RNA–Protein interactions for RNA: ENST00000342558.3

PPP3CB-201, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

TSL 5 BASIC

Gene PPP3CB, Length 2,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-201ENST00000342558 APLP2Q06481 763 aa22.51■■□□□ 1.19
PPP3CB-201ENST00000342558 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
PPP3CB-201ENST00000342558 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
PPP3CB-201ENST00000342558 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
PPP3CB-201ENST00000342558 ABCA10Q8WWZ4 1543 aa22.38■■□□□ 1.17
PPP3CB-201ENST00000342558 BCL11AQ9H165 835 aa22.35■■□□□ 1.17
PPP3CB-201ENST00000342558 ARAP1Q96P48 1450 aa22.24■■□□□ 1.15
PPP3CB-201ENST00000342558 MRC2Q9UBG0 1479 aa22.23■■□□□ 1.15
PPP3CB-201ENST00000342558 RRBP1Q9P2E9 1410 aaKnown RBP22.23■■□□□ 1.15
PPP3CB-201ENST00000342558 WDR97A6NE52 1622 aa22.23■■□□□ 1.15
PPP3CB-201ENST00000342558 P3H3Q8IVL6 736 aa22.22■■□□□ 1.15
PPP3CB-201ENST00000342558 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
PPP3CB-201ENST00000342558 ERCC6Q03468 1493 aa22.21■■□□□ 1.15
PPP3CB-201ENST00000342558 KCNH8Q96L42 1107 aa22.21■■□□□ 1.15
PPP3CB-201ENST00000342558 ARHGAP35Q9NRY4 1499 aa22.19■■□□□ 1.14
PPP3CB-201ENST00000342558 AQRO60306 1485 aaKnown RBP eCLIP22.18■■□□□ 1.14
PPP3CB-201ENST00000342558 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
PPP3CB-201ENST00000342558 KANK4Q5T7N3 995 aaPredicted RBP22.17■■□□□ 1.14
PPP3CB-201ENST00000342558 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
PPP3CB-201ENST00000342558 BCANQ96GW7 911 aa22.15■■□□□ 1.14
PPP3CB-201ENST00000342558 FKBP8Q14318 412 aa22.14■■□□□ 1.13
PPP3CB-201ENST00000342558 CUL7Q14999 1698 aa22.1■■□□□ 1.13
PPP3CB-201ENST00000342558 ZNF608Q9ULD9 1512 aaPredicted RBP22.09■■□□□ 1.13
PPP3CB-201ENST00000342558 RBM19Q9Y4C8 960 aaKnown RBP22.08■■□□□ 1.12
PPP3CB-201ENST00000342558 CCNB3Q8WWL7 1395 aa22.08■■□□□ 1.12
PPP3CB-201ENST00000342558 WDR62O43379 1518 aa22.06■■□□□ 1.12
PPP3CB-201ENST00000342558 ATP1B4Q9UN42 357 aaPredicted RBP22.06■■□□□ 1.12
PPP3CB-201ENST00000342558 MAPKBP1O60336 1514 aa22.05■■□□□ 1.12
PPP3CB-201ENST00000342558 NEFLP07196 543 aa22■■□□□ 1.11
PPP3CB-201ENST00000342558 PBRM1Q86U86 1689 aa22■■□□□ 1.11
PPP3CB-201ENST00000342558 FHOD3Q2V2M9 1422 aa21.99■■□□□ 1.11
PPP3CB-201ENST00000342558 RAB3GAP2Q9H2M9 1393 aa21.98■■□□□ 1.11
PPP3CB-201ENST00000342558 IFT140Q96RY7 1462 aa21.98■■□□□ 1.11
PPP3CB-201ENST00000342558 CTTNBP2Q8WZ74 1663 aa21.97■■□□□ 1.11
PPP3CB-201ENST00000342558 THOC2Q8NI27 1593 aaKnown RBP21.97■■□□□ 1.11
PPP3CB-201ENST00000342558 DDX10Q13206 875 aaKnown RBP21.96■■□□□ 1.11
PPP3CB-201ENST00000342558 PPP1R15AO75807 674 aaPredicted RBP21.94■■□□□ 1.1
PPP3CB-201ENST00000342558 GRIN2BQ13224 1484 aa21.93■■□□□ 1.1
PPP3CB-201ENST00000342558 CCER2I3L3R5 266 aa21.91■■□□□ 1.1
PPP3CB-201ENST00000342558 FHAD1B1AJZ9 1412 aa21.9■■□□□ 1.1
PPP3CB-201ENST00000342558 ITGAEP38570 1179 aa21.9■■□□□ 1.1
PPP3CB-201ENST00000342558 FBLN2P98095 1184 aa21.88■■□□□ 1.09
PPP3CB-201ENST00000342558 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
PPP3CB-201ENST00000342558 SETD5Q9C0A6 1442 aa21.86■■□□□ 1.09
PPP3CB-201ENST00000342558 ADAMTS12P58397 1594 aa21.86■■□□□ 1.09
PPP3CB-201ENST00000342558 MSH5O43196 834 aa21.86■■□□□ 1.09
PPP3CB-201ENST00000342558 SNAPC4Q5SXM2 1469 aa21.85■■□□□ 1.09
PPP3CB-201ENST00000342558 PCF11O94913 1555 aaKnown RBP21.83■■□□□ 1.09
PPP3CB-201ENST00000342558 TRIM52Q96A61 297 aa21.82■■□□□ 1.08
PPP3CB-201ENST00000342558 TIMELESSQ9UNS1 1208 aa21.82■■□□□ 1.08
PPP3CB-201ENST00000342558 EFCAB5A4FU69 1503 aa21.81■■□□□ 1.08
PPP3CB-201ENST00000342558 FANCIQ9NVI1 1328 aa21.8■■□□□ 1.08
PPP3CB-201ENST00000342558 ANP32CO43423 234 aa21.79■■□□□ 1.08
PPP3CB-201ENST00000342558 MAP3K1Q13233 1512 aa21.79■■□□□ 1.08
PPP3CB-201ENST00000342558 SIN3AQ96ST3 1273 aa21.79■■□□□ 1.08
PPP3CB-201ENST00000342558 TIAM1Q13009 1591 aa21.78■■□□□ 1.08
PPP3CB-201ENST00000342558 CHMP7Q8WUX9 453 aaPredicted RBP21.78■■□□□ 1.08
PPP3CB-201ENST00000342558 SAMD9Q5K651 1589 aa21.74■■□□□ 1.07
PPP3CB-201ENST00000342558 IQGAP2Q13576 1575 aa21.73■■□□□ 1.07
PPP3CB-201ENST00000342558 ARID3CA6NKF2 412 aa21.72■■□□□ 1.07
PPP3CB-201ENST00000342558 FMN1Q68DA7 1419 aa21.72■■□□□ 1.07
PPP3CB-201ENST00000342558 LRRC9Q6ZRR7 1453 aa21.72■■□□□ 1.07
PPP3CB-201ENST00000342558 CASKIN1Q8WXD9 1431 aa21.72■■□□□ 1.07
PPP3CB-201ENST00000342558 GRIN2AQ12879 1464 aa21.7■■□□□ 1.06
PPP3CB-201ENST00000342558 FYCO1Q9BQS8 1478 aa21.69■■□□□ 1.06
PPP3CB-201ENST00000342558 HIRIP3Q9BW71 556 aaPredicted RBP21.68■■□□□ 1.06
PPP3CB-201ENST00000342558 PHLDB1Q86UU1 1377 aa21.67■■□□□ 1.06
PPP3CB-201ENST00000342558 CDK11AQ9UQ88 783 aaPredicted RBP21.65■■□□□ 1.06
PPP3CB-201ENST00000342558 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.06
PPP3CB-201ENST00000342558 CFAP43Q8NDM7 1665 aa21.63■■□□□ 1.05
PPP3CB-201ENST00000342558 SYNJ2O15056 1496 aa21.62■■□□□ 1.05
PPP3CB-201ENST00000342558 LRRIQ1Q96JM4 1722 aa21.62■■□□□ 1.05
PPP3CB-201ENST00000342558 FAM50AQ14320 339 aaKnown RBP21.62■■□□□ 1.05
PPP3CB-201ENST00000342558 KIAA0586Q9BVV6 1533 aa21.62■■□□□ 1.05
PPP3CB-201ENST00000342558 ERICH6Q7L0X2 663 aa21.61■■□□□ 1.05
PPP3CB-201ENST00000342558 CEP170Q5SW79 1584 aa21.59■■□□□ 1.05
PPP3CB-201ENST00000342558 MYT1LQ9UL68 1186 aa21.58■■□□□ 1.04
PPP3CB-201ENST00000342558 MTUS2Q5JR59 1369 aa21.57■■□□□ 1.04
PPP3CB-201ENST00000342558 UGGT2Q9NYU1 1516 aa21.55■■□□□ 1.04
PPP3CB-201ENST00000342558 ERICH6BQ5W0A0 696 aa21.55■■□□□ 1.04
PPP3CB-201ENST00000342558 DISP1Q96F81 1524 aa21.55■■□□□ 1.04
PPP3CB-201ENST00000342558 HNRNPUQ00839 825 aaKnown RBP eCLIP21.53■■□□□ 1.04
PPP3CB-201ENST00000342558 JPH4Q96JJ6 628 aa21.53■■□□□ 1.04
PPP3CB-201ENST00000342558 TONSLQ96HA7 1378 aa21.51■■□□□ 1.03
PPP3CB-201ENST00000342558 IRX6P78412 446 aaPredicted RBP21.51■■□□□ 1.03
PPP3CB-201ENST00000342558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.51■■□□□ 1.03
PPP3CB-201ENST00000342558 KIAA0556O60303 1618 aa21.49■■□□□ 1.03
PPP3CB-201ENST00000342558 CDK13Q14004 1512 aaKnown RBP21.48■■□□□ 1.03
PPP3CB-201ENST00000342558 PPP4R2Q9NY27 417 aa21.47■■□□□ 1.03
PPP3CB-201ENST00000342558 MAGI3Q5TCQ9 1506 aa21.46■■□□□ 1.03
PPP3CB-201ENST00000342558 NUP160Q12769 1436 aa21.46■■□□□ 1.03
PPP3CB-201ENST00000342558 EPRSP07814 1512 aaKnown RBP21.45■■□□□ 1.02
PPP3CB-201ENST00000342558 HECW1Q76N89 1606 aa21.43■■□□□ 1.02
PPP3CB-201ENST00000342558 NCOA2Q15596 1464 aa21.42■■□□□ 1.02
PPP3CB-201ENST00000342558 DEKP35659 375 aaKnown RBP21.4■■□□□ 1.02
PPP3CB-201ENST00000342558 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.01
PPP3CB-201ENST00000342558 PLB1Q6P1J6 1458 aa21.39■■□□□ 1.01
PPP3CB-201ENST00000342558 UACAQ9BZF9 1416 aa21.39■■□□□ 1.01
PPP3CB-201ENST00000342558 FGD6Q6ZV73 1430 aa21.38■■□□□ 1.01
PPP3CB-201ENST00000342558 CHD1O14646 1710 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms