RNA–Protein interactions for RNA: ENST00000368389.6

MUC1-205, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-205ENST00000368389 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
MUC1-205ENST00000368389 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
MUC1-205ENST00000368389 CFTRP13569 1480 aa12.89□□□□□ -0.35
MUC1-205ENST00000368389 FAM9AQ8IZU1 332 aaPredicted RBP12.88□□□□□ -0.35
MUC1-205ENST00000368389 SYNJ1O43426 1573 aa12.87□□□□□ -0.35
MUC1-205ENST00000368389 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
MUC1-205ENST00000368389 EEA1Q15075 1411 aa12.85□□□□□ -0.35
MUC1-205ENST00000368389 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
MUC1-205ENST00000368389 TOP2BQ02880 1626 aa12.81□□□□□ -0.36
MUC1-205ENST00000368389 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
MUC1-205ENST00000368389 BIVM-ERCC5R4GMW8 1640 aa12.8□□□□□ -0.36
MUC1-205ENST00000368389 SOGA1O94964 1423 aa12.8□□□□□ -0.36
MUC1-205ENST00000368389 CHRDL2Q6WN34 429 aa12.78□□□□□ -0.36
MUC1-205ENST00000368389 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
MUC1-205ENST00000368389 RUSC2Q8N2Y8 1516 aa12.76□□□□□ -0.37
MUC1-205ENST00000368389 CUX1P39880 1505 aa12.75□□□□□ -0.37
MUC1-205ENST00000368389 VASPP50552 380 aaPredicted RBP12.75□□□□□ -0.37
MUC1-205ENST00000368389 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
MUC1-205ENST00000368389 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
MUC1-205ENST00000368389 KIF21BO75037 1637 aa12.66□□□□□ -0.38
MUC1-205ENST00000368389 GOLGA3Q08378 1498 aa12.66□□□□□ -0.38
MUC1-205ENST00000368389 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
MUC1-205ENST00000368389 LAMC3Q9Y6N6 1575 aa12.65□□□□□ -0.38
MUC1-205ENST00000368389 CREBZFQ9NS37 354 aa12.65□□□□□ -0.38
MUC1-205ENST00000368389 CEP164Q9UPV0 1460 aa12.65□□□□□ -0.38
MUC1-205ENST00000368389 MIER1Q8N108 512 aa12.64□□□□□ -0.39
MUC1-205ENST00000368389 PLCD3Q8N3E9 789 aa12.63□□□□□ -0.39
MUC1-205ENST00000368389 PIP4P2Q8N4L2 257 aa12.63□□□□□ -0.39
MUC1-205ENST00000368389 NESP48681 1621 aa12.62□□□□□ -0.39
MUC1-205ENST00000368389 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
MUC1-205ENST00000368389 CEP162Q5TB80 1403 aa12.59□□□□□ -0.39
MUC1-205ENST00000368389 KIF27Q86VH2 1401 aa12.59□□□□□ -0.39
MUC1-205ENST00000368389 DNMBPQ6XZF7 1577 aa12.58□□□□□ -0.4
MUC1-205ENST00000368389 IFNLR1Q8IU57 520 aaPredicted RBP12.58□□□□□ -0.4
MUC1-205ENST00000368389 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
MUC1-205ENST00000368389 FGD5Q6ZNL6 1462 aa12.57□□□□□ -0.4
MUC1-205ENST00000368389 CHADLQ6NUI6 762 aa12.56□□□□□ -0.4
MUC1-205ENST00000368389 PRXQ9BXM0 1461 aa12.56□□□□□ -0.4
MUC1-205ENST00000368389 ERICH3Q5RHP9 1530 aa12.56□□□□□ -0.4
MUC1-205ENST00000368389 PDS5BQ9NTI5 1447 aa12.55□□□□□ -0.4
MUC1-205ENST00000368389 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
MUC1-205ENST00000368389 TOPBP1Q92547 1522 aa12.55□□□□□ -0.4
MUC1-205ENST00000368389 RAPGEF2Q9Y4G8 1499 aa12.54□□□□□ -0.4
MUC1-205ENST00000368389 MNX1P50219 401 aaPredicted RBP12.53□□□□□ -0.4
MUC1-205ENST00000368389 TRIM26Q12899 539 aaPredicted RBP12.52□□□□□ -0.41
MUC1-205ENST00000368389 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.41
MUC1-205ENST00000368389 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
MUC1-205ENST00000368389 CUX2O14529 1486 aa12.52□□□□□ -0.41
MUC1-205ENST00000368389 URB2Q14146 1524 aaKnown RBP12.5□□□□□ -0.41
MUC1-205ENST00000368389 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
MUC1-205ENST00000368389 ABCA10Q8WWZ4 1543 aa12.48□□□□□ -0.41
MUC1-205ENST00000368389 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
MUC1-205ENST00000368389 IGF1RP08069 1367 aa12.47□□□□□ -0.41
MUC1-205ENST00000368389 FARP1Q9Y4F1 1045 aaPredicted RBP12.47□□□□□ -0.41
MUC1-205ENST00000368389 KIF21AQ7Z4S6 1674 aa12.46□□□□□ -0.41
MUC1-205ENST00000368389 RAD54L2Q9Y4B4 1467 aa12.45□□□□□ -0.42
MUC1-205ENST00000368389 CLIP1P30622 1438 aa12.45□□□□□ -0.42
MUC1-205ENST00000368389 WDR97A6NE52 1622 aa12.42□□□□□ -0.42
MUC1-205ENST00000368389 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
MUC1-205ENST00000368389 SPOCK2Q92563 424 aa12.42□□□□□ -0.42
MUC1-205ENST00000368389 CARMIL1Q5VZK9 1371 aa12.4□□□□□ -0.42
MUC1-205ENST00000368389 MRC2Q9UBG0 1479 aa12.39□□□□□ -0.43
MUC1-205ENST00000368389 VPS8Q8N3P4 1428 aa12.37□□□□□ -0.43
MUC1-205ENST00000368389 NUBP1P53384 320 aa12.37□□□□□ -0.43
MUC1-205ENST00000368389 ABCA5Q8WWZ7 1642 aa12.37□□□□□ -0.43
MUC1-205ENST00000368389 POTEHQ6S545 545 aa12.36□□□□□ -0.43
MUC1-205ENST00000368389 CUL7Q14999 1698 aa12.35□□□□□ -0.43
MUC1-205ENST00000368389 TARBP1Q13395 1621 aaKnown RBP12.35□□□□□ -0.43
MUC1-205ENST00000368389 HRCP23327 699 aa12.33□□□□□ -0.44
MUC1-205ENST00000368389 ARAP1Q96P48 1450 aa12.33□□□□□ -0.44
MUC1-205ENST00000368389 WDR62O43379 1518 aa12.32□□□□□ -0.44
MUC1-205ENST00000368389 GAPVD1Q14C86 1478 aa12.32□□□□□ -0.44
MUC1-205ENST00000368389 PPARGC1BQ86YN6 1023 aaKnown RBP12.31□□□□□ -0.44
MUC1-205ENST00000368389 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
MUC1-205ENST00000368389 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
MUC1-205ENST00000368389 ARHGAP35Q9NRY4 1499 aa12.29□□□□□ -0.44
MUC1-205ENST00000368389 IFT140Q96RY7 1462 aa12.27□□□□□ -0.45
MUC1-205ENST00000368389 RANGAP1P46060 587 aaPredicted RBP12.26□□□□□ -0.45
MUC1-205ENST00000368389 ERCC6Q03468 1493 aa12.25□□□□□ -0.45
MUC1-205ENST00000368389 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
MUC1-205ENST00000368389 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
MUC1-205ENST00000368389 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
MUC1-205ENST00000368389 FAM212AQ96EL1 285 aa12.24□□□□□ -0.45
MUC1-205ENST00000368389 PBRM1Q86U86 1689 aa12.22□□□□□ -0.45
MUC1-205ENST00000368389 CTTNBP2Q8WZ74 1663 aa12.22□□□□□ -0.45
MUC1-205ENST00000368389 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
MUC1-205ENST00000368389 GSE1Q14687 1217 aa12.22□□□□□ -0.45
MUC1-205ENST00000368389 EFCAB5A4FU69 1503 aa12.21□□□□□ -0.46
MUC1-205ENST00000368389 GRIN2BQ13224 1484 aa12.21□□□□□ -0.46
MUC1-205ENST00000368389 DCAF8Q5TAQ9 597 aa12.2□□□□□ -0.46
MUC1-205ENST00000368389 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
MUC1-205ENST00000368389 AQRO60306 1485 aaKnown RBP eCLIP12.2□□□□□ -0.46
MUC1-205ENST00000368389 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
MUC1-205ENST00000368389 ADAMTS12P58397 1594 aa12.19□□□□□ -0.46
MUC1-205ENST00000368389 PAK3O75914 559 aaPredicted RBP12.19□□□□□ -0.46
MUC1-205ENST00000368389 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
MUC1-205ENST00000368389 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
MUC1-205ENST00000368389 HAX1O00165 279 aa12.18□□□□□ -0.46
MUC1-205ENST00000368389 ZNF608Q9ULD9 1512 aaPredicted RBP12.17□□□□□ -0.46
MUC1-205ENST00000368389 PKD2Q13563 968 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms