RNA–Protein interactions for RNA: ENST00000360392.4

TRIM9-203, Transcript of tripartite motif containing 9, humanhuman

TSL 1 (best) BASIC

Gene TRIM9, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-203ENST00000360392 ANO8Q9HCE9 1232 aaPredicted RBP13.86□□□□□ -0.19
TRIM9-203ENST00000360392 EIF5BO60841 1220 aaKnown RBP13.86□□□□□ -0.19
TRIM9-203ENST00000360392 RBM19Q9Y4C8 960 aaKnown RBP13.84□□□□□ -0.19
TRIM9-203ENST00000360392 NESP48681 1621 aa13.84□□□□□ -0.19
TRIM9-203ENST00000360392 FGD5Q6ZNL6 1462 aa13.83□□□□□ -0.2
TRIM9-203ENST00000360392 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
TRIM9-203ENST00000360392 IGF1RP08069 1367 aa13.82□□□□□ -0.2
TRIM9-203ENST00000360392 CARMIL1Q5VZK9 1371 aa13.82□□□□□ -0.2
TRIM9-203ENST00000360392 NBR1Q14596 966 aa13.81□□□□□ -0.2
TRIM9-203ENST00000360392 RTL5Q5HYW3 569 aaPredicted RBP13.81□□□□□ -0.2
TRIM9-203ENST00000360392 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
TRIM9-203ENST00000360392 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
TRIM9-203ENST00000360392 RTN4Q9NQC3 1192 aaKnown RBP13.79□□□□□ -0.2
TRIM9-203ENST00000360392 FANCD2Q9BXW9 1451 aa13.78□□□□□ -0.2
TRIM9-203ENST00000360392 ARHGAP35Q9NRY4 1499 aa13.78□□□□□ -0.2
TRIM9-203ENST00000360392 DEKP35659 375 aaKnown RBP13.78□□□□□ -0.2
TRIM9-203ENST00000360392 DDX10Q13206 875 aaKnown RBP13.78□□□□□ -0.2
TRIM9-203ENST00000360392 HIRIP3Q9BW71 556 aaPredicted RBP13.78□□□□□ -0.2
TRIM9-203ENST00000360392 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.21
TRIM9-203ENST00000360392 CDK11AQ9UQ88 783 aaPredicted RBP13.76□□□□□ -0.21
TRIM9-203ENST00000360392 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
TRIM9-203ENST00000360392 TRIM52Q96A61 297 aa13.73□□□□□ -0.21
TRIM9-203ENST00000360392 MYT1LQ9UL68 1186 aa13.72□□□□□ -0.21
TRIM9-203ENST00000360392 KCNH8Q96L42 1107 aa13.7□□□□□ -0.22
TRIM9-203ENST00000360392 SIN3AQ96ST3 1273 aa13.7□□□□□ -0.22
TRIM9-203ENST00000360392 CCNB3Q8WWL7 1395 aa13.7□□□□□ -0.22
TRIM9-203ENST00000360392 FHOD3Q2V2M9 1422 aa13.69□□□□□ -0.22
TRIM9-203ENST00000360392 CNGB1Q14028 1251 aaPredicted RBP13.68□□□□□ -0.22
TRIM9-203ENST00000360392 DHX57Q6P158 1386 aaKnown RBP13.66□□□□□ -0.22
TRIM9-203ENST00000360392 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
TRIM9-203ENST00000360392 ANP32CO43423 234 aa13.65□□□□□ -0.22
TRIM9-203ENST00000360392 FBLN2P98095 1184 aa13.65□□□□□ -0.22
TRIM9-203ENST00000360392 CHIC2Q9UKJ5 165 aa13.65□□□□□ -0.22
TRIM9-203ENST00000360392 SALL2Q9Y467 1007 aaPredicted RBP13.65□□□□□ -0.22
TRIM9-203ENST00000360392 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
TRIM9-203ENST00000360392 PRDM2Q13029 1718 aa13.63□□□□□ -0.23
TRIM9-203ENST00000360392 RAB3GAP2Q9H2M9 1393 aa13.6□□□□□ -0.23
TRIM9-203ENST00000360392 PHLDB1Q86UU1 1377 aa13.6□□□□□ -0.23
TRIM9-203ENST00000360392 IRX6P78412 446 aaPredicted RBP13.6□□□□□ -0.23
TRIM9-203ENST00000360392 RRBP1Q9P2E9 1410 aaKnown RBP13.59□□□□□ -0.23
TRIM9-203ENST00000360392 DNMBPQ6XZF7 1577 aa13.58□□□□□ -0.24
TRIM9-203ENST00000360392 URB2Q14146 1524 aaKnown RBP13.58□□□□□ -0.24
TRIM9-203ENST00000360392 MTUS2Q5JR59 1369 aa13.57□□□□□ -0.24
TRIM9-203ENST00000360392 RRP7BPQ9NSQ0 103 aa13.56□□□□□ -0.24
TRIM9-203ENST00000360392 ABCA10Q8WWZ4 1543 aa13.55□□□□□ -0.24
TRIM9-203ENST00000360392 TIAM1Q13009 1591 aa13.55□□□□□ -0.24
TRIM9-203ENST00000360392 LRRC9Q6ZRR7 1453 aa13.54□□□□□ -0.24
TRIM9-203ENST00000360392 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
TRIM9-203ENST00000360392 POLR3GLQ9BT43 218 aa13.53□□□□□ -0.24
TRIM9-203ENST00000360392 HNRNPUQ00839 825 aaKnown RBP eCLIP13.52□□□□□ -0.24
TRIM9-203ENST00000360392 FHAD1B1AJZ9 1412 aa13.52□□□□□ -0.24
TRIM9-203ENST00000360392 MSH5O43196 834 aa13.49□□□□□ -0.25
TRIM9-203ENST00000360392 AQRO60306 1485 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRIM9-203ENST00000360392 PDS5BQ9NTI5 1447 aa13.49□□□□□ -0.25
TRIM9-203ENST00000360392 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
TRIM9-203ENST00000360392 SETD5Q9C0A6 1442 aa13.48□□□□□ -0.25
TRIM9-203ENST00000360392 TONSLQ96HA7 1378 aa13.46□□□□□ -0.25
TRIM9-203ENST00000360392 ZNF777Q9ULD5 760 aaPredicted RBP13.46□□□□□ -0.25
TRIM9-203ENST00000360392 FOXD1Q16676 465 aa13.46□□□□□ -0.26
TRIM9-203ENST00000360392 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
TRIM9-203ENST00000360392 ANP32AP39687 249 aaKnown RBP13.44□□□□□ -0.26
TRIM9-203ENST00000360392 ERICH6BQ5W0A0 696 aa13.43□□□□□ -0.26
TRIM9-203ENST00000360392 KIF21AQ7Z4S6 1674 aa13.42□□□□□ -0.26
TRIM9-203ENST00000360392 NOP58Q9Y2X3 529 aaKnown RBP13.42□□□□□ -0.26
TRIM9-203ENST00000360392 CASKIN1Q8WXD9 1431 aa13.41□□□□□ -0.26
TRIM9-203ENST00000360392 IL27Q8NEV9 243 aa13.41□□□□□ -0.26
TRIM9-203ENST00000360392 FAM9BQ8IZU0 186 aa13.41□□□□□ -0.26
TRIM9-203ENST00000360392 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
TRIM9-203ENST00000360392 NPM2Q86SE8 214 aaKnown RBP13.4□□□□□ -0.26
TRIM9-203ENST00000360392 GLIPR1L2Q4G1C9 344 aa13.39□□□□□ -0.27
TRIM9-203ENST00000360392 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
TRIM9-203ENST00000360392 FYCO1Q9BQS8 1478 aa13.39□□□□□ -0.27
TRIM9-203ENST00000360392 CHMP7Q8WUX9 453 aaPredicted RBP13.39□□□□□ -0.27
TRIM9-203ENST00000360392 MAPKBP1O60336 1514 aa13.39□□□□□ -0.27
TRIM9-203ENST00000360392 CUL7Q14999 1698 aa13.38□□□□□ -0.27
TRIM9-203ENST00000360392 SENP3-EIF4A1A0A087X0R7 540 aa13.38□□□□□ -0.27
TRIM9-203ENST00000360392 MAP3K1Q13233 1512 aa13.37□□□□□ -0.27
TRIM9-203ENST00000360392 ZNF326Q5BKZ1 582 aaKnown RBP13.37□□□□□ -0.27
TRIM9-203ENST00000360392 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
TRIM9-203ENST00000360392 CTTNBP2Q8WZ74 1663 aa13.36□□□□□ -0.27
TRIM9-203ENST00000360392 UBE2Q2Q8WVN8 375 aa13.36□□□□□ -0.27
TRIM9-203ENST00000360392 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
TRIM9-203ENST00000360392 CFAP43Q8NDM7 1665 aa13.35□□□□□ -0.27
TRIM9-203ENST00000360392 FGD6Q6ZV73 1430 aa13.35□□□□□ -0.27
TRIM9-203ENST00000360392 ZNF644Q9H582 1327 aaPredicted RBP13.35□□□□□ -0.27
TRIM9-203ENST00000360392 ABCA5Q8WWZ7 1642 aa13.34□□□□□ -0.27
TRIM9-203ENST00000360392 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
TRIM9-203ENST00000360392 PTPRKQ15262 1439 aa13.33□□□□□ -0.27
TRIM9-203ENST00000360392 ZNF608Q9ULD9 1512 aaPredicted RBP13.33□□□□□ -0.28
TRIM9-203ENST00000360392 WDR97A6NE52 1622 aa13.33□□□□□ -0.28
TRIM9-203ENST00000360392 PKNOX2Q96KN3 472 aa13.33□□□□□ -0.28
TRIM9-203ENST00000360392 DAXXQ9UER7 740 aaPredicted RBP13.33□□□□□ -0.28
TRIM9-203ENST00000360392 PPP1R15AO75807 674 aaPredicted RBP13.31□□□□□ -0.28
TRIM9-203ENST00000360392 NCOA2Q15596 1464 aa13.31□□□□□ -0.28
TRIM9-203ENST00000360392 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
TRIM9-203ENST00000360392 TIMELESSQ9UNS1 1208 aa13.28□□□□□ -0.28
TRIM9-203ENST00000360392 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
TRIM9-203ENST00000360392 MRS2Q9HD23 443 aa13.28□□□□□ -0.28
TRIM9-203ENST00000360392 CDK13Q14004 1512 aaKnown RBP13.28□□□□□ -0.28
TRIM9-203ENST00000360392 CCER2I3L3R5 266 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms