RNA–Protein interactions for RNA: ENST00000339140.4

FOXR2-201, Transcript of forkhead box R2, humanhuman

APPRIS P1 BASIC

Gene FOXR2, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2-201ENST00000339140 RAPGEF2Q9Y4G8 1499 aa12.98□□□□□ -0.33
FOXR2-201ENST00000339140 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
FOXR2-201ENST00000339140 ERICH3Q5RHP9 1530 aa12.95□□□□□ -0.34
FOXR2-201ENST00000339140 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
FOXR2-201ENST00000339140 RRBP1Q9P2E9 1410 aaKnown RBP12.95□□□□□ -0.34
FOXR2-201ENST00000339140 ABCA10Q8WWZ4 1543 aa12.95□□□□□ -0.34
FOXR2-201ENST00000339140 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
FOXR2-201ENST00000339140 RAD54L2Q9Y4B4 1467 aa12.93□□□□□ -0.34
FOXR2-201ENST00000339140 TARBP1Q13395 1621 aaKnown RBP12.91□□□□□ -0.34
FOXR2-201ENST00000339140 BCL11AQ9H165 835 aa12.9□□□□□ -0.35
FOXR2-201ENST00000339140 ARAP1Q96P48 1450 aa12.88□□□□□ -0.35
FOXR2-201ENST00000339140 ABCA5Q8WWZ7 1642 aa12.86□□□□□ -0.35
FOXR2-201ENST00000339140 IFT140Q96RY7 1462 aa12.86□□□□□ -0.35
FOXR2-201ENST00000339140 NEFLP07196 543 aa12.86□□□□□ -0.35
FOXR2-201ENST00000339140 CCNB3Q8WWL7 1395 aa12.85□□□□□ -0.35
FOXR2-201ENST00000339140 PRXQ9BXM0 1461 aa12.85□□□□□ -0.35
FOXR2-201ENST00000339140 IGF1RP08069 1367 aa12.84□□□□□ -0.35
FOXR2-201ENST00000339140 FKBP8Q14318 412 aa12.82□□□□□ -0.36
FOXR2-201ENST00000339140 GAPVD1Q14C86 1478 aa12.81□□□□□ -0.36
FOXR2-201ENST00000339140 KANK4Q5T7N3 995 aaPredicted RBP12.8□□□□□ -0.36
FOXR2-201ENST00000339140 CUL7Q14999 1698 aa12.8□□□□□ -0.36
FOXR2-201ENST00000339140 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
FOXR2-201ENST00000339140 TIMELESSQ9UNS1 1208 aa12.8□□□□□ -0.36
FOXR2-201ENST00000339140 PBRM1Q86U86 1689 aa12.79□□□□□ -0.36
FOXR2-201ENST00000339140 RANGAP1P46060 587 aaPredicted RBP12.79□□□□□ -0.36
FOXR2-201ENST00000339140 CCER2I3L3R5 266 aa12.78□□□□□ -0.36
FOXR2-201ENST00000339140 RBM19Q9Y4C8 960 aaKnown RBP12.78□□□□□ -0.36
FOXR2-201ENST00000339140 MAPKBP1O60336 1514 aa12.78□□□□□ -0.36
FOXR2-201ENST00000339140 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.36
FOXR2-201ENST00000339140 MAP3K1Q13233 1512 aa12.77□□□□□ -0.37
FOXR2-201ENST00000339140 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
FOXR2-201ENST00000339140 ZNF608Q9ULD9 1512 aaPredicted RBP12.76□□□□□ -0.37
FOXR2-201ENST00000339140 BCANQ96GW7 911 aa12.76□□□□□ -0.37
FOXR2-201ENST00000339140 AQRO60306 1485 aaKnown RBP eCLIP12.75□□□□□ -0.37
FOXR2-201ENST00000339140 EIF4G3O43432 1585 aaKnown RBP12.74□□□□□ -0.37
FOXR2-201ENST00000339140 KCNH8Q96L42 1107 aa12.74□□□□□ -0.37
FOXR2-201ENST00000339140 GRIN2BQ13224 1484 aa12.73□□□□□ -0.37
FOXR2-201ENST00000339140 SETD5Q9C0A6 1442 aa12.73□□□□□ -0.37
FOXR2-201ENST00000339140 ANP32CO43423 234 aa12.71□□□□□ -0.37
FOXR2-201ENST00000339140 PPP1R15AO75807 674 aaPredicted RBP12.71□□□□□ -0.37
FOXR2-201ENST00000339140 DDX10Q13206 875 aaKnown RBP12.71□□□□□ -0.37
FOXR2-201ENST00000339140 ARHGAP35Q9NRY4 1499 aa12.7□□□□□ -0.38
FOXR2-201ENST00000339140 MYT1LQ9UL68 1186 aa12.69□□□□□ -0.38
FOXR2-201ENST00000339140 ADAMTS12P58397 1594 aa12.69□□□□□ -0.38
FOXR2-201ENST00000339140 TIAM1Q13009 1591 aa12.69□□□□□ -0.38
FOXR2-201ENST00000339140 FANCIQ9NVI1 1328 aa12.68□□□□□ -0.38
FOXR2-201ENST00000339140 FHAD1B1AJZ9 1412 aa12.68□□□□□ -0.38
FOXR2-201ENST00000339140 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
FOXR2-201ENST00000339140 ITGAEP38570 1179 aa12.65□□□□□ -0.38
FOXR2-201ENST00000339140 CTTNBP2Q8WZ74 1663 aa12.65□□□□□ -0.38
FOXR2-201ENST00000339140 SNAPC4Q5SXM2 1469 aa12.64□□□□□ -0.39
FOXR2-201ENST00000339140 ERICH6BQ5W0A0 696 aa12.64□□□□□ -0.39
FOXR2-201ENST00000339140 LRRC9Q6ZRR7 1453 aa12.62□□□□□ -0.39
FOXR2-201ENST00000339140 ERICH6Q7L0X2 663 aa12.62□□□□□ -0.39
FOXR2-201ENST00000339140 CDK11AQ9UQ88 783 aaPredicted RBP12.62□□□□□ -0.39
FOXR2-201ENST00000339140 TRIM52Q96A61 297 aa12.61□□□□□ -0.39
FOXR2-201ENST00000339140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.6□□□□□ -0.39
FOXR2-201ENST00000339140 SYNJ2O15056 1496 aa12.6□□□□□ -0.39
FOXR2-201ENST00000339140 CFAP43Q8NDM7 1665 aa12.59□□□□□ -0.39
FOXR2-201ENST00000339140 SIN3AQ96ST3 1273 aa12.58□□□□□ -0.4
FOXR2-201ENST00000339140 GRIN2AQ12879 1464 aa12.57□□□□□ -0.4
FOXR2-201ENST00000339140 MSH5O43196 834 aa12.57□□□□□ -0.4
FOXR2-201ENST00000339140 PHLDB1Q86UU1 1377 aa12.55□□□□□ -0.4
FOXR2-201ENST00000339140 TONSLQ96HA7 1378 aa12.54□□□□□ -0.4
FOXR2-201ENST00000339140 FAM50AQ14320 339 aaKnown RBP12.53□□□□□ -0.4
FOXR2-201ENST00000339140 CHMP7Q8WUX9 453 aaPredicted RBP12.53□□□□□ -0.4
FOXR2-201ENST00000339140 EFCAB5A4FU69 1503 aa12.52□□□□□ -0.41
FOXR2-201ENST00000339140 IQGAP2Q13576 1575 aa12.51□□□□□ -0.41
FOXR2-201ENST00000339140 CHD1O14646 1710 aa12.51□□□□□ -0.41
FOXR2-201ENST00000339140 KIAA0586Q9BVV6 1533 aa12.51□□□□□ -0.41
FOXR2-201ENST00000339140 NUP160Q12769 1436 aa12.5□□□□□ -0.41
FOXR2-201ENST00000339140 CEP170Q5SW79 1584 aa12.5□□□□□ -0.41
FOXR2-201ENST00000339140 PPP4R2Q9NY27 417 aa12.5□□□□□ -0.41
FOXR2-201ENST00000339140 SAMD9Q5K651 1589 aa12.49□□□□□ -0.41
FOXR2-201ENST00000339140 HNRNPUQ00839 825 aaKnown RBP eCLIP12.49□□□□□ -0.41
FOXR2-201ENST00000339140 UGGT2Q9NYU1 1516 aa12.48□□□□□ -0.41
FOXR2-201ENST00000339140 FYCO1Q9BQS8 1478 aa12.48□□□□□ -0.41
FOXR2-201ENST00000339140 PCF11O94913 1555 aaKnown RBP12.47□□□□□ -0.41
FOXR2-201ENST00000339140 UACAQ9BZF9 1416 aa12.47□□□□□ -0.41
FOXR2-201ENST00000339140 FBLN2P98095 1184 aa12.47□□□□□ -0.41
FOXR2-201ENST00000339140 HIRIP3Q9BW71 556 aaPredicted RBP12.46□□□□□ -0.42
FOXR2-201ENST00000339140 CCDC18Q5T9S5 1454 aa12.45□□□□□ -0.42
FOXR2-201ENST00000339140 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
FOXR2-201ENST00000339140 CASKIN1Q8WXD9 1431 aa12.42□□□□□ -0.42
FOXR2-201ENST00000339140 FGD6Q6ZV73 1430 aa12.42□□□□□ -0.42
FOXR2-201ENST00000339140 PTPN23Q9H3S7 1636 aa12.4□□□□□ -0.42
FOXR2-201ENST00000339140 FHOD3Q2V2M9 1422 aa12.4□□□□□ -0.42
FOXR2-201ENST00000339140 KIAA0556O60303 1618 aa12.39□□□□□ -0.43
FOXR2-201ENST00000339140 DISP1Q96F81 1524 aa12.39□□□□□ -0.43
FOXR2-201ENST00000339140 DEKP35659 375 aaKnown RBP12.39□□□□□ -0.43
FOXR2-201ENST00000339140 NCOA2Q15596 1464 aa12.39□□□□□ -0.43
FOXR2-201ENST00000339140 FMN1Q68DA7 1419 aa12.39□□□□□ -0.43
FOXR2-201ENST00000339140 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
FOXR2-201ENST00000339140 JPH4Q96JJ6 628 aa12.38□□□□□ -0.43
FOXR2-201ENST00000339140 CNTLNQ9NXG0 1405 aa12.37□□□□□ -0.43
FOXR2-201ENST00000339140 SHROOM2Q13796 1616 aa12.37□□□□□ -0.43
FOXR2-201ENST00000339140 IRX6P78412 446 aaPredicted RBP12.37□□□□□ -0.43
FOXR2-201ENST00000339140 ZBED9Q6R2W3 1325 aa12.37□□□□□ -0.43
FOXR2-201ENST00000339140 NOP58Q9Y2X3 529 aaKnown RBP12.37□□□□□ -0.43
FOXR2-201ENST00000339140 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms