RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 RAD54L2Q9Y4B4 1467 aa11.92□□□□□ -0.5
CD46-205ENST00000358170 FHOD3Q2V2M9 1422 aa11.89□□□□□ -0.51
CD46-205ENST00000358170 NESP48681 1621 aa11.89□□□□□ -0.51
CD46-205ENST00000358170 PHLDB1Q86UU1 1377 aa11.88□□□□□ -0.51
CD46-205ENST00000358170 TDRD9Q8NDG6 1382 aaKnown RBP11.88□□□□□ -0.51
CD46-205ENST00000358170 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
CD46-205ENST00000358170 RRBP1Q9P2E9 1410 aaKnown RBP11.86□□□□□ -0.51
CD46-205ENST00000358170 FANCD2Q9BXW9 1451 aa11.86□□□□□ -0.51
CD46-205ENST00000358170 CHIC2Q9UKJ5 165 aa11.86□□□□□ -0.51
CD46-205ENST00000358170 BCANQ96GW7 911 aa11.85□□□□□ -0.51
CD46-205ENST00000358170 SETD5Q9C0A6 1442 aa11.82□□□□□ -0.52
CD46-205ENST00000358170 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
CD46-205ENST00000358170 RRP7BPQ9NSQ0 103 aa11.81□□□□□ -0.52
CD46-205ENST00000358170 MTUS2Q5JR59 1369 aa11.8□□□□□ -0.52
CD46-205ENST00000358170 TRIM52Q96A61 297 aa11.8□□□□□ -0.52
CD46-205ENST00000358170 LRRC9Q6ZRR7 1453 aa11.79□□□□□ -0.52
CD46-205ENST00000358170 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
CD46-205ENST00000358170 CNGB1Q14028 1251 aaPredicted RBP11.78□□□□□ -0.52
CD46-205ENST00000358170 POLA1P09884 1462 aaPredicted RBP11.75□□□□□ -0.53
CD46-205ENST00000358170 TIAM1Q13009 1591 aa11.75□□□□□ -0.53
CD46-205ENST00000358170 SUPT16HQ9Y5B9 1047 aaKnown RBP11.75□□□□□ -0.53
CD46-205ENST00000358170 TONSLQ96HA7 1378 aa11.73□□□□□ -0.53
CD46-205ENST00000358170 TOPBP1Q92547 1522 aa11.73□□□□□ -0.53
CD46-205ENST00000358170 FOXD1Q16676 465 aa11.71□□□□□ -0.53
CD46-205ENST00000358170 PPP1R15AO75807 674 aaPredicted RBP11.71□□□□□ -0.53
CD46-205ENST00000358170 PCF11O94913 1555 aaKnown RBP11.7□□□□□ -0.54
CD46-205ENST00000358170 ANP32CO43423 234 aa11.7□□□□□ -0.54
CD46-205ENST00000358170 FBLN2P98095 1184 aa11.7□□□□□ -0.54
CD46-205ENST00000358170 FKBP8Q14318 412 aa11.7□□□□□ -0.54
CD46-205ENST00000358170 MAPKBP1O60336 1514 aa11.69□□□□□ -0.54
CD46-205ENST00000358170 WDR97A6NE52 1622 aa11.69□□□□□ -0.54
CD46-205ENST00000358170 POLR3GLQ9BT43 218 aa11.67□□□□□ -0.54
CD46-205ENST00000358170 FMN1Q68DA7 1419 aa11.65□□□□□ -0.54
CD46-205ENST00000358170 ZNF777Q9ULD5 760 aaPredicted RBP11.65□□□□□ -0.54
CD46-205ENST00000358170 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.55
CD46-205ENST00000358170 CASKIN1Q8WXD9 1431 aa11.64□□□□□ -0.55
CD46-205ENST00000358170 FGD6Q6ZV73 1430 aa11.64□□□□□ -0.55
CD46-205ENST00000358170 DNMBPQ6XZF7 1577 aa11.64□□□□□ -0.55
CD46-205ENST00000358170 URB2Q14146 1524 aaKnown RBP11.64□□□□□ -0.55
CD46-205ENST00000358170 GAPVD1Q14C86 1478 aa11.64□□□□□ -0.55
CD46-205ENST00000358170 ZNF326Q5BKZ1 582 aaKnown RBP11.63□□□□□ -0.55
CD46-205ENST00000358170 PTPRKQ15262 1439 aa11.63□□□□□ -0.55
CD46-205ENST00000358170 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.555e-23■■■■■ 36
CD46-205ENST00000358170 NEFLP07196 543 aa11.62□□□□□ -0.55
CD46-205ENST00000358170 IRX6P78412 446 aaPredicted RBP11.62□□□□□ -0.55
CD46-205ENST00000358170 SENP3-EIF4A1A0A087X0R7 540 aa11.61□□□□□ -0.55
CD46-205ENST00000358170 PDS5BQ9NTI5 1447 aa11.6□□□□□ -0.55
CD46-205ENST00000358170 FYCO1Q9BQS8 1478 aa11.6□□□□□ -0.55
CD46-205ENST00000358170 CCDC18Q5T9S5 1454 aa11.6□□□□□ -0.55
CD46-205ENST00000358170 HNRNPUQ00839 825 aaKnown RBP eCLIP11.59□□□□□ -0.55
CD46-205ENST00000358170 ZNF644Q9H582 1327 aaPredicted RBP11.59□□□□□ -0.55
CD46-205ENST00000358170 MAP3K1Q13233 1512 aa11.59□□□□□ -0.55
CD46-205ENST00000358170 NCOA2Q15596 1464 aa11.58□□□□□ -0.56
CD46-205ENST00000358170 PRDM2Q13029 1718 aa11.57□□□□□ -0.56
CD46-205ENST00000358170 HSPA5P11021 654 aaKnown RBP11.56□□□□□ -0.56
CD46-205ENST00000358170 TIMELESSQ9UNS1 1208 aa11.56□□□□□ -0.56
CD46-205ENST00000358170 MPHOSPH9Q99550 1183 aa11.55□□□□□ -0.56
CD46-205ENST00000358170 L3MBTL2Q969R5 705 aa11.55□□□□□ -0.56
CD46-205ENST00000358170 MYOM3Q5VTT5 1437 aa11.55□□□□□ -0.56
CD46-205ENST00000358170 FAM9BQ8IZU0 186 aa11.54□□□□□ -0.56
CD46-205ENST00000358170 SLC4A1APQ9BWU0 796 aaKnown RBP11.54□□□□□ -0.56
CD46-205ENST00000358170 TSHZ2Q9NRE2 1034 aa11.54□□□□□ -0.56
CD46-205ENST00000358170 EFCAB5A4FU69 1503 aa11.53□□□□□ -0.56
CD46-205ENST00000358170 NAIPQ13075 1403 aa11.53□□□□□ -0.56
CD46-205ENST00000358170 CHMP7Q8WUX9 453 aaPredicted RBP11.52□□□□□ -0.56
CD46-205ENST00000358170 EIF4G2P78344 907 aaKnown RBP eCLIP11.52□□□□□ -0.57
CD46-205ENST00000358170 SNAPC4Q5SXM2 1469 aa11.52□□□□□ -0.57
CD46-205ENST00000358170 UACAQ9BZF9 1416 aa11.52□□□□□ -0.57
CD46-205ENST00000358170 HFM1A2PYH4 1435 aa11.51□□□□□ -0.57
CD46-205ENST00000358170 CDK13Q14004 1512 aaKnown RBP11.5□□□□□ -0.57
CD46-205ENST00000358170 CFAP43Q8NDM7 1665 aa11.5□□□□□ -0.57
CD46-205ENST00000358170 CCDC184Q52MB2 194 aa11.49□□□□□ -0.57
CD46-205ENST00000358170 CUL7Q14999 1698 aa11.49□□□□□ -0.57
CD46-205ENST00000358170 CFDP1Q9UEE9 299 aaPredicted RBP11.48□□□□□ -0.57
CD46-205ENST00000358170 WASHC2AQ641Q2 1341 aa11.48□□□□□ -0.57
CD46-205ENST00000358170 CCER2I3L3R5 266 aa11.48□□□□□ -0.57
CD46-205ENST00000358170 C11orf95C9JLR9 678 aaPredicted RBP11.47□□□□□ -0.57
CD46-205ENST00000358170 CDK11AQ9UQ88 783 aaPredicted RBP11.47□□□□□ -0.57
CD46-205ENST00000358170 KDM2AQ9Y2K7 1162 aa11.47□□□□□ -0.57
CD46-205ENST00000358170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.47□□□□□ -0.573e-6■■□□□ 12.8
CD46-205ENST00000358170 LAMC3Q9Y6N6 1575 aa11.47□□□□□ -0.57
CD46-205ENST00000358170 CTTNBP2Q8WZ74 1663 aa11.46□□□□□ -0.57
CD46-205ENST00000358170 GRIN2BQ13224 1484 aa11.46□□□□□ -0.57
CD46-205ENST00000358170 ZNF608Q9ULD9 1512 aaPredicted RBP11.46□□□□□ -0.58
CD46-205ENST00000358170 MRS2Q9HD23 443 aa11.46□□□□□ -0.58
CD46-205ENST00000358170 NBPF8Q3BBV2 869 aa11.45□□□□□ -0.58
CD46-205ENST00000358170 MAGI3Q5TCQ9 1506 aa11.45□□□□□ -0.58
CD46-205ENST00000358170 PTPN23Q9H3S7 1636 aa11.44□□□□□ -0.58
CD46-205ENST00000358170 EPRSP07814 1512 aaKnown RBP11.43□□□□□ -0.58
CD46-205ENST00000358170 KIF21AQ7Z4S6 1674 aa11.42□□□□□ -0.58
CD46-205ENST00000358170 SUPT6HQ7KZ85 1726 aaKnown RBP11.41□□□□□ -0.58
CD46-205ENST00000358170 EHBP1L1Q8N3D4 1523 aa11.41□□□□□ -0.58
CD46-205ENST00000358170 PKD2Q13563 968 aa11.41□□□□□ -0.58
CD46-205ENST00000358170 ABCA5Q8WWZ7 1642 aa11.4□□□□□ -0.58
CD46-205ENST00000358170 PRG4Q92954 1404 aaPredicted RBP11.39□□□□□ -0.59
CD46-205ENST00000358170 THOC2Q8NI27 1593 aaKnown RBP11.39□□□□□ -0.59
CD46-205ENST00000358170 JPH4Q96JJ6 628 aa11.39□□□□□ -0.59
CD46-205ENST00000358170 ERCC6Q03468 1493 aa11.38□□□□□ -0.59
CD46-205ENST00000358170 UGGT2Q9NYU1 1516 aa11.38□□□□□ -0.59
CD46-205ENST00000358170 SAMD9Q5K651 1589 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms