RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 NESP48681 1621 aa27.32■■□□□ 1.96
SPSB1-201ENST00000328089 FHOD3Q2V2M9 1422 aa27.3■■□□□ 1.96
SPSB1-201ENST00000328089 DDX10Q13206 875 aaKnown RBP27.28■■□□□ 1.96
SPSB1-201ENST00000328089 PHLDB1Q86UU1 1377 aa27.27■■□□□ 1.96
SPSB1-201ENST00000328089 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
SPSB1-201ENST00000328089 FANCD2Q9BXW9 1451 aa27.22■■□□□ 1.95
SPSB1-201ENST00000328089 RRBP1Q9P2E9 1410 aaKnown RBP27.21■■□□□ 1.95
SPSB1-201ENST00000328089 CHIC2Q9UKJ5 165 aa27.16■■□□□ 1.94
SPSB1-201ENST00000328089 CC2D2AQ9P2K1 1620 aa27.14■■□□□ 1.94
SPSB1-201ENST00000328089 BCANQ96GW7 911 aa27.14■■□□□ 1.93
SPSB1-201ENST00000328089 CLSPNQ9HAW4 1339 aa27.13■■□□□ 1.93
SPSB1-201ENST00000328089 SETD5Q9C0A6 1442 aa27.07■■□□□ 1.92
SPSB1-201ENST00000328089 LRRC9Q6ZRR7 1453 aa27.05■■□□□ 1.92
SPSB1-201ENST00000328089 RRP7BPQ9NSQ0 103 aa27.03■■□□□ 1.92
SPSB1-201ENST00000328089 MTUS2Q5JR59 1369 aa27.02■■□□□ 1.92
SPSB1-201ENST00000328089 POLA1P09884 1462 aaPredicted RBP26.99■■□□□ 1.91
SPSB1-201ENST00000328089 TRIM52Q96A61 297 aa26.98■■□□□ 1.91
SPSB1-201ENST00000328089 TIAM1Q13009 1591 aa26.97■■□□□ 1.91
SPSB1-201ENST00000328089 FHAD1B1AJZ9 1412 aa26.97■■□□□ 1.91
SPSB1-201ENST00000328089 CNGB1Q14028 1251 aaPredicted RBP26.96■■□□□ 1.91
SPSB1-201ENST00000328089 TOPBP1Q92547 1522 aa26.92■■□□□ 1.9
SPSB1-201ENST00000328089 SUPT16HQ9Y5B9 1047 aaKnown RBP26.91■■□□□ 1.9
SPSB1-201ENST00000328089 PCF11O94913 1555 aaKnown RBP26.9■■□□□ 1.9
SPSB1-201ENST00000328089 FOXD1Q16676 465 aa26.88■■□□□ 1.89
SPSB1-201ENST00000328089 MAPKBP1O60336 1514 aa26.87■■□□□ 1.89
SPSB1-201ENST00000328089 WDR97A6NE52 1622 aa26.83■■□□□ 1.89
SPSB1-201ENST00000328089 TONSLQ96HA7 1378 aa26.82■■□□□ 1.88
SPSB1-201ENST00000328089 PPP1R15AO75807 674 aaPredicted RBP26.8■■□□□ 1.88
SPSB1-201ENST00000328089 FBLN2P98095 1184 aa26.79■■□□□ 1.88
SPSB1-201ENST00000328089 FKBP8Q14318 412 aa26.75■■□□□ 1.87
SPSB1-201ENST00000328089 URB2Q14146 1524 aaKnown RBP26.74■■□□□ 1.87
SPSB1-201ENST00000328089 ABCA10Q8WWZ4 1543 aa26.73■■□□□ 1.87
SPSB1-201ENST00000328089 ANP32CO43423 234 aa26.73■■□□□ 1.87
SPSB1-201ENST00000328089 PTPRKQ15262 1439 aa26.72■■□□□ 1.87
SPSB1-201ENST00000328089 DNMBPQ6XZF7 1577 aa26.72■■□□□ 1.87
SPSB1-201ENST00000328089 CASKIN1Q8WXD9 1431 aa26.7■■□□□ 1.86
SPSB1-201ENST00000328089 GAPVD1Q14C86 1478 aa26.69■■□□□ 1.86
SPSB1-201ENST00000328089 FGD6Q6ZV73 1430 aa26.69■■□□□ 1.86
SPSB1-201ENST00000328089 AQRO60306 1485 aaKnown RBP eCLIP26.69■■□□□ 1.86
SPSB1-201ENST00000328089 FMN1Q68DA7 1419 aa26.67■■□□□ 1.86
SPSB1-201ENST00000328089 POLR3GLQ9BT43 218 aa26.66■■□□□ 1.86
SPSB1-201ENST00000328089 ZNF777Q9ULD5 760 aaPredicted RBP26.65■■□□□ 1.86
SPSB1-201ENST00000328089 SENP3-EIF4A1A0A087X0R7 540 aa26.63■■□□□ 1.85
SPSB1-201ENST00000328089 FYCO1Q9BQS8 1478 aa26.61■■□□□ 1.85
SPSB1-201ENST00000328089 IRX6P78412 446 aaPredicted RBP26.61■■□□□ 1.85
SPSB1-201ENST00000328089 ZNF326Q5BKZ1 582 aaKnown RBP26.6■■□□□ 1.85
SPSB1-201ENST00000328089 CCDC18Q5T9S5 1454 aa26.6■■□□□ 1.85
SPSB1-201ENST00000328089 ZNF644Q9H582 1327 aaPredicted RBP26.59■■□□□ 1.85
SPSB1-201ENST00000328089 PRDM2Q13029 1718 aa26.58■■□□□ 1.85
SPSB1-201ENST00000328089 PDS5BQ9NTI5 1447 aa26.57■■□□□ 1.84
SPSB1-201ENST00000328089 NCOA2Q15596 1464 aa26.57■■□□□ 1.84
SPSB1-201ENST00000328089 MAP3K1Q13233 1512 aa26.56■■□□□ 1.84
SPSB1-201ENST00000328089 MYT1Q01538 1121 aa26.54■■□□□ 1.84
SPSB1-201ENST00000328089 HNRNPUQ00839 825 aaKnown RBP eCLIP26.5■■□□□ 1.83
SPSB1-201ENST00000328089 NEFLP07196 543 aa26.5■■□□□ 1.83
SPSB1-201ENST00000328089 HSPA5P11021 654 aaKnown RBP26.48■■□□□ 1.83
SPSB1-201ENST00000328089 SNAPC4Q5SXM2 1469 aa26.48■■□□□ 1.83
SPSB1-201ENST00000328089 MYOM3Q5VTT5 1437 aa26.47■■□□□ 1.83
SPSB1-201ENST00000328089 NAIPQ13075 1403 aa26.46■■□□□ 1.83
SPSB1-201ENST00000328089 EFCAB5A4FU69 1503 aa26.45■■□□□ 1.82
SPSB1-201ENST00000328089 MPHOSPH9Q99550 1183 aa26.45■■□□□ 1.82
SPSB1-201ENST00000328089 L3MBTL2Q969R5 705 aa26.44■■□□□ 1.82
SPSB1-201ENST00000328089 CFAP43Q8NDM7 1665 aa26.43■■□□□ 1.82
SPSB1-201ENST00000328089 CDK13Q14004 1512 aaKnown RBP26.43■■□□□ 1.82
SPSB1-201ENST00000328089 TSHZ2Q9NRE2 1034 aa26.43■■□□□ 1.82
SPSB1-201ENST00000328089 FAM9BQ8IZU0 186 aa26.41■■□□□ 1.82
SPSB1-201ENST00000328089 SLC4A1APQ9BWU0 796 aaKnown RBP26.41■■□□□ 1.82
SPSB1-201ENST00000328089 TIMELESSQ9UNS1 1208 aa26.4■■□□□ 1.82
SPSB1-201ENST00000328089 HFM1A2PYH4 1435 aa26.39■■□□□ 1.82
SPSB1-201ENST00000328089 UACAQ9BZF9 1416 aa26.39■■□□□ 1.82
SPSB1-201ENST00000328089 CCDC184Q52MB2 194 aa26.37■■□□□ 1.81
SPSB1-201ENST00000328089 CHMP7Q8WUX9 453 aaPredicted RBP26.36■■□□□ 1.81
SPSB1-201ENST00000328089 CUL7Q14999 1698 aa26.36■■□□□ 1.81
SPSB1-201ENST00000328089 MAGI3Q5TCQ9 1506 aa26.35■■□□□ 1.81
SPSB1-201ENST00000328089 ZNF608Q9ULD9 1512 aaPredicted RBP26.33■■□□□ 1.81
SPSB1-201ENST00000328089 EIF4G2P78344 907 aaKnown RBP eCLIP26.33■■□□□ 1.81
SPSB1-201ENST00000328089 WASHC2AQ641Q2 1341 aa26.33■■□□□ 1.81
SPSB1-201ENST00000328089 C11orf95C9JLR9 678 aaPredicted RBP26.33■■□□□ 1.81
SPSB1-201ENST00000328089 GRIN2BQ13224 1484 aa26.32■■□□□ 1.8
SPSB1-201ENST00000328089 CTTNBP2Q8WZ74 1663 aa26.32■■□□□ 1.8
SPSB1-201ENST00000328089 LAMC3Q9Y6N6 1575 aa26.31■■□□□ 1.8
SPSB1-201ENST00000328089 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
SPSB1-201ENST00000328089 CFDP1Q9UEE9 299 aaPredicted RBP26.28■■□□□ 1.8
SPSB1-201ENST00000328089 PTPN23Q9H3S7 1636 aa26.27■■□□□ 1.8
SPSB1-201ENST00000328089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.26■■□□□ 1.79
SPSB1-201ENST00000328089 NBPF8Q3BBV2 869 aa26.25■■□□□ 1.79
SPSB1-201ENST00000328089 CCER2I3L3R5 266 aa26.24■■□□□ 1.79
SPSB1-201ENST00000328089 KDM2AQ9Y2K7 1162 aa26.23■■□□□ 1.79
SPSB1-201ENST00000328089 EPRSP07814 1512 aaKnown RBP26.22■■□□□ 1.79
SPSB1-201ENST00000328089 ABCA5Q8WWZ7 1642 aa26.22■■□□□ 1.79
SPSB1-201ENST00000328089 LRRIQ1Q96JM4 1722 aa26.21■■□□□ 1.79
SPSB1-201ENST00000328089 MRS2Q9HD23 443 aa26.2■■□□□ 1.78
SPSB1-201ENST00000328089 CDK11AQ9UQ88 783 aaPredicted RBP26.19■■□□□ 1.78
SPSB1-201ENST00000328089 KDM6BO15054 1643 aa26.18■■□□□ 1.78
SPSB1-201ENST00000328089 THOC2Q8NI27 1593 aaKnown RBP26.17■■□□□ 1.78
SPSB1-201ENST00000328089 SUPT6HQ7KZ85 1726 aaKnown RBP26.17■■□□□ 1.78
SPSB1-201ENST00000328089 EHBP1L1Q8N3D4 1523 aa26.16■■□□□ 1.78
SPSB1-201ENST00000328089 SAMD9Q5K651 1589 aa26.15■■□□□ 1.78
SPSB1-201ENST00000328089 PRG4Q92954 1404 aaPredicted RBP26.15■■□□□ 1.78
SPSB1-201ENST00000328089 UGGT2Q9NYU1 1516 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms