RNA–Protein interactions for RNA: ENST00000374946.7

TMEM235-201, Transcript of transmembrane protein 235, humanhuman

TSL 5 BASIC

Gene TMEM235, Length 2,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-201ENST00000374946 ARHGAP35Q9NRY4 1499 aa27.33■■□□□ 1.97
TMEM235-201ENST00000374946 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
TMEM235-201ENST00000374946 IGF1RP08069 1367 aa27.32■■□□□ 1.96
TMEM235-201ENST00000374946 NESP48681 1621 aa27.31■■□□□ 1.96
TMEM235-201ENST00000374946 DDX10Q13206 875 aaKnown RBP27.3■■□□□ 1.96
TMEM235-201ENST00000374946 WDR97A6NE52 1622 aa27.29■■□□□ 1.96
TMEM235-201ENST00000374946 BCL11AQ9H165 835 aa27.25■■□□□ 1.95
TMEM235-201ENST00000374946 SETD5Q9C0A6 1442 aa27.21■■□□□ 1.95
TMEM235-201ENST00000374946 PPP1R15AO75807 674 aaPredicted RBP27.2■■□□□ 1.94
TMEM235-201ENST00000374946 RBM19Q9Y4C8 960 aaKnown RBP27.2■■□□□ 1.94
TMEM235-201ENST00000374946 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
TMEM235-201ENST00000374946 NEFLP07196 543 aa27.19■■□□□ 1.94
TMEM235-201ENST00000374946 SIN3AQ96ST3 1273 aa27.18■■□□□ 1.94
TMEM235-201ENST00000374946 TIAM1Q13009 1591 aa27.18■■□□□ 1.94
TMEM235-201ENST00000374946 CARMIL1Q5VZK9 1371 aa27.16■■□□□ 1.94
TMEM235-201ENST00000374946 RAD54L2Q9Y4B4 1467 aa27.15■■□□□ 1.94
TMEM235-201ENST00000374946 MAP3K1Q13233 1512 aa27.12■■□□□ 1.93
TMEM235-201ENST00000374946 DNMBPQ6XZF7 1577 aa27.12■■□□□ 1.93
TMEM235-201ENST00000374946 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
TMEM235-201ENST00000374946 CCER2I3L3R5 266 aa27.1■■□□□ 1.93
TMEM235-201ENST00000374946 TRIM52Q96A61 297 aa27.1■■□□□ 1.93
TMEM235-201ENST00000374946 POLA1P09884 1462 aaPredicted RBP27.09■■□□□ 1.93
TMEM235-201ENST00000374946 TIMELESSQ9UNS1 1208 aa27.06■■□□□ 1.92
TMEM235-201ENST00000374946 PHLDB1Q86UU1 1377 aa27.06■■□□□ 1.92
TMEM235-201ENST00000374946 LRRC9Q6ZRR7 1453 aa27.06■■□□□ 1.92
TMEM235-201ENST00000374946 HIRIP3Q9BW71 556 aaPredicted RBP27.05■■□□□ 1.92
TMEM235-201ENST00000374946 ANP32CO43423 234 aa27.04■■□□□ 1.92
TMEM235-201ENST00000374946 ABCA10Q8WWZ4 1543 aa27.01■■□□□ 1.91
TMEM235-201ENST00000374946 FAM50AQ14320 339 aaKnown RBP27.01■■□□□ 1.91
TMEM235-201ENST00000374946 URB2Q14146 1524 aaKnown RBP26.99■■□□□ 1.91
TMEM235-201ENST00000374946 LAMC3Q9Y6N6 1575 aa26.98■■□□□ 1.91
TMEM235-201ENST00000374946 CFAP43Q8NDM7 1665 aa26.95■■□□□ 1.9
TMEM235-201ENST00000374946 MSH5O43196 834 aa26.9■■□□□ 1.9
TMEM235-201ENST00000374946 P3H3Q8IVL6 736 aa26.9■■□□□ 1.9
TMEM235-201ENST00000374946 PCF11O94913 1555 aaKnown RBP26.86■■□□□ 1.89
TMEM235-201ENST00000374946 FHAD1B1AJZ9 1412 aa26.85■■□□□ 1.89
TMEM235-201ENST00000374946 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
TMEM235-201ENST00000374946 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
TMEM235-201ENST00000374946 KIF21AQ7Z4S6 1674 aa26.8■■□□□ 1.88
TMEM235-201ENST00000374946 TONSLQ96HA7 1378 aa26.78■■□□□ 1.88
TMEM235-201ENST00000374946 FANCIQ9NVI1 1328 aa26.77■■□□□ 1.88
TMEM235-201ENST00000374946 CUL7Q14999 1698 aa26.77■■□□□ 1.88
TMEM235-201ENST00000374946 FHOD3Q2V2M9 1422 aa26.76■■□□□ 1.87
TMEM235-201ENST00000374946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.75■■□□□ 1.87
TMEM235-201ENST00000374946 ATP1B4Q9UN42 357 aaPredicted RBP26.74■■□□□ 1.87
TMEM235-201ENST00000374946 HNRNPUQ00839 825 aaKnown RBP eCLIP26.72■■□□□ 1.87
TMEM235-201ENST00000374946 CDK11AQ9UQ88 783 aaPredicted RBP26.72■■□□□ 1.87
TMEM235-201ENST00000374946 ABCA5Q8WWZ7 1642 aa26.72■■□□□ 1.87
TMEM235-201ENST00000374946 GAPVD1Q14C86 1478 aa26.7■■□□□ 1.86
TMEM235-201ENST00000374946 IRX6P78412 446 aaPredicted RBP26.69■■□□□ 1.86
TMEM235-201ENST00000374946 CTTNBP2Q8WZ74 1663 aa26.68■■□□□ 1.86
TMEM235-201ENST00000374946 CCDC18Q5T9S5 1454 aa26.66■■□□□ 1.86
TMEM235-201ENST00000374946 FYCO1Q9BQS8 1478 aa26.65■■□□□ 1.86
TMEM235-201ENST00000374946 UACAQ9BZF9 1416 aa26.62■■□□□ 1.85
TMEM235-201ENST00000374946 EFCAB5A4FU69 1503 aa26.62■■□□□ 1.85
TMEM235-201ENST00000374946 ERICH6Q7L0X2 663 aa26.61■■□□□ 1.85
TMEM235-201ENST00000374946 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
TMEM235-201ENST00000374946 KDM5BQ9UGL1 1544 aa26.61■■□□□ 1.85
TMEM235-201ENST00000374946 FGD6Q6ZV73 1430 aa26.61■■□□□ 1.85
TMEM235-201ENST00000374946 CASKIN1Q8WXD9 1431 aa26.59■■□□□ 1.85
TMEM235-201ENST00000374946 PTPN23Q9H3S7 1636 aa26.59■■□□□ 1.85
TMEM235-201ENST00000374946 HFM1A2PYH4 1435 aa26.58■■□□□ 1.85
TMEM235-201ENST00000374946 PTPRKQ15262 1439 aa26.57■■□□□ 1.84
TMEM235-201ENST00000374946 ERICH6BQ5W0A0 696 aa26.56■■□□□ 1.84
TMEM235-201ENST00000374946 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.84
TMEM235-201ENST00000374946 PPP4R2Q9NY27 417 aa26.51■■□□□ 1.84
TMEM235-201ENST00000374946 WASHC2AQ641Q2 1341 aa26.51■■□□□ 1.83
TMEM235-201ENST00000374946 SNAPC4Q5SXM2 1469 aa26.48■■□□□ 1.83
TMEM235-201ENST00000374946 NAIPQ13075 1403 aa26.48■■□□□ 1.83
TMEM235-201ENST00000374946 SAMD9Q5K651 1589 aa26.47■■□□□ 1.83
TMEM235-201ENST00000374946 FMN1Q68DA7 1419 aa26.47■■□□□ 1.83
TMEM235-201ENST00000374946 HSPA5P11021 654 aaKnown RBP26.46■■□□□ 1.83
TMEM235-201ENST00000374946 MRC2Q9UBG0 1479 aa26.45■■□□□ 1.82
TMEM235-201ENST00000374946 CCDC184Q52MB2 194 aa26.43■■□□□ 1.82
TMEM235-201ENST00000374946 LRRIQ1Q96JM4 1722 aa26.43■■□□□ 1.82
TMEM235-201ENST00000374946 MTUS2Q5JR59 1369 aa26.43■■□□□ 1.82
TMEM235-201ENST00000374946 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
TMEM235-201ENST00000374946 NCOA2Q15596 1464 aa26.4■■□□□ 1.82
TMEM235-201ENST00000374946 MYT1LQ9UL68 1186 aa26.39■■□□□ 1.81
TMEM235-201ENST00000374946 CNTLNQ9NXG0 1405 aa26.38■■□□□ 1.81
TMEM235-201ENST00000374946 B4GALNT3Q6L9W6 998 aa26.36■■□□□ 1.81
TMEM235-201ENST00000374946 MYOM3Q5VTT5 1437 aa26.35■■□□□ 1.81
TMEM235-201ENST00000374946 ZNF608Q9ULD9 1512 aaPredicted RBP26.35■■□□□ 1.81
TMEM235-201ENST00000374946 EIF4G2P78344 907 aaKnown RBP eCLIP26.35■■□□□ 1.81
TMEM235-201ENST00000374946 ERCC6Q03468 1493 aa26.35■■□□□ 1.81
TMEM235-201ENST00000374946 GRIN2BQ13224 1484 aa26.33■■□□□ 1.81
TMEM235-201ENST00000374946 DENND4BO75064 1496 aaPredicted RBP26.32■■□□□ 1.8
TMEM235-201ENST00000374946 ADAMTS12P58397 1594 aa26.32■■□□□ 1.8
TMEM235-201ENST00000374946 FAM9BQ8IZU0 186 aa26.31■■□□□ 1.8
TMEM235-201ENST00000374946 PRKRIP1Q9H875 184 aaPredicted RBP26.31■■□□□ 1.8
TMEM235-201ENST00000374946 ZBED9Q6R2W3 1325 aa26.3■■□□□ 1.8
TMEM235-201ENST00000374946 HECW1Q76N89 1606 aa26.29■■□□□ 1.8
TMEM235-201ENST00000374946 DEKP35659 375 aaKnown RBP26.28■■□□□ 1.8
TMEM235-201ENST00000374946 SUPT6HQ7KZ85 1726 aaKnown RBP26.28■■□□□ 1.8
TMEM235-201ENST00000374946 MRS2Q9HD23 443 aa26.27■■□□□ 1.8
TMEM235-201ENST00000374946 WDR62O43379 1518 aa26.27■■□□□ 1.8
TMEM235-201ENST00000374946 C11orf95C9JLR9 678 aaPredicted RBP26.26■■□□□ 1.79
TMEM235-201ENST00000374946 GCC2Q8IWJ2 1684 aa26.26■■□□□ 1.79
TMEM235-201ENST00000374946 RRP7BPQ9NSQ0 103 aa26.25■■□□□ 1.79
TMEM235-201ENST00000374946 NCOA1Q15788 1441 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms