RNA–Protein interactions for RNA: ENST00000328205.9

LIN9-201, Transcript of lin-9 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN9, Length 3,567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN9-201ENST00000328205 ARHGAP35Q9NRY4 1499 aa21.45■■□□□ 1.02
LIN9-201ENST00000328205 RAB3GAP2Q9H2M9 1393 aa21.44■■□□□ 1.02
LIN9-201ENST00000328205 CHIC2Q9UKJ5 165 aa21.4■■□□□ 1.02
LIN9-201ENST00000328205 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
LIN9-201ENST00000328205 CLSPNQ9HAW4 1339 aa21.36■■□□□ 1.01
LIN9-201ENST00000328205 RAD54L2Q9Y4B4 1467 aa21.36■■□□□ 1.01
LIN9-201ENST00000328205 FHOD3Q2V2M9 1422 aa21.36■■□□□ 1.01
LIN9-201ENST00000328205 ERICH3Q5RHP9 1530 aa21.35■■□□□ 1.01
LIN9-201ENST00000328205 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
LIN9-201ENST00000328205 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
LIN9-201ENST00000328205 TRIM52Q96A61 297 aa21.32■■□□□ 1
LIN9-201ENST00000328205 PHLDB1Q86UU1 1377 aa21.32■■□□□ 1
LIN9-201ENST00000328205 HMGXB3Q12766 1538 aa21.31■■□□□ 1
LIN9-201ENST00000328205 BIVM-ERCC5R4GMW8 1640 aa21.29■■□□□ 1
LIN9-201ENST00000328205 RRP7BPQ9NSQ0 103 aa21.27■■□□□ 1
LIN9-201ENST00000328205 NESP48681 1621 aa21.27■■□□□ 1
LIN9-201ENST00000328205 RRBP1Q9P2E9 1410 aaKnown RBP21.27■■□□□ 1
LIN9-201ENST00000328205 MTUS2Q5JR59 1369 aa21.27■■□□□ 1
LIN9-201ENST00000328205 SETD5Q9C0A6 1442 aa21.26■□□□□ 0.99
LIN9-201ENST00000328205 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
LIN9-201ENST00000328205 SENP3-EIF4A1A0A087X0R7 540 aa21.24■□□□□ 0.99
LIN9-201ENST00000328205 FHAD1B1AJZ9 1412 aa21.18■□□□□ 0.98
LIN9-201ENST00000328205 TONSLQ96HA7 1378 aa21.17■□□□□ 0.98
LIN9-201ENST00000328205 ANP32CO43423 234 aa21.16■□□□□ 0.98
LIN9-201ENST00000328205 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
LIN9-201ENST00000328205 FKBP8Q14318 412 aa21.14■□□□□ 0.98
LIN9-201ENST00000328205 FBLN2P98095 1184 aa21.13■□□□□ 0.97
LIN9-201ENST00000328205 POLR3GLQ9BT43 218 aa21.13■□□□□ 0.97
LIN9-201ENST00000328205 CC2D2AQ9P2K1 1620 aa21.11■□□□□ 0.97
LIN9-201ENST00000328205 FOXD1Q16676 465 aa21.1■□□□□ 0.97
LIN9-201ENST00000328205 NEFLP07196 543 aa21.09■□□□□ 0.97
LIN9-201ENST00000328205 PPP1R15AO75807 674 aaPredicted RBP21.08■□□□□ 0.97
LIN9-201ENST00000328205 TIAM1Q13009 1591 aa21.05■□□□□ 0.96
LIN9-201ENST00000328205 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
LIN9-201ENST00000328205 ZNF777Q9ULD5 760 aaPredicted RBP21.03■□□□□ 0.96
LIN9-201ENST00000328205 ZNF326Q5BKZ1 582 aaKnown RBP21.03■□□□□ 0.96
LIN9-201ENST00000328205 RBM19Q9Y4C8 960 aaKnown RBP21.01■□□□□ 0.95
LIN9-201ENST00000328205 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
LIN9-201ENST00000328205 IRX6P78412 446 aaPredicted RBP20.99■□□□□ 0.95
LIN9-201ENST00000328205 WDR97A6NE52 1622 aa20.97■□□□□ 0.95
LIN9-201ENST00000328205 HNRNPUQ00839 825 aaKnown RBP eCLIP20.95■□□□□ 0.94
LIN9-201ENST00000328205 PCF11O94913 1555 aaKnown RBP20.95■□□□□ 0.94
LIN9-201ENST00000328205 MAPKBP1O60336 1514 aa20.94■□□□□ 0.94
LIN9-201ENST00000328205 FMN1Q68DA7 1419 aa20.93■□□□□ 0.94
LIN9-201ENST00000328205 FGD6Q6ZV73 1430 aa20.9■□□□□ 0.94
LIN9-201ENST00000328205 CASKIN1Q8WXD9 1431 aa20.88■□□□□ 0.93
LIN9-201ENST00000328205 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
LIN9-201ENST00000328205 FAM9BQ8IZU0 186 aa20.87■□□□□ 0.93
LIN9-201ENST00000328205 MSH5O43196 834 aa20.86■□□□□ 0.93
LIN9-201ENST00000328205 AQRO60306 1485 aaKnown RBP eCLIP20.86■□□□□ 0.932e-6■■■■■ 42.7
LIN9-201ENST00000328205 ABCA10Q8WWZ4 1543 aa20.84■□□□□ 0.93
LIN9-201ENST00000328205 CCDC18Q5T9S5 1454 aa20.84■□□□□ 0.93
LIN9-201ENST00000328205 HSPA5P11021 654 aaKnown RBP20.84■□□□□ 0.93
LIN9-201ENST00000328205 PTPRKQ15262 1439 aa20.83■□□□□ 0.93
LIN9-201ENST00000328205 TIMELESSQ9UNS1 1208 aa20.83■□□□□ 0.93
LIN9-201ENST00000328205 PDS5BQ9NTI5 1447 aa20.83■□□□□ 0.93
LIN9-201ENST00000328205 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.92
LIN9-201ENST00000328205 ZNF644Q9H582 1327 aaPredicted RBP20.83■□□□□ 0.92
LIN9-201ENST00000328205 DNMBPQ6XZF7 1577 aa20.82■□□□□ 0.92
LIN9-201ENST00000328205 URB2Q14146 1524 aaKnown RBP20.8■□□□□ 0.92
LIN9-201ENST00000328205 MPHOSPH9Q99550 1183 aa20.8■□□□□ 0.92
LIN9-201ENST00000328205 FYCO1Q9BQS8 1478 aa20.8■□□□□ 0.92
LIN9-201ENST00000328205 L3MBTL2Q969R5 705 aa20.8■□□□□ 0.92
LIN9-201ENST00000328205 EIF4G2P78344 907 aaKnown RBP eCLIP20.79■□□□□ 0.92
LIN9-201ENST00000328205 NCOA2Q15596 1464 aa20.79■□□□□ 0.92
LIN9-201ENST00000328205 CHMP7Q8WUX9 453 aaPredicted RBP20.77■□□□□ 0.92
LIN9-201ENST00000328205 MAP3K1Q13233 1512 aa20.74■□□□□ 0.91
LIN9-201ENST00000328205 MYOM3Q5VTT5 1437 aa20.74■□□□□ 0.91
LIN9-201ENST00000328205 CDK11AQ9UQ88 783 aaPredicted RBP20.72■□□□□ 0.91
LIN9-201ENST00000328205 PRKCSHP14314 528 aaPredicted RBP20.71■□□□□ 0.91
LIN9-201ENST00000328205 CFDP1Q9UEE9 299 aaPredicted RBP20.71■□□□□ 0.91
LIN9-201ENST00000328205 MRS2Q9HD23 443 aa20.7■□□□□ 0.9
LIN9-201ENST00000328205 KDM2AQ9Y2K7 1162 aa20.7■□□□□ 0.9
LIN9-201ENST00000328205 NAIPQ13075 1403 aa20.69■□□□□ 0.9
LIN9-201ENST00000328205 UACAQ9BZF9 1416 aa20.69■□□□□ 0.9
LIN9-201ENST00000328205 CCER2I3L3R5 266 aa20.69■□□□□ 0.9
LIN9-201ENST00000328205 ERICH6Q7L0X2 663 aa20.68■□□□□ 0.9
LIN9-201ENST00000328205 CCDC184Q52MB2 194 aa20.66■□□□□ 0.9
LIN9-201ENST00000328205 EFCAB5A4FU69 1503 aa20.66■□□□□ 0.9
LIN9-201ENST00000328205 WASHC2AQ641Q2 1341 aa20.66■□□□□ 0.9
LIN9-201ENST00000328205 HFM1A2PYH4 1435 aa20.65■□□□□ 0.9
LIN9-201ENST00000328205 CDK13Q14004 1512 aaKnown RBP20.62■□□□□ 0.89
LIN9-201ENST00000328205 C11orf95C9JLR9 678 aaPredicted RBP20.62■□□□□ 0.89
LIN9-201ENST00000328205 SNAPC4Q5SXM2 1469 aa20.61■□□□□ 0.89
LIN9-201ENST00000328205 PRDM2Q13029 1718 aa20.59■□□□□ 0.89
LIN9-201ENST00000328205 NBPF8Q3BBV2 869 aa20.59■□□□□ 0.89
LIN9-201ENST00000328205 SALL2Q9Y467 1007 aaPredicted RBP20.58■□□□□ 0.89
LIN9-201ENST00000328205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.56■□□□□ 0.88
LIN9-201ENST00000328205 PKD2Q13563 968 aa20.55■□□□□ 0.88
LIN9-201ENST00000328205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.55■□□□□ 0.88
LIN9-201ENST00000328205 CFAP43Q8NDM7 1665 aa20.55■□□□□ 0.88
LIN9-201ENST00000328205 CUL7Q14999 1698 aa20.54■□□□□ 0.88
LIN9-201ENST00000328205 RGL3Q3MIN7 710 aa20.52■□□□□ 0.88
LIN9-201ENST00000328205 GRIN2BQ13224 1484 aa20.52■□□□□ 0.87
LIN9-201ENST00000328205 PLEKHD1A6NEE1 506 aa20.51■□□□□ 0.87
LIN9-201ENST00000328205 ZNF608Q9ULD9 1512 aaPredicted RBP20.51■□□□□ 0.87
LIN9-201ENST00000328205 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
LIN9-201ENST00000328205 PTPN23Q9H3S7 1636 aa20.5■□□□□ 0.87
LIN9-201ENST00000328205 EPRSP07814 1512 aaKnown RBP20.49■□□□□ 0.87
LIN9-201ENST00000328205 DEKP35659 375 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms