RNA–Protein interactions for RNA: ENST00000374930.7

NUP35-202, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 998 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-202ENST00000374930 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
NUP35-202ENST00000374930 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
NUP35-202ENST00000374930 BIVM-ERCC5R4GMW8 1640 aa12.29□□□□□ -0.44
NUP35-202ENST00000374930 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
NUP35-202ENST00000374930 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
NUP35-202ENST00000374930 SYNJ1O43426 1573 aa12.24□□□□□ -0.45
NUP35-202ENST00000374930 TNIKQ9UKE5 1360 aa12.24□□□□□ -0.45
NUP35-202ENST00000374930 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
NUP35-202ENST00000374930 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.45
NUP35-202ENST00000374930 PDS5BQ9NTI5 1447 aa12.21□□□□□ -0.45
NUP35-202ENST00000374930 VASPP50552 380 aaPredicted RBP12.2□□□□□ -0.46
NUP35-202ENST00000374930 GOLGA3Q08378 1498 aa12.2□□□□□ -0.46
NUP35-202ENST00000374930 SOGA1O94964 1423 aa12.2□□□□□ -0.46
NUP35-202ENST00000374930 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
NUP35-202ENST00000374930 KIF21BO75037 1637 aa12.19□□□□□ -0.46
NUP35-202ENST00000374930 CUX1P39880 1505 aa12.17□□□□□ -0.46
NUP35-202ENST00000374930 FANCD2Q9BXW9 1451 aa12.17□□□□□ -0.46
NUP35-202ENST00000374930 ERICH3Q5RHP9 1530 aa12.14□□□□□ -0.47
NUP35-202ENST00000374930 DNMBPQ6XZF7 1577 aa12.11□□□□□ -0.47
NUP35-202ENST00000374930 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
NUP35-202ENST00000374930 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
NUP35-202ENST00000374930 PRXQ9BXM0 1461 aa12.09□□□□□ -0.47
NUP35-202ENST00000374930 IFNLR1Q8IU57 520 aaPredicted RBP12.09□□□□□ -0.47
NUP35-202ENST00000374930 RUSC2Q8N2Y8 1516 aa12.06□□□□□ -0.48
NUP35-202ENST00000374930 CEP162Q5TB80 1403 aa12.06□□□□□ -0.48
NUP35-202ENST00000374930 ABCA10Q8WWZ4 1543 aa12.05□□□□□ -0.48
NUP35-202ENST00000374930 TOPBP1Q92547 1522 aa12.05□□□□□ -0.48
NUP35-202ENST00000374930 FGD5Q6ZNL6 1462 aa12.03□□□□□ -0.48
NUP35-202ENST00000374930 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
NUP35-202ENST00000374930 IGF1RP08069 1367 aa12.02□□□□□ -0.49
NUP35-202ENST00000374930 CUX2O14529 1486 aa12.01□□□□□ -0.49
NUP35-202ENST00000374930 NESP48681 1621 aa11.98□□□□□ -0.49
NUP35-202ENST00000374930 POLA1P09884 1462 aaPredicted RBP11.98□□□□□ -0.49
NUP35-202ENST00000374930 RAPGEF2Q9Y4G8 1499 aa11.97□□□□□ -0.49
NUP35-202ENST00000374930 CLIP1P30622 1438 aa11.97□□□□□ -0.49
NUP35-202ENST00000374930 CARMIL1Q5VZK9 1371 aa11.97□□□□□ -0.49
NUP35-202ENST00000374930 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
NUP35-202ENST00000374930 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
NUP35-202ENST00000374930 CUL7Q14999 1698 aa11.94□□□□□ -0.5
NUP35-202ENST00000374930 PCGF6Q9BYE7 350 aa11.94□□□□□ -0.5
NUP35-202ENST00000374930 URB2Q14146 1524 aaKnown RBP11.94□□□□□ -0.5
NUP35-202ENST00000374930 MRC2Q9UBG0 1479 aa11.94□□□□□ -0.5
NUP35-202ENST00000374930 AKT1S1Q96B36 256 aa11.93□□□□□ -0.5
NUP35-202ENST00000374930 VPS8Q8N3P4 1428 aa11.92□□□□□ -0.5
NUP35-202ENST00000374930 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
NUP35-202ENST00000374930 MIER1Q8N108 512 aa11.89□□□□□ -0.51
NUP35-202ENST00000374930 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
NUP35-202ENST00000374930 KIF21AQ7Z4S6 1674 aa11.87□□□□□ -0.51
NUP35-202ENST00000374930 ZEB1P37275 1124 aaPredicted RBP11.87□□□□□ -0.51
NUP35-202ENST00000374930 GAPVD1Q14C86 1478 aa11.87□□□□□ -0.51
NUP35-202ENST00000374930 IFT140Q96RY7 1462 aa11.87□□□□□ -0.51
NUP35-202ENST00000374930 WDR62O43379 1518 aa11.86□□□□□ -0.51
NUP35-202ENST00000374930 RAD54L2Q9Y4B4 1467 aa11.85□□□□□ -0.51
NUP35-202ENST00000374930 REM2Q8IYK8 340 aaPredicted RBP11.85□□□□□ -0.51
NUP35-202ENST00000374930 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
NUP35-202ENST00000374930 ABCA5Q8WWZ7 1642 aa11.84□□□□□ -0.51
NUP35-202ENST00000374930 TARBP1Q13395 1621 aaKnown RBP11.83□□□□□ -0.52
NUP35-202ENST00000374930 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
NUP35-202ENST00000374930 FHAD1B1AJZ9 1412 aa11.83□□□□□ -0.52
NUP35-202ENST00000374930 EFCAB5A4FU69 1503 aa11.82□□□□□ -0.52
NUP35-202ENST00000374930 MAP3K1Q13233 1512 aa11.82□□□□□ -0.52
NUP35-202ENST00000374930 PKD2Q13563 968 aa11.82□□□□□ -0.52
NUP35-202ENST00000374930 HRCP23327 699 aa11.81□□□□□ -0.52
NUP35-202ENST00000374930 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
NUP35-202ENST00000374930 GRIN2BQ13224 1484 aa11.8□□□□□ -0.52
NUP35-202ENST00000374930 CLEC11AQ9Y240 323 aa11.78□□□□□ -0.52
NUP35-202ENST00000374930 TDRD9Q8NDG6 1382 aaKnown RBP11.78□□□□□ -0.52
NUP35-202ENST00000374930 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.534e-6■■■□□ 15.5
NUP35-202ENST00000374930 ARHGAP35Q9NRY4 1499 aa11.76□□□□□ -0.53
NUP35-202ENST00000374930 FMN1Q68DA7 1419 aa11.75□□□□□ -0.53
NUP35-202ENST00000374930 ARAP1Q96P48 1450 aa11.74□□□□□ -0.53
NUP35-202ENST00000374930 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
NUP35-202ENST00000374930 CTTNBP2Q8WZ74 1663 aa11.73□□□□□ -0.53
NUP35-202ENST00000374930 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
NUP35-202ENST00000374930 MAGI1Q96QZ7 1491 aaPredicted RBP11.71□□□□□ -0.53
NUP35-202ENST00000374930 PRR29P0C7W0 189 aa11.71□□□□□ -0.53
NUP35-202ENST00000374930 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
NUP35-202ENST00000374930 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
NUP35-202ENST00000374930 PBRM1Q86U86 1689 aa11.69□□□□□ -0.54
NUP35-202ENST00000374930 CREBZFQ9NS37 354 aa11.69□□□□□ -0.54
NUP35-202ENST00000374930 FYCO1Q9BQS8 1478 aa11.68□□□□□ -0.54
NUP35-202ENST00000374930 CASKIN1Q8WXD9 1431 aa11.68□□□□□ -0.54
NUP35-202ENST00000374930 ADAMTS12P58397 1594 aa11.67□□□□□ -0.54
NUP35-202ENST00000374930 SLC24A1O60721 1099 aa11.66□□□□□ -0.54
NUP35-202ENST00000374930 KIAA0586Q9BVV6 1533 aa11.65□□□□□ -0.54
NUP35-202ENST00000374930 SAMD9Q5K651 1589 aa11.64□□□□□ -0.55
NUP35-202ENST00000374930 ECM2O94769 699 aaPredicted RBP11.64□□□□□ -0.55
NUP35-202ENST00000374930 MNX1P50219 401 aaPredicted RBP11.64□□□□□ -0.55
NUP35-202ENST00000374930 SYNJ2O15056 1496 aa11.63□□□□□ -0.55
NUP35-202ENST00000374930 UGGT2Q9NYU1 1516 aa11.62□□□□□ -0.55
NUP35-202ENST00000374930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.55
NUP35-202ENST00000374930 IQGAP2Q13576 1575 aa11.62□□□□□ -0.55
NUP35-202ENST00000374930 RANGAP1P46060 587 aaPredicted RBP11.61□□□□□ -0.55
NUP35-202ENST00000374930 NUBP1P53384 320 aa11.61□□□□□ -0.55
NUP35-202ENST00000374930 RRBP1Q9P2E9 1410 aaKnown RBP11.6□□□□□ -0.55
NUP35-202ENST00000374930 TIAM1Q13009 1591 aa11.6□□□□□ -0.55
NUP35-202ENST00000374930 CHMP7Q8WUX9 453 aaPredicted RBP11.6□□□□□ -0.55
NUP35-202ENST00000374930 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
NUP35-202ENST00000374930 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
NUP35-202ENST00000374930 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms