RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 SENP3-EIF4A1A0A087X0R7 540 aa9.08□□□□□ -0.96
HMG20A-201ENST00000336216 DNAJC5BQ9UF47 199 aa9.08□□□□□ -0.96
HMG20A-201ENST00000336216 RRP7BPQ9NSQ0 103 aa9.08□□□□□ -0.96
HMG20A-201ENST00000336216 ANP32CO43423 234 aa9.07□□□□□ -0.96
HMG20A-201ENST00000336216 CUX1P39880 1505 aa9.07□□□□□ -0.96
HMG20A-201ENST00000336216 BIVM-ERCC5R4GMW8 1640 aa9.06□□□□□ -0.96
HMG20A-201ENST00000336216 PRDM2Q13029 1718 aa9.06□□□□□ -0.96
HMG20A-201ENST00000336216 BCL11AQ9H165 835 aa9.06□□□□□ -0.96
HMG20A-201ENST00000336216 TSHZ2Q9NRE2 1034 aa9.06□□□□□ -0.96
HMG20A-201ENST00000336216 CUX2O14529 1486 aa9.05□□□□□ -0.96
HMG20A-201ENST00000336216 NESP48681 1621 aa9.05□□□□□ -0.96
HMG20A-201ENST00000336216 IRX6P78412 446 aaPredicted RBP9.05□□□□□ -0.96
HMG20A-201ENST00000336216 KANK4Q5T7N3 995 aaPredicted RBP9.05□□□□□ -0.96
HMG20A-201ENST00000336216 SENP3Q9H4L4 574 aaPredicted RBP9.04□□□□□ -0.96
HMG20A-201ENST00000336216 KCNH8Q96L42 1107 aa9.04□□□□□ -0.96
HMG20A-201ENST00000336216 SIN3AQ96ST3 1273 aa9.04□□□□□ -0.96
HMG20A-201ENST00000336216 FGD5Q6ZNL6 1462 aa9.03□□□□□ -0.96
HMG20A-201ENST00000336216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.02□□□□□ -0.97
HMG20A-201ENST00000336216 CHMP7Q8WUX9 453 aaPredicted RBP9.02□□□□□ -0.97
HMG20A-201ENST00000336216 RAPGEF2Q9Y4G8 1499 aa9.02□□□□□ -0.97
HMG20A-201ENST00000336216 DNMBPQ6XZF7 1577 aa9.01□□□□□ -0.97
HMG20A-201ENST00000336216 MTUS2Q5JR59 1369 aa9.01□□□□□ -0.97
HMG20A-201ENST00000336216 SALL2Q9Y467 1007 aaPredicted RBP9.01□□□□□ -0.97
HMG20A-201ENST00000336216 ERCC6Q03468 1493 aa9.01□□□□□ -0.97
HMG20A-201ENST00000336216 KDM2AQ9Y2K7 1162 aa9.01□□□□□ -0.97
HMG20A-201ENST00000336216 KIF21BO75037 1637 aa9□□□□□ -0.97
HMG20A-201ENST00000336216 TONSLQ96HA7 1378 aa8.99□□□□□ -0.97
HMG20A-201ENST00000336216 TOPBP1Q92547 1522 aa8.99□□□□□ -0.97
HMG20A-201ENST00000336216 CDK11AQ9UQ88 783 aaPredicted RBP8.99□□□□□ -0.97
HMG20A-201ENST00000336216 FAM9BQ8IZU0 186 aa8.98□□□□□ -0.97
HMG20A-201ENST00000336216 CARMIL1Q5VZK9 1371 aa8.97□□□□□ -0.97
HMG20A-201ENST00000336216 CLSPNQ9HAW4 1339 aa8.97□□□□□ -0.97
HMG20A-201ENST00000336216 ERICH3Q5RHP9 1530 aa8.96□□□□□ -0.98
HMG20A-201ENST00000336216 HNRNPUQ00839 825 aaKnown RBP eCLIP8.95□□□□□ -0.98
HMG20A-201ENST00000336216 POLA1P09884 1462 aaPredicted RBP8.95□□□□□ -0.98
HMG20A-201ENST00000336216 MRC2Q9UBG0 1479 aa8.94□□□□□ -0.98
HMG20A-201ENST00000336216 CHGAP10645 457 aaKnown RBP8.94□□□□□ -0.98
HMG20A-201ENST00000336216 PLPPR3Q6T4P5 718 aa8.94□□□□□ -0.98
HMG20A-201ENST00000336216 RBM19Q9Y4C8 960 aaKnown RBP8.94□□□□□ -0.98
HMG20A-201ENST00000336216 TDRD9Q8NDG6 1382 aaKnown RBP8.94□□□□□ -0.98
HMG20A-201ENST00000336216 PRXQ9BXM0 1461 aa8.93□□□□□ -0.98
HMG20A-201ENST00000336216 RAD54L2Q9Y4B4 1467 aa8.93□□□□□ -0.98
HMG20A-201ENST00000336216 IGF1RP08069 1367 aa8.93□□□□□ -0.98
HMG20A-201ENST00000336216 ABCA10Q8WWZ4 1543 aa8.93□□□□□ -0.98
HMG20A-201ENST00000336216 RGL3Q3MIN7 710 aa8.92□□□□□ -0.98
HMG20A-201ENST00000336216 URB2Q14146 1524 aaKnown RBP8.92□□□□□ -0.98
HMG20A-201ENST00000336216 NBR1Q14596 966 aa8.92□□□□□ -0.98
HMG20A-201ENST00000336216 FOXD1Q16676 465 aa8.91□□□□□ -0.98
HMG20A-201ENST00000336216 TSPY4P0CV99 314 aa8.9□□□□□ -0.99
HMG20A-201ENST00000336216 TSPY10P0CW01 314 aa8.9□□□□□ -0.99
HMG20A-201ENST00000336216 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
HMG20A-201ENST00000336216 VPS8Q8N3P4 1428 aa8.89□□□□□ -0.99
HMG20A-201ENST00000336216 KIF21AQ7Z4S6 1674 aa8.88□□□□□ -0.99
HMG20A-201ENST00000336216 IFT140Q96RY7 1462 aa8.86□□□□□ -0.99
HMG20A-201ENST00000336216 CFDP1Q9UEE9 299 aaPredicted RBP8.86□□□□□ -0.99
HMG20A-201ENST00000336216 RTL5Q5HYW3 569 aaPredicted RBP8.85□□□□□ -0.99
HMG20A-201ENST00000336216 CCNB3Q8WWL7 1395 aa8.85□□□□□ -0.99
HMG20A-201ENST00000336216 PLEKHD1A6NEE1 506 aa8.85□□□□□ -0.99
HMG20A-201ENST00000336216 MRS2Q9HD23 443 aa8.85□□□□□ -0.99
HMG20A-201ENST00000336216 CUL7Q14999 1698 aa8.85□□□□□ -0.99
HMG20A-201ENST00000336216 NPM2Q86SE8 214 aaKnown RBP8.83□□□□□ -1
HMG20A-201ENST00000336216 ARAP1Q96P48 1450 aa8.83□□□□□ -1
HMG20A-201ENST00000336216 FHAD1B1AJZ9 1412 aa8.82□□□□□ -1
HMG20A-201ENST00000336216 GRIN2BQ13224 1484 aa8.82□□□□□ -1
HMG20A-201ENST00000336216 EIF4G2P78344 907 aaKnown RBP eCLIP8.82□□□□□ -1
HMG20A-201ENST00000336216 DAXXQ9UER7 740 aaPredicted RBP8.82□□□□□ -1
HMG20A-201ENST00000336216 DHX57Q6P158 1386 aaKnown RBP8.82□□□□□ -1
HMG20A-201ENST00000336216 TMC1Q8TDI8 760 aa8.81□□□□□ -1
HMG20A-201ENST00000336216 AQRO60306 1485 aaKnown RBP eCLIP8.8□□□□□ -14e-6■■■■□ 24.4
HMG20A-201ENST00000336216 NPM1P06748 294 aaKnown RBP eCLIP8.8□□□□□ -1
HMG20A-201ENST00000336216 WDR62O43379 1518 aa8.8□□□□□ -1
HMG20A-201ENST00000336216 B4GALNT3Q6L9W6 998 aa8.79□□□□□ -1
HMG20A-201ENST00000336216 ARHGAP35Q9NRY4 1499 aa8.79□□□□□ -1
HMG20A-201ENST00000336216 SLC24A1O60721 1099 aa8.78□□□□□ -1
HMG20A-201ENST00000336216 FHOD3Q2V2M9 1422 aa8.78□□□□□ -1
HMG20A-201ENST00000336216 RTN4Q9NQC3 1192 aaKnown RBP8.77□□□□□ -1.01
HMG20A-201ENST00000336216 ABCA5Q8WWZ7 1642 aa8.77□□□□□ -1.01
HMG20A-201ENST00000336216 RAB3GAP2Q9H2M9 1393 aa8.77□□□□□ -1.01
HMG20A-201ENST00000336216 FMN1Q68DA7 1419 aa8.76□□□□□ -1.01
HMG20A-201ENST00000336216 EFCAB5A4FU69 1503 aa8.76□□□□□ -1.01
HMG20A-201ENST00000336216 STAG3Q9UJ98 1225 aa8.76□□□□□ -1.01
HMG20A-201ENST00000336216 WDR97A6NE52 1622 aa8.75□□□□□ -1.01
HMG20A-201ENST00000336216 DEKP35659 375 aaKnown RBP8.75□□□□□ -1.01
HMG20A-201ENST00000336216 TARBP1Q13395 1621 aaKnown RBP8.75□□□□□ -1.01
HMG20A-201ENST00000336216 PLEKHG5O94827 1062 aa8.75□□□□□ -1.01
HMG20A-201ENST00000336216 ANP32AP39687 249 aaKnown RBP8.74□□□□□ -1.01
HMG20A-201ENST00000336216 CANXP27824 592 aaKnown RBP8.73□□□□□ -1.01
HMG20A-201ENST00000336216 CARD11Q9BXL7 1154 aa8.73□□□□□ -1.01
HMG20A-201ENST00000336216 DCAF11Q8TEB1 546 aa8.73□□□□□ -1.01
HMG20A-201ENST00000336216 SNAPC4Q5SXM2 1469 aa8.72□□□□□ -1.01
HMG20A-201ENST00000336216 ZNF608Q9ULD9 1512 aaPredicted RBP8.72□□□□□ -1.01
HMG20A-201ENST00000336216 CCDC136Q96JN2 1154 aa8.72□□□□□ -1.01
HMG20A-201ENST00000336216 MAGI1Q96QZ7 1491 aaPredicted RBP8.72□□□□□ -1.01
HMG20A-201ENST00000336216 PBRM1Q86U86 1689 aa8.71□□□□□ -1.02
HMG20A-201ENST00000336216 SETD5Q9C0A6 1442 aa8.71□□□□□ -1.02
HMG20A-201ENST00000336216 MSH5O43196 834 aa8.7□□□□□ -1.02
HMG20A-201ENST00000336216 CTTNBP2Q8WZ74 1663 aa8.7□□□□□ -1.02
HMG20A-201ENST00000336216 THOC2Q8NI27 1593 aaKnown RBP8.7□□□□□ -1.02
HMG20A-201ENST00000336216 PKD2Q13563 968 aa8.7□□□□□ -1.02
HMG20A-201ENST00000336216 ZBTB47Q9UFB7 747 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms