RNA–Protein interactions for RNA: ENST00000320159.2

ZNF48-201, Transcript of zinc finger protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF48, Length 3,234 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-201ENST00000320159 PHLDB1Q86UU1 1377 aa29.95■■■□□ 2.39
ZNF48-201ENST00000320159 NESP48681 1621 aa29.95■■■□□ 2.38
ZNF48-201ENST00000320159 FHOD3Q2V2M9 1422 aa29.94■■■□□ 2.38
ZNF48-201ENST00000320159 DDX10Q13206 875 aaKnown RBP29.94■■■□□ 2.38
ZNF48-201ENST00000320159 RRBP1Q9P2E9 1410 aaKnown RBP29.92■■■□□ 2.38
ZNF48-201ENST00000320159 BCANQ96GW7 911 aa29.84■■■□□ 2.37
ZNF48-201ENST00000320159 TDRD9Q8NDG6 1382 aaKnown RBP29.79■■■□□ 2.36
ZNF48-201ENST00000320159 FANCD2Q9BXW9 1451 aa29.79■■■□□ 2.36
ZNF48-201ENST00000320159 CC2D2AQ9P2K1 1620 aa29.75■■■□□ 2.35
ZNF48-201ENST00000320159 CLSPNQ9HAW4 1339 aa29.74■■■□□ 2.35
ZNF48-201ENST00000320159 CHIC2Q9UKJ5 165 aa29.71■■■□□ 2.35
ZNF48-201ENST00000320159 LRRC9Q6ZRR7 1453 aa29.71■■■□□ 2.35
ZNF48-201ENST00000320159 SETD5Q9C0A6 1442 aa29.7■■■□□ 2.34
ZNF48-201ENST00000320159 TIAM1Q13009 1591 aa29.68■■■□□ 2.34
ZNF48-201ENST00000320159 SUPT16HQ9Y5B9 1047 aaKnown RBP29.66■■■□□ 2.34
ZNF48-201ENST00000320159 MAPKBP1O60336 1514 aa29.64■■■□□ 2.34
ZNF48-201ENST00000320159 TRIM52Q96A61 297 aa29.62■■■□□ 2.33
ZNF48-201ENST00000320159 PCF11O94913 1555 aaKnown RBP29.62■■■□□ 2.33
ZNF48-201ENST00000320159 POLA1P09884 1462 aaPredicted RBP29.59■■■□□ 2.33
ZNF48-201ENST00000320159 WDR97A6NE52 1622 aa29.59■■■□□ 2.33
ZNF48-201ENST00000320159 RRP7BPQ9NSQ0 103 aa29.58■■■□□ 2.33
ZNF48-201ENST00000320159 MTUS2Q5JR59 1369 aa29.54■■■□□ 2.32
ZNF48-201ENST00000320159 CNGB1Q14028 1251 aaPredicted RBP29.51■■■□□ 2.32
ZNF48-201ENST00000320159 TOPBP1Q92547 1522 aa29.51■■■□□ 2.31
ZNF48-201ENST00000320159 FHAD1B1AJZ9 1412 aa29.5■■■□□ 2.31
ZNF48-201ENST00000320159 FOXD1Q16676 465 aa29.47■■■□□ 2.31
ZNF48-201ENST00000320159 FKBP8Q14318 412 aa29.4■■■□□ 2.3
ZNF48-201ENST00000320159 PPP1R15AO75807 674 aaPredicted RBP29.4■■■□□ 2.3
ZNF48-201ENST00000320159 PTPRKQ15262 1439 aa29.39■■■□□ 2.3
ZNF48-201ENST00000320159 TONSLQ96HA7 1378 aa29.36■■■□□ 2.29
ZNF48-201ENST00000320159 PRDM2Q13029 1718 aa29.35■■■□□ 2.29
ZNF48-201ENST00000320159 URB2Q14146 1524 aaKnown RBP29.34■■■□□ 2.29
ZNF48-201ENST00000320159 ABCA10Q8WWZ4 1543 aa29.31■■■□□ 2.28
ZNF48-201ENST00000320159 DNMBPQ6XZF7 1577 aa29.31■■■□□ 2.28
ZNF48-201ENST00000320159 FGD6Q6ZV73 1430 aa29.29■■■□□ 2.28
ZNF48-201ENST00000320159 CASKIN1Q8WXD9 1431 aa29.28■■■□□ 2.28
ZNF48-201ENST00000320159 ANP32CO43423 234 aa29.27■■■□□ 2.28
ZNF48-201ENST00000320159 SENP3-EIF4A1A0A087X0R7 540 aa29.27■■■□□ 2.28
ZNF48-201ENST00000320159 IRX6P78412 446 aaPredicted RBP29.26■■■□□ 2.28
ZNF48-201ENST00000320159 AQRO60306 1485 aaKnown RBP eCLIP29.23■■■□□ 2.27
ZNF48-201ENST00000320159 CCDC18Q5T9S5 1454 aa29.22■■■□□ 2.27
ZNF48-201ENST00000320159 FYCO1Q9BQS8 1478 aa29.22■■■□□ 2.27
ZNF48-201ENST00000320159 GAPVD1Q14C86 1478 aa29.21■■■□□ 2.27
ZNF48-201ENST00000320159 FMN1Q68DA7 1419 aa29.19■■■□□ 2.26
ZNF48-201ENST00000320159 MAP3K1Q13233 1512 aa29.18■■■□□ 2.26
ZNF48-201ENST00000320159 CFAP43Q8NDM7 1665 aa29.17■■■□□ 2.26
ZNF48-201ENST00000320159 TSHZ2Q9NRE2 1034 aa29.17■■■□□ 2.26
ZNF48-201ENST00000320159 NCOA2Q15596 1464 aa29.16■■■□□ 2.26
ZNF48-201ENST00000320159 FBLN2P98095 1184 aa29.15■■■□□ 2.26
ZNF48-201ENST00000320159 POLR3GLQ9BT43 218 aa29.14■■■□□ 2.25
ZNF48-201ENST00000320159 ZNF644Q9H582 1327 aaPredicted RBP29.13■■■□□ 2.25
ZNF48-201ENST00000320159 SNAPC4Q5SXM2 1469 aa29.12■■■□□ 2.25
ZNF48-201ENST00000320159 ZNF777Q9ULD5 760 aaPredicted RBP29.08■■■□□ 2.25
ZNF48-201ENST00000320159 ZNF326Q5BKZ1 582 aaKnown RBP29.07■■■□□ 2.24
ZNF48-201ENST00000320159 HNRNPUQ00839 825 aaKnown RBP eCLIP29.07■■■□□ 2.24
ZNF48-201ENST00000320159 NAIPQ13075 1403 aa29.06■■■□□ 2.24
ZNF48-201ENST00000320159 HSPA5P11021 654 aaKnown RBP29.05■■■□□ 2.24
ZNF48-201ENST00000320159 MYOM3Q5VTT5 1437 aa29.03■■■□□ 2.24
ZNF48-201ENST00000320159 CCDC184Q52MB2 194 aa29.03■■■□□ 2.24
ZNF48-201ENST00000320159 CTTNBP2Q8WZ74 1663 aa29.03■■■□□ 2.24
ZNF48-201ENST00000320159 CDK13Q14004 1512 aaKnown RBP29.03■■■□□ 2.24
ZNF48-201ENST00000320159 EFCAB5A4FU69 1503 aa29.02■■■□□ 2.24
ZNF48-201ENST00000320159 MAGI3Q5TCQ9 1506 aa29.02■■■□□ 2.24
ZNF48-201ENST00000320159 PDS5BQ9NTI5 1447 aa29.02■■■□□ 2.24
ZNF48-201ENST00000320159 LRRIQ1Q96JM4 1722 aa29.01■■■□□ 2.24
ZNF48-201ENST00000320159 NEFLP07196 543 aa29■■■□□ 2.23
ZNF48-201ENST00000320159 L3MBTL2Q969R5 705 aa28.98■■■□□ 2.23
ZNF48-201ENST00000320159 HFM1A2PYH4 1435 aa28.97■■■□□ 2.23
ZNF48-201ENST00000320159 UACAQ9BZF9 1416 aa28.97■■■□□ 2.23
ZNF48-201ENST00000320159 CUL7Q14999 1698 aa28.97■■■□□ 2.23
ZNF48-201ENST00000320159 MPHOSPH9Q99550 1183 aa28.96■■■□□ 2.23
ZNF48-201ENST00000320159 C11orf95C9JLR9 678 aaPredicted RBP28.96■■■□□ 2.23
ZNF48-201ENST00000320159 FAM9BQ8IZU0 186 aa28.95■■■□□ 2.22
ZNF48-201ENST00000320159 PTPN23Q9H3S7 1636 aa28.94■■■□□ 2.22
ZNF48-201ENST00000320159 WASHC2AQ641Q2 1341 aa28.93■■■□□ 2.22
ZNF48-201ENST00000320159 GRIN2BQ13224 1484 aa28.93■■■□□ 2.22
ZNF48-201ENST00000320159 KIF21AQ7Z4S6 1674 aa28.92■■■□□ 2.22
ZNF48-201ENST00000320159 TIMELESSQ9UNS1 1208 aa28.9■■■□□ 2.22
ZNF48-201ENST00000320159 KDM6BO15054 1643 aa28.89■■■□□ 2.22
ZNF48-201ENST00000320159 ZNF608Q9ULD9 1512 aaPredicted RBP28.86■■■□□ 2.21
ZNF48-201ENST00000320159 SLC4A1APQ9BWU0 796 aaKnown RBP28.86■■■□□ 2.21
ZNF48-201ENST00000320159 LAMC3Q9Y6N6 1575 aa28.85■■■□□ 2.21
ZNF48-201ENST00000320159 ABCA5Q8WWZ7 1642 aa28.84■■■□□ 2.21
ZNF48-201ENST00000320159 NBPF8Q3BBV2 869 aa28.84■■■□□ 2.21
ZNF48-201ENST00000320159 EIF4G2P78344 907 aaKnown RBP eCLIP28.82■■■□□ 2.2
ZNF48-201ENST00000320159 CCER2I3L3R5 266 aa28.8■■■□□ 2.2
ZNF48-201ENST00000320159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.8■■■□□ 2.2
ZNF48-201ENST00000320159 SAMD9Q5K651 1589 aa28.79■■■□□ 2.2
ZNF48-201ENST00000320159 SUPT6HQ7KZ85 1726 aaKnown RBP28.78■■■□□ 2.2
ZNF48-201ENST00000320159 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
ZNF48-201ENST00000320159 EPRSP07814 1512 aaKnown RBP28.77■■■□□ 2.2
ZNF48-201ENST00000320159 DENND4BO75064 1496 aaPredicted RBP28.76■■■□□ 2.19
ZNF48-201ENST00000320159 UGGT2Q9NYU1 1516 aa28.73■■■□□ 2.19
ZNF48-201ENST00000320159 EHBP1L1Q8N3D4 1523 aa28.72■■■□□ 2.19
ZNF48-201ENST00000320159 MRS2Q9HD23 443 aa28.7■■■□□ 2.19
ZNF48-201ENST00000320159 CHMP7Q8WUX9 453 aaPredicted RBP28.7■■■□□ 2.18
ZNF48-201ENST00000320159 CFDP1Q9UEE9 299 aaPredicted RBP28.68■■■□□ 2.18
ZNF48-201ENST00000320159 KDM2AQ9Y2K7 1162 aa28.67■■■□□ 2.18
ZNF48-201ENST00000320159 TARBP1Q13395 1621 aaKnown RBP28.66■■■□□ 2.18
ZNF48-201ENST00000320159 KDM5BQ9UGL1 1544 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms