RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 FBLN2P98095 1184 aa10.43□□□□□ -0.74
ZNF28-201ENST00000339844 FGD5Q6ZNL6 1462 aa10.42□□□□□ -0.74
ZNF28-201ENST00000339844 IFT140Q96RY7 1462 aa10.42□□□□□ -0.74
ZNF28-201ENST00000339844 ZNF608Q9ULD9 1512 aaPredicted RBP10.42□□□□□ -0.74
ZNF28-201ENST00000339844 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
ZNF28-201ENST00000339844 WRNQ14191 1432 aaPredicted RBP eCLIP10.41□□□□□ -0.74
ZNF28-201ENST00000339844 TARBP1Q13395 1621 aaKnown RBP10.4□□□□□ -0.75
ZNF28-201ENST00000339844 SYNJ1O43426 1573 aa10.39□□□□□ -0.75
ZNF28-201ENST00000339844 SOGA1O94964 1423 aa10.39□□□□□ -0.75
ZNF28-201ENST00000339844 TOP2BQ02880 1626 aa10.36□□□□□ -0.75
ZNF28-201ENST00000339844 AQRO60306 1485 aaKnown RBP eCLIP10.36□□□□□ -0.75
ZNF28-201ENST00000339844 ZBTB12Q9Y330 459 aaPredicted RBP10.36□□□□□ -0.75
ZNF28-201ENST00000339844 BIVM-ERCC5R4GMW8 1640 aa10.36□□□□□ -0.75
ZNF28-201ENST00000339844 TDRD9Q8NDG6 1382 aaKnown RBP10.35□□□□□ -0.75
ZNF28-201ENST00000339844 EIF4G3O43432 1585 aaKnown RBP10.35□□□□□ -0.75
ZNF28-201ENST00000339844 ABCA10Q8WWZ4 1543 aa10.32□□□□□ -0.76
ZNF28-201ENST00000339844 DSG3P32926 999 aa10.31□□□□□ -0.76
ZNF28-201ENST00000339844 WDR97A6NE52 1622 aa10.31□□□□□ -0.76
ZNF28-201ENST00000339844 HRCP23327 699 aa10.28□□□□□ -0.76
ZNF28-201ENST00000339844 MKRN4PQ13434 485 aaPredicted RBP10.27□□□□□ -0.77
ZNF28-201ENST00000339844 DNAJC5Q9H3Z4 198 aa10.27□□□□□ -0.77
ZNF28-201ENST00000339844 GAPVD1Q14C86 1478 aa10.27□□□□□ -0.77
ZNF28-201ENST00000339844 ABCA5Q8WWZ7 1642 aa10.26□□□□□ -0.77
ZNF28-201ENST00000339844 GRIN2BQ13224 1484 aa10.25□□□□□ -0.77
ZNF28-201ENST00000339844 SNAPC4Q5SXM2 1469 aa10.25□□□□□ -0.77
ZNF28-201ENST00000339844 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
ZNF28-201ENST00000339844 PBRM1Q86U86 1689 aa10.22□□□□□ -0.77
ZNF28-201ENST00000339844 OSCARQ8IYS5 282 aa10.21□□□□□ -0.77
ZNF28-201ENST00000339844 MAGI1Q96QZ7 1491 aaPredicted RBP10.21□□□□□ -0.78
ZNF28-201ENST00000339844 TRIM41Q8WV44 630 aa10.2□□□□□ -0.78
ZNF28-201ENST00000339844 CHD1O14646 1710 aa10.19□□□□□ -0.78
ZNF28-201ENST00000339844 SYNJ2O15056 1496 aa10.18□□□□□ -0.78
ZNF28-201ENST00000339844 KIF27Q86VH2 1401 aa10.18□□□□□ -0.78
ZNF28-201ENST00000339844 ERICH3Q5RHP9 1530 aa10.17□□□□□ -0.78
ZNF28-201ENST00000339844 CHMP7Q8WUX9 453 aaPredicted RBP10.17□□□□□ -0.78
ZNF28-201ENST00000339844 ADAMTS12P58397 1594 aa10.17□□□□□ -0.78
ZNF28-201ENST00000339844 IGF1RP08069 1367 aa10.16□□□□□ -0.78
ZNF28-201ENST00000339844 RUSC2Q8N2Y8 1516 aa10.16□□□□□ -0.78
ZNF28-201ENST00000339844 FHAD1B1AJZ9 1412 aa10.15□□□□□ -0.79
ZNF28-201ENST00000339844 GRIN2AQ12879 1464 aa10.13□□□□□ -0.79
ZNF28-201ENST00000339844 CLASP1Q7Z460 1538 aa10.1□□□□□ -0.79
ZNF28-201ENST00000339844 NUP160Q12769 1436 aa10.09□□□□□ -0.79
ZNF28-201ENST00000339844 CARMIL1Q5VZK9 1371 aa10.09□□□□□ -0.79
ZNF28-201ENST00000339844 CEP170Q5SW79 1584 aa10.09□□□□□ -0.79
ZNF28-201ENST00000339844 ZNF692Q9BU19 519 aaPredicted RBP10.08□□□□□ -0.8
ZNF28-201ENST00000339844 FBXO3Q9UK99 471 aa10.08□□□□□ -0.8
ZNF28-201ENST00000339844 CUL7Q14999 1698 aa10.07□□□□□ -0.8
ZNF28-201ENST00000339844 PCGF6Q9BYE7 350 aa10.06□□□□□ -0.8
ZNF28-201ENST00000339844 ARHGEF11O15085 1522 aa10.06□□□□□ -0.8
ZNF28-201ENST00000339844 SPDYE2BA6NHP3 402 aa10.05□□□□□ -0.8
ZNF28-201ENST00000339844 SPDYE6P0CI01 402 aa10.05□□□□□ -0.8
ZNF28-201ENST00000339844 SPDYE2Q495Y8 402 aa10.05□□□□□ -0.8
ZNF28-201ENST00000339844 RIMBP3CA6NJZ7 1639 aa10.04□□□□□ -0.8
ZNF28-201ENST00000339844 RIMBP3BA6NNM3 1639 aa10.04□□□□□ -0.8
ZNF28-201ENST00000339844 RIMBP3Q9UFD9 1639 aa10.04□□□□□ -0.8
ZNF28-201ENST00000339844 TRIM26Q12899 539 aaPredicted RBP10.04□□□□□ -0.8
ZNF28-201ENST00000339844 ZEB1P37275 1124 aaPredicted RBP10.02□□□□□ -0.81
ZNF28-201ENST00000339844 FAM9AQ8IZU1 332 aaPredicted RBP10.02□□□□□ -0.81
ZNF28-201ENST00000339844 PRXQ9BXM0 1461 aa10.02□□□□□ -0.81
ZNF28-201ENST00000339844 RAPGEF2Q9Y4G8 1499 aa10.02□□□□□ -0.81
ZNF28-201ENST00000339844 ERCC6L2Q5T890 1561 aa10.01□□□□□ -0.81
ZNF28-201ENST00000339844 ARAP1Q96P48 1450 aa10□□□□□ -0.81
ZNF28-201ENST00000339844 EEA1Q15075 1411 aa9.99□□□□□ -0.81
ZNF28-201ENST00000339844 KIAA0586Q9BVV6 1533 aa9.99□□□□□ -0.81
ZNF28-201ENST00000339844 SHROOM2Q13796 1616 aa9.99□□□□□ -0.81
ZNF28-201ENST00000339844 JPH4Q96JJ6 628 aa9.98□□□□□ -0.81
ZNF28-201ENST00000339844 CYB5RLQ6IPT4 315 aa9.97□□□□□ -0.81
ZNF28-201ENST00000339844 PROM2Q8N271 834 aa9.96□□□□□ -0.82
ZNF28-201ENST00000339844 PRG4Q92954 1404 aaPredicted RBP9.96□□□□□ -0.82
ZNF28-201ENST00000339844 LOC105371045A0A1W2PR82 267 aa9.95□□□□□ -0.82
ZNF28-201ENST00000339844 IQGAP2Q13576 1575 aa9.93□□□□□ -0.82
ZNF28-201ENST00000339844 RBM42Q9BTD8 480 aaKnown RBP9.92□□□□□ -0.82
ZNF28-201ENST00000339844 SSUH2Q9Y2M2 353 aa9.92□□□□□ -0.82
ZNF28-201ENST00000339844 KIF21BO75037 1637 aa9.9□□□□□ -0.82
ZNF28-201ENST00000339844 UGGT2Q9NYU1 1516 aa9.9□□□□□ -0.82
ZNF28-201ENST00000339844 DISP1Q96F81 1524 aa9.89□□□□□ -0.83
ZNF28-201ENST00000339844 AMER1Q5JTC6 1135 aaPredicted RBP9.89□□□□□ -0.83
ZNF28-201ENST00000339844 CTTNBP2Q8WZ74 1663 aa9.89□□□□□ -0.83
ZNF28-201ENST00000339844 VASPP50552 380 aaPredicted RBP9.86□□□□□ -0.83
ZNF28-201ENST00000339844 CARMIL2Q6F5E8 1435 aa9.86□□□□□ -0.83
ZNF28-201ENST00000339844 CHRDL2Q6WN34 429 aa9.86□□□□□ -0.83
ZNF28-201ENST00000339844 KIAA0556O60303 1618 aa9.85□□□□□ -0.83
ZNF28-201ENST00000339844 GOLGA3Q08378 1498 aa9.85□□□□□ -0.83
ZNF28-201ENST00000339844 TTBK1Q5TCY1 1321 aaPredicted RBP9.85□□□□□ -0.83
ZNF28-201ENST00000339844 STAG3Q9UJ98 1225 aa9.85□□□□□ -0.83
ZNF28-201ENST00000339844 TNIKQ9UKE5 1360 aa9.85□□□□□ -0.83
ZNF28-201ENST00000339844 PTPRGP23470 1445 aa9.84□□□□□ -0.83
ZNF28-201ENST00000339844 UBTFP17480 764 aaKnown RBP9.83□□□□□ -0.84
ZNF28-201ENST00000339844 RANGAP1P46060 587 aaPredicted RBP9.83□□□□□ -0.84
ZNF28-201ENST00000339844 P3H3Q8IVL6 736 aa9.82□□□□□ -0.84
ZNF28-201ENST00000339844 SP7Q8TDD2 431 aaPredicted RBP9.82□□□□□ -0.84
ZNF28-201ENST00000339844 RTN4Q9NQC3 1192 aaKnown RBP9.8□□□□□ -0.84
ZNF28-201ENST00000339844 ADCY10Q96PN6 1610 aa9.8□□□□□ -0.84
ZNF28-201ENST00000339844 SAMD9Q5K651 1589 aa9.8□□□□□ -0.84
ZNF28-201ENST00000339844 AKT1S1Q96B36 256 aa9.79□□□□□ -0.84
ZNF28-201ENST00000339844 PPARGC1BQ86YN6 1023 aaKnown RBP9.78□□□□□ -0.84
ZNF28-201ENST00000339844 PLCD3Q8N3E9 789 aa9.78□□□□□ -0.84
ZNF28-201ENST00000339844 FHOD3Q2V2M9 1422 aa9.78□□□□□ -0.84
ZNF28-201ENST00000339844 UACAQ9BZF9 1416 aa9.78□□□□□ -0.84
ZNF28-201ENST00000339844 PLB1Q6P1J6 1458 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms