHLRC3-202ENST00000379600 NBPF8Q3BBV2 869 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms