RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 LRRC9Q6ZRR7 1453 aa30.26■■■□□ 2.43
E2F1-201ENST00000343380 MAP3K1Q13233 1512 aa30.24■■■□□ 2.43
E2F1-201ENST00000343380 FAM50AQ14320 339 aaKnown RBP30.22■■■□□ 2.43
E2F1-201ENST00000343380 P3H3Q8IVL6 736 aa30.21■■■□□ 2.43
E2F1-201ENST00000343380 WDR97A6NE52 1622 aa30.2■■■□□ 2.42
E2F1-201ENST00000343380 FGD5Q6ZNL6 1462 aa30.18■■■□□ 2.42
E2F1-201ENST00000343380 DDX10Q13206 875 aaKnown RBP30.17■■■□□ 2.42
E2F1-201ENST00000343380 TSHZ2Q9NRE2 1034 aa30.15■■■□□ 2.42
E2F1-201ENST00000343380 PRDM2Q13029 1718 aa30.13■■■□□ 2.41
E2F1-201ENST00000343380 CADPSQ9ULU8 1353 aa30.12■■■□□ 2.41
E2F1-201ENST00000343380 ATP1B4Q9UN42 357 aaPredicted RBP30.12■■■□□ 2.41
E2F1-201ENST00000343380 PCF11O94913 1555 aaKnown RBP30.08■■■□□ 2.41
E2F1-201ENST00000343380 HIRIP3Q9BW71 556 aaPredicted RBP30.07■■■□□ 2.41
E2F1-201ENST00000343380 FHAD1B1AJZ9 1412 aa30.05■■■□□ 2.4
E2F1-201ENST00000343380 PPP1R15AO75807 674 aaPredicted RBP30.03■■■□□ 2.4
E2F1-201ENST00000343380 CFAP43Q8NDM7 1665 aa30.02■■■□□ 2.4
E2F1-201ENST00000343380 FHOD3Q2V2M9 1422 aa30.01■■■□□ 2.4
E2F1-201ENST00000343380 BCANQ96GW7 911 aa30■■■□□ 2.39
E2F1-201ENST00000343380 DNAJC5BQ9UF47 199 aa29.93■■■□□ 2.38
E2F1-201ENST00000343380 FKBP8Q14318 412 aa29.91■■■□□ 2.38
E2F1-201ENST00000343380 RAD54L2Q9Y4B4 1467 aa29.91■■■□□ 2.38
E2F1-201ENST00000343380 TIMELESSQ9UNS1 1208 aa29.89■■■□□ 2.38
E2F1-201ENST00000343380 FYCO1Q9BQS8 1478 aa29.86■■■□□ 2.37
E2F1-201ENST00000343380 FANCD2Q9BXW9 1451 aa29.85■■■□□ 2.37
E2F1-201ENST00000343380 CASKIN1Q8WXD9 1431 aa29.84■■■□□ 2.37
E2F1-201ENST00000343380 TRIM52Q96A61 297 aa29.83■■■□□ 2.37
E2F1-201ENST00000343380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.8■■■□□ 2.36
E2F1-201ENST00000343380 FGD6Q6ZV73 1430 aa29.77■■■□□ 2.36
E2F1-201ENST00000343380 PTPRKQ15262 1439 aa29.77■■■□□ 2.36
E2F1-201ENST00000343380 ABCA10Q8WWZ4 1543 aa29.76■■■□□ 2.36
E2F1-201ENST00000343380 EFCAB5A4FU69 1503 aa29.76■■■□□ 2.35
E2F1-201ENST00000343380 AQRO60306 1485 aaKnown RBP eCLIP29.76■■■□□ 2.358e-8■■■■■ 31.4
E2F1-201ENST00000343380 POLA1P09884 1462 aaPredicted RBP29.76■■■□□ 2.35
E2F1-201ENST00000343380 CCER2I3L3R5 266 aa29.75■■■□□ 2.35
E2F1-201ENST00000343380 ANP32CO43423 234 aa29.75■■■□□ 2.35
E2F1-201ENST00000343380 TONSLQ96HA7 1378 aa29.71■■■□□ 2.35
E2F1-201ENST00000343380 CCDC18Q5T9S5 1454 aa29.71■■■□□ 2.35
E2F1-201ENST00000343380 DNMBPQ6XZF7 1577 aa29.71■■■□□ 2.35
E2F1-201ENST00000343380 TOPBP1Q92547 1522 aa29.7■■■□□ 2.34
E2F1-201ENST00000343380 SNAPC4Q5SXM2 1469 aa29.69■■■□□ 2.34
E2F1-201ENST00000343380 ANP32EQ9BTT0 268 aa29.66■■■□□ 2.34
E2F1-201ENST00000343380 MTUS2Q5JR59 1369 aa29.66■■■□□ 2.34
E2F1-201ENST00000343380 HFM1A2PYH4 1435 aa29.65■■■□□ 2.34
E2F1-201ENST00000343380 FMN1Q68DA7 1419 aa29.65■■■□□ 2.34
E2F1-201ENST00000343380 NESP48681 1621 aa29.63■■■□□ 2.33
E2F1-201ENST00000343380 UACAQ9BZF9 1416 aa29.63■■■□□ 2.33
E2F1-201ENST00000343380 CTTNBP2Q8WZ74 1663 aa29.63■■■□□ 2.33
E2F1-201ENST00000343380 LAMC3Q9Y6N6 1575 aa29.62■■■□□ 2.33
E2F1-201ENST00000343380 NEFLP07196 543 aa29.61■■■□□ 2.33
E2F1-201ENST00000343380 CUL7Q14999 1698 aa29.6■■■□□ 2.33
E2F1-201ENST00000343380 PTPN23Q9H3S7 1636 aa29.6■■■□□ 2.33
E2F1-201ENST00000343380 NAIPQ13075 1403 aa29.59■■■□□ 2.33
E2F1-201ENST00000343380 LRRIQ1Q96JM4 1722 aa29.56■■■□□ 2.32
E2F1-201ENST00000343380 NCOA2Q15596 1464 aa29.55■■■□□ 2.32
E2F1-201ENST00000343380 KDM5BQ9UGL1 1544 aa29.54■■■□□ 2.32
E2F1-201ENST00000343380 MYOM3Q5VTT5 1437 aa29.52■■■□□ 2.32
E2F1-201ENST00000343380 RBM19Q9Y4C8 960 aaKnown RBP29.51■■■□□ 2.31
E2F1-201ENST00000343380 TDRD9Q8NDG6 1382 aaKnown RBP29.51■■■□□ 2.31
E2F1-201ENST00000343380 GRIN2BQ13224 1484 aa29.48■■■□□ 2.31
E2F1-201ENST00000343380 SAMD9Q5K651 1589 aa29.46■■■□□ 2.31
E2F1-201ENST00000343380 RRP7BPQ9NSQ0 103 aa29.45■■■□□ 2.3
E2F1-201ENST00000343380 URB2Q14146 1524 aaKnown RBP29.43■■■□□ 2.3
E2F1-201ENST00000343380 CHIC2Q9UKJ5 165 aa29.42■■■□□ 2.3
E2F1-201ENST00000343380 HNRNPUQ00839 825 aaKnown RBP eCLIP29.4■■■□□ 2.39e-6■■■□□ 18.8
E2F1-201ENST00000343380 WASHC2AQ641Q2 1341 aa29.4■■■□□ 2.3
E2F1-201ENST00000343380 MAGI3Q5TCQ9 1506 aa29.39■■■□□ 2.3
E2F1-201ENST00000343380 DENND4BO75064 1496 aaPredicted RBP29.39■■■□□ 2.3
E2F1-201ENST00000343380 HSPA5P11021 654 aaKnown RBP29.38■■■□□ 2.29
E2F1-201ENST00000343380 SUPT6HQ7KZ85 1726 aaKnown RBP29.37■■■□□ 2.29
E2F1-201ENST00000343380 IRX6P78412 446 aaPredicted RBP29.35■■■□□ 2.29
E2F1-201ENST00000343380 UGGT2Q9NYU1 1516 aa29.35■■■□□ 2.29
E2F1-201ENST00000343380 ABCA5Q8WWZ7 1642 aa29.34■■■□□ 2.29
E2F1-201ENST00000343380 EHBP1L1Q8N3D4 1523 aa29.34■■■□□ 2.29
E2F1-201ENST00000343380 GAPVD1Q14C86 1478 aa29.34■■■□□ 2.29
E2F1-201ENST00000343380 PDS5BQ9NTI5 1447 aa29.34■■■□□ 2.29
E2F1-201ENST00000343380 ARHGEF11O15085 1522 aa29.31■■■□□ 2.28
E2F1-201ENST00000343380 THOC2Q8NI27 1593 aaKnown RBP29.29■■■□□ 2.28
E2F1-201ENST00000343380 KDM6BO15054 1643 aa29.29■■■□□ 2.28
E2F1-201ENST00000343380 CCDC184Q52MB2 194 aa29.29■■■□□ 2.28
E2F1-201ENST00000343380 FOXD1Q16676 465 aa29.25■■■□□ 2.27
E2F1-201ENST00000343380 C11orf95C9JLR9 678 aaPredicted RBP29.23■■■□□ 2.27
E2F1-201ENST00000343380 TCOF1Q13428 1488 aaKnown RBP29.22■■■□□ 2.27
E2F1-201ENST00000343380 EIF4G2P78344 907 aaKnown RBP eCLIP29.22■■■□□ 2.275e-9■■■□□ 17.8
E2F1-201ENST00000343380 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
E2F1-201ENST00000343380 L3MBTL2Q969R5 705 aa29.21■■■□□ 2.27
E2F1-201ENST00000343380 ARID3CA6NKF2 412 aa29.21■■■□□ 2.27
E2F1-201ENST00000343380 MPHOSPH9Q99550 1183 aa29.21■■■□□ 2.27
E2F1-201ENST00000343380 MSH5O43196 834 aa29.2■■■□□ 2.27
E2F1-201ENST00000343380 HECW1Q76N89 1606 aa29.19■■■□□ 2.26
E2F1-201ENST00000343380 GCC2Q8IWJ2 1684 aa29.18■■■□□ 2.26
E2F1-201ENST00000343380 CNTLNQ9NXG0 1405 aa29.14■■■□□ 2.26
E2F1-201ENST00000343380 CDK13Q14004 1512 aaKnown RBP29.13■■■□□ 2.25
E2F1-201ENST00000343380 EPRSP07814 1512 aaKnown RBP29.12■■■□□ 2.25
E2F1-201ENST00000343380 AKNAQ7Z591 1439 aa29.11■■■□□ 2.25
E2F1-201ENST00000343380 NBPF8Q3BBV2 869 aa29.09■■■□□ 2.25
E2F1-201ENST00000343380 PRKRIP1Q9H875 184 aaPredicted RBP29.09■■■□□ 2.25
E2F1-201ENST00000343380 CCDC7Q96M83 1385 aa29.08■■■□□ 2.25
E2F1-201ENST00000343380 NCOA1Q15788 1441 aa29.07■■■□□ 2.24
E2F1-201ENST00000343380 FAM9BQ8IZU0 186 aa29.07■■■□□ 2.24
E2F1-201ENST00000343380 CDK11AQ9UQ88 783 aaPredicted RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms