RNA–Protein interactions for RNA: ENST00000350092.8

PTBP1-202, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-202ENST00000350092 PHLDB1Q86UU1 1377 aa22.92■■□□□ 1.26
PTBP1-202ENST00000350092 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
PTBP1-202ENST00000350092 KCNH8Q96L42 1107 aa22.86■■□□□ 1.25
PTBP1-202ENST00000350092 TSHZ2Q9NRE2 1034 aa22.86■■□□□ 1.25
PTBP1-202ENST00000350092 CARMIL1Q5VZK9 1371 aa22.85■■□□□ 1.25
PTBP1-202ENST00000350092 ITGAEP38570 1179 aa22.85■■□□□ 1.25
PTBP1-202ENST00000350092 FHAD1B1AJZ9 1412 aa22.83■■□□□ 1.25
PTBP1-202ENST00000350092 CTTNBP2Q8WZ74 1663 aa22.78■■□□□ 1.24
PTBP1-202ENST00000350092 FYCO1Q9BQS8 1478 aa22.78■■□□□ 1.24
PTBP1-202ENST00000350092 EFCAB5A4FU69 1503 aa22.77■■□□□ 1.24
PTBP1-202ENST00000350092 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.77■■□□□ 1.245e-7■■■□□ 17.3
PTBP1-202ENST00000350092 CADPSQ9ULU8 1353 aa22.77■■□□□ 1.24
PTBP1-202ENST00000350092 AQRO60306 1485 aaKnown RBP eCLIP22.76■■□□□ 1.231e-8■■■■■ 37.2
PTBP1-202ENST00000350092 PPP1R15AO75807 674 aaPredicted RBP22.75■■□□□ 1.23
PTBP1-202ENST00000350092 TIMELESSQ9UNS1 1208 aa22.73■■□□□ 1.23
PTBP1-202ENST00000350092 CC2D2AQ9P2K1 1620 aa22.73■■□□□ 1.23
PTBP1-202ENST00000350092 SIN3AQ96ST3 1273 aa22.72■■□□□ 1.23
PTBP1-202ENST00000350092 CUL7Q14999 1698 aa22.71■■□□□ 1.23
PTBP1-202ENST00000350092 CASKIN1Q8WXD9 1431 aa22.7■■□□□ 1.23
PTBP1-202ENST00000350092 LRRIQ1Q96JM4 1722 aa22.69■■□□□ 1.22
PTBP1-202ENST00000350092 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
PTBP1-202ENST00000350092 ABCA10Q8WWZ4 1543 aa22.67■■□□□ 1.22
PTBP1-202ENST00000350092 FHOD3Q2V2M9 1422 aa22.67■■□□□ 1.22
PTBP1-202ENST00000350092 DDX10Q13206 875 aaKnown RBP22.66■■□□□ 1.22
PTBP1-202ENST00000350092 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.21
PTBP1-202ENST00000350092 FAM50AQ14320 339 aaKnown RBP22.63■■□□□ 1.21
PTBP1-202ENST00000350092 PTPN23Q9H3S7 1636 aa22.62■■□□□ 1.21
PTBP1-202ENST00000350092 CCER2I3L3R5 266 aa22.61■■□□□ 1.21
PTBP1-202ENST00000350092 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
PTBP1-202ENST00000350092 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
PTBP1-202ENST00000350092 KDM5BQ9UGL1 1544 aa22.6■■□□□ 1.21
PTBP1-202ENST00000350092 SAMD9Q5K651 1589 aa22.59■■□□□ 1.21
PTBP1-202ENST00000350092 CCDC18Q5T9S5 1454 aa22.57■■□□□ 1.2
PTBP1-202ENST00000350092 ANP32EQ9BTT0 268 aa22.56■■□□□ 1.2
PTBP1-202ENST00000350092 POLA1P09884 1462 aaPredicted RBP22.56■■□□□ 1.2
PTBP1-202ENST00000350092 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
PTBP1-202ENST00000350092 TOPBP1Q92547 1522 aa22.55■■□□□ 1.2
PTBP1-202ENST00000350092 HFM1A2PYH4 1435 aa22.55■■□□□ 1.2
PTBP1-202ENST00000350092 FKBP8Q14318 412 aa22.54■■□□□ 1.2
PTBP1-202ENST00000350092 PTPRKQ15262 1439 aa22.54■■□□□ 1.2
PTBP1-202ENST00000350092 UACAQ9BZF9 1416 aa22.53■■□□□ 1.2
PTBP1-202ENST00000350092 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
PTBP1-202ENST00000350092 THOC2Q8NI27 1593 aaKnown RBP22.51■■□□□ 1.19
PTBP1-202ENST00000350092 FMN1Q68DA7 1419 aa22.5■■□□□ 1.19
PTBP1-202ENST00000350092 BCANQ96GW7 911 aa22.49■■□□□ 1.19
PTBP1-202ENST00000350092 KIF21AQ7Z4S6 1674 aa22.48■■□□□ 1.19
PTBP1-202ENST00000350092 SUPT6HQ7KZ85 1726 aaKnown RBP22.47■■□□□ 1.19
PTBP1-202ENST00000350092 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
PTBP1-202ENST00000350092 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
PTBP1-202ENST00000350092 GCC2Q8IWJ2 1684 aa22.47■■□□□ 1.19
PTBP1-202ENST00000350092 HIRIP3Q9BW71 556 aaPredicted RBP22.46■■□□□ 1.19
PTBP1-202ENST00000350092 NAIPQ13075 1403 aa22.46■■□□□ 1.19
PTBP1-202ENST00000350092 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
PTBP1-202ENST00000350092 ANP32CO43423 234 aa22.44■■□□□ 1.18
PTBP1-202ENST00000350092 HECW1Q76N89 1606 aa22.43■■□□□ 1.18
PTBP1-202ENST00000350092 TONSLQ96HA7 1378 aa22.43■■□□□ 1.18
PTBP1-202ENST00000350092 EHBP1L1Q8N3D4 1523 aa22.42■■□□□ 1.18
PTBP1-202ENST00000350092 NCOA2Q15596 1464 aa22.42■■□□□ 1.18
PTBP1-202ENST00000350092 MYOM3Q5VTT5 1437 aa22.42■■□□□ 1.18
PTBP1-202ENST00000350092 UGGT2Q9NYU1 1516 aa22.4■■□□□ 1.18
PTBP1-202ENST00000350092 ATP1B4Q9UN42 357 aaPredicted RBP22.38■■□□□ 1.17
PTBP1-202ENST00000350092 TRIM52Q96A61 297 aa22.38■■□□□ 1.17
PTBP1-202ENST00000350092 DENND4BO75064 1496 aaPredicted RBP22.38■■□□□ 1.17
PTBP1-202ENST00000350092 MAGI3Q5TCQ9 1506 aa22.36■■□□□ 1.17
PTBP1-202ENST00000350092 MTUS2Q5JR59 1369 aa22.35■■□□□ 1.17
PTBP1-202ENST00000350092 TCOF1Q13428 1488 aaKnown RBP22.35■■□□□ 1.17
PTBP1-202ENST00000350092 NEFLP07196 543 aa22.34■■□□□ 1.17
PTBP1-202ENST00000350092 URB2Q14146 1524 aaKnown RBP22.33■■□□□ 1.17
PTBP1-202ENST00000350092 NESP48681 1621 aa22.33■■□□□ 1.17
PTBP1-202ENST00000350092 RBM19Q9Y4C8 960 aaKnown RBP22.33■■□□□ 1.16
PTBP1-202ENST00000350092 KDM6BO15054 1643 aa22.31■■□□□ 1.16
PTBP1-202ENST00000350092 LAMC3Q9Y6N6 1575 aa22.3■■□□□ 1.16
PTBP1-202ENST00000350092 AKNAQ7Z591 1439 aa22.28■■□□□ 1.16
PTBP1-202ENST00000350092 POLR1AO95602 1720 aaPredicted RBP22.25■■□□□ 1.15
PTBP1-202ENST00000350092 GAPVD1Q14C86 1478 aa22.21■■□□□ 1.15
PTBP1-202ENST00000350092 WASHC2AQ641Q2 1341 aa22.21■■□□□ 1.15
PTBP1-202ENST00000350092 CNTLNQ9NXG0 1405 aa22.18■■□□□ 1.14
PTBP1-202ENST00000350092 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
PTBP1-202ENST00000350092 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
PTBP1-202ENST00000350092 HSPA5P11021 654 aaKnown RBP22.15■■□□□ 1.14
PTBP1-202ENST00000350092 TDRD9Q8NDG6 1382 aaKnown RBP22.13■■□□□ 1.13
PTBP1-202ENST00000350092 NCOA1Q15788 1441 aa22.13■■□□□ 1.13
PTBP1-202ENST00000350092 MSH5O43196 834 aa22.12■■□□□ 1.13
PTBP1-202ENST00000350092 WDR62O43379 1518 aa22.12■■□□□ 1.13
PTBP1-202ENST00000350092 HNRNPUQ00839 825 aaKnown RBP eCLIP22.12■■□□□ 1.13
PTBP1-202ENST00000350092 EPRSP07814 1512 aaKnown RBP22.11■■□□□ 1.13
PTBP1-202ENST00000350092 MIA2Q96PC5 1412 aa22.11■■□□□ 1.13
PTBP1-202ENST00000350092 FANCIQ9NVI1 1328 aa22.08■■□□□ 1.13
PTBP1-202ENST00000350092 IQGAP2Q13576 1575 aa22.08■■□□□ 1.13
PTBP1-202ENST00000350092 TEX14Q8IWB6 1497 aa22.08■■□□□ 1.12
PTBP1-202ENST00000350092 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
PTBP1-202ENST00000350092 CDK13Q14004 1512 aaKnown RBP22.06■■□□□ 1.12
PTBP1-202ENST00000350092 DNMT1P26358 1616 aaKnown RBP22.06■■□□□ 1.12
PTBP1-202ENST00000350092 ERICH6BQ5W0A0 696 aa22.05■■□□□ 1.12
PTBP1-202ENST00000350092 ADAMTS12P58397 1594 aa22.05■■□□□ 1.12
PTBP1-202ENST00000350092 CCDC7Q96M83 1385 aa22.04■■□□□ 1.12
PTBP1-202ENST00000350092 RPRD2Q5VT52 1461 aaKnown RBP22.04■■□□□ 1.12
PTBP1-202ENST00000350092 CCDC184Q52MB2 194 aa22.03■■□□□ 1.12
PTBP1-202ENST00000350092 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
PTBP1-202ENST00000350092 SPATA31E1Q6ZUB1 1445 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms