RNA–Protein interactions for RNA: ENST00000369738.8

PIFO-202, Transcript of primary cilia formation, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PIFO, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIFO-202ENST00000369738 LRRC9Q6ZRR7 1453 aa17.14■□□□□ 0.33
PIFO-202ENST00000369738 SETD5Q9C0A6 1442 aa17.13■□□□□ 0.33
PIFO-202ENST00000369738 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
PIFO-202ENST00000369738 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
PIFO-202ENST00000369738 WDR97A6NE52 1622 aa17.12■□□□□ 0.33
PIFO-202ENST00000369738 HIRIP3Q9BW71 556 aaPredicted RBP17.12■□□□□ 0.33
PIFO-202ENST00000369738 DDX10Q13206 875 aaKnown RBP17.11■□□□□ 0.33
PIFO-202ENST00000369738 CADPSQ9ULU8 1353 aa17.08■□□□□ 0.32
PIFO-202ENST00000369738 PRDM2Q13029 1718 aa17.08■□□□□ 0.32
PIFO-202ENST00000369738 MAP3K1Q13233 1512 aa17.07■□□□□ 0.32
PIFO-202ENST00000369738 PCF11O94913 1555 aaKnown RBP17.06■□□□□ 0.32
PIFO-202ENST00000369738 TSHZ2Q9NRE2 1034 aa17.05■□□□□ 0.32
PIFO-202ENST00000369738 FHOD3Q2V2M9 1422 aa17.04■□□□□ 0.32
PIFO-202ENST00000369738 BCANQ96GW7 911 aa17.03■□□□□ 0.32
PIFO-202ENST00000369738 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
PIFO-202ENST00000369738 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
PIFO-202ENST00000369738 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
PIFO-202ENST00000369738 FHAD1B1AJZ9 1412 aa16.99■□□□□ 0.31
PIFO-202ENST00000369738 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
PIFO-202ENST00000369738 FKBP8Q14318 412 aa16.94■□□□□ 0.3
PIFO-202ENST00000369738 TRIM52Q96A61 297 aa16.93■□□□□ 0.3
PIFO-202ENST00000369738 PTPRKQ15262 1439 aa16.9■□□□□ 0.3
PIFO-202ENST00000369738 CASKIN1Q8WXD9 1431 aa16.89■□□□□ 0.29
PIFO-202ENST00000369738 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.29
PIFO-202ENST00000369738 FYCO1Q9BQS8 1478 aa16.89■□□□□ 0.29
PIFO-202ENST00000369738 NESP48681 1621 aa16.88■□□□□ 0.29
PIFO-202ENST00000369738 CC2D2AQ9P2K1 1620 aa16.86■□□□□ 0.29
PIFO-202ENST00000369738 FGD6Q6ZV73 1430 aa16.86■□□□□ 0.29
PIFO-202ENST00000369738 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
PIFO-202ENST00000369738 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
PIFO-202ENST00000369738 TIMELESSQ9UNS1 1208 aa16.85■□□□□ 0.29
PIFO-202ENST00000369738 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.29
PIFO-202ENST00000369738 CCDC18Q5T9S5 1454 aa16.83■□□□□ 0.28
PIFO-202ENST00000369738 SNAPC4Q5SXM2 1469 aa16.82■□□□□ 0.28
PIFO-202ENST00000369738 ANP32CO43423 234 aa16.82■□□□□ 0.28
PIFO-202ENST00000369738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.82■□□□□ 0.28
PIFO-202ENST00000369738 EFCAB5A4FU69 1503 aa16.82■□□□□ 0.28
PIFO-202ENST00000369738 TONSLQ96HA7 1378 aa16.81■□□□□ 0.28
PIFO-202ENST00000369738 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.28
PIFO-202ENST00000369738 LRRIQ1Q96JM4 1722 aa16.81■□□□□ 0.28
PIFO-202ENST00000369738 MTUS2Q5JR59 1369 aa16.8■□□□□ 0.28
PIFO-202ENST00000369738 CTTNBP2Q8WZ74 1663 aa16.8■□□□□ 0.28
PIFO-202ENST00000369738 CCER2I3L3R5 266 aa16.79■□□□□ 0.28
PIFO-202ENST00000369738 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
PIFO-202ENST00000369738 PTPN23Q9H3S7 1636 aa16.77■□□□□ 0.27
PIFO-202ENST00000369738 HFM1A2PYH4 1435 aa16.77■□□□□ 0.27
PIFO-202ENST00000369738 FMN1Q68DA7 1419 aa16.77■□□□□ 0.27
PIFO-202ENST00000369738 NAIPQ13075 1403 aa16.76■□□□□ 0.27
PIFO-202ENST00000369738 UACAQ9BZF9 1416 aa16.76■□□□□ 0.27
PIFO-202ENST00000369738 CUL7Q14999 1698 aa16.75■□□□□ 0.27
PIFO-202ENST00000369738 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
PIFO-202ENST00000369738 KDM5BQ9UGL1 1544 aa16.74■□□□□ 0.27
PIFO-202ENST00000369738 ANP32EQ9BTT0 268 aa16.73■□□□□ 0.27
PIFO-202ENST00000369738 RRP7BPQ9NSQ0 103 aa16.73■□□□□ 0.27
PIFO-202ENST00000369738 CHIC2Q9UKJ5 165 aa16.73■□□□□ 0.27
PIFO-202ENST00000369738 URB2Q14146 1524 aaKnown RBP16.72■□□□□ 0.27
PIFO-202ENST00000369738 MYOM3Q5VTT5 1437 aa16.71■□□□□ 0.26
PIFO-202ENST00000369738 NEFLP07196 543 aa16.7■□□□□ 0.26
PIFO-202ENST00000369738 GRIN2BQ13224 1484 aa16.7■□□□□ 0.26
PIFO-202ENST00000369738 MAGI3Q5TCQ9 1506 aa16.69■□□□□ 0.26
PIFO-202ENST00000369738 RBM19Q9Y4C8 960 aaKnown RBP16.69■□□□□ 0.26
PIFO-202ENST00000369738 SAMD9Q5K651 1589 aa16.69■□□□□ 0.26
PIFO-202ENST00000369738 DENND4BO75064 1496 aaPredicted RBP16.68■□□□□ 0.26
PIFO-202ENST00000369738 IRX6P78412 446 aaPredicted RBP16.67■□□□□ 0.26
PIFO-202ENST00000369738 DNAJC5BQ9UF47 199 aa16.67■□□□□ 0.26
PIFO-202ENST00000369738 WASHC2AQ641Q2 1341 aa16.67■□□□□ 0.26
PIFO-202ENST00000369738 ARID3CA6NKF2 412 aa16.66■□□□□ 0.26
PIFO-202ENST00000369738 HSPA5P11021 654 aaKnown RBP16.66■□□□□ 0.26
PIFO-202ENST00000369738 HNRNPUQ00839 825 aaKnown RBP eCLIP16.66■□□□□ 0.26
PIFO-202ENST00000369738 KDM6BO15054 1643 aa16.65■□□□□ 0.26
PIFO-202ENST00000369738 FOXD1Q16676 465 aa16.65■□□□□ 0.26
PIFO-202ENST00000369738 CCDC184Q52MB2 194 aa16.65■□□□□ 0.26
PIFO-202ENST00000369738 GAPVD1Q14C86 1478 aa16.64■□□□□ 0.25
PIFO-202ENST00000369738 ABCA5Q8WWZ7 1642 aa16.64■□□□□ 0.25
PIFO-202ENST00000369738 SUPT6HQ7KZ85 1726 aaKnown RBP16.63■□□□□ 0.25
PIFO-202ENST00000369738 UGGT2Q9NYU1 1516 aa16.62■□□□□ 0.25
PIFO-202ENST00000369738 C11orf95C9JLR9 678 aaPredicted RBP16.61■□□□□ 0.25
PIFO-202ENST00000369738 EHBP1L1Q8N3D4 1523 aa16.6■□□□□ 0.25
PIFO-202ENST00000369738 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
PIFO-202ENST00000369738 L3MBTL2Q969R5 705 aa16.57■□□□□ 0.24
PIFO-202ENST00000369738 LAMC3Q9Y6N6 1575 aa16.57■□□□□ 0.24
PIFO-202ENST00000369738 MPHOSPH9Q99550 1183 aa16.55■□□□□ 0.24
PIFO-202ENST00000369738 CDK13Q14004 1512 aaKnown RBP16.55■□□□□ 0.24
PIFO-202ENST00000369738 MSH5O43196 834 aa16.54■□□□□ 0.24
PIFO-202ENST00000369738 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
PIFO-202ENST00000369738 EIF4G2P78344 907 aaKnown RBP eCLIP16.53■□□□□ 0.24
PIFO-202ENST00000369738 TCOF1Q13428 1488 aaKnown RBP16.53■□□□□ 0.24
PIFO-202ENST00000369738 GCC2Q8IWJ2 1684 aa16.52■□□□□ 0.24
PIFO-202ENST00000369738 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
PIFO-202ENST00000369738 HECW1Q76N89 1606 aa16.51■□□□□ 0.23
PIFO-202ENST00000369738 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
PIFO-202ENST00000369738 FAM9BQ8IZU0 186 aa16.49■□□□□ 0.23
PIFO-202ENST00000369738 ZNF644Q9H582 1327 aaPredicted RBP16.48■□□□□ 0.23
PIFO-202ENST00000369738 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
PIFO-202ENST00000369738 CNTLNQ9NXG0 1405 aa16.48■□□□□ 0.23
PIFO-202ENST00000369738 TARBP1Q13395 1621 aaKnown RBP16.47■□□□□ 0.23
PIFO-202ENST00000369738 PRKRIP1Q9H875 184 aaPredicted RBP16.47■□□□□ 0.23
PIFO-202ENST00000369738 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
PIFO-202ENST00000369738 NCOA1Q15788 1441 aa16.44■□□□□ 0.22
PIFO-202ENST00000369738 PDS5BQ9NTI5 1447 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms