RNA–Protein interactions for RNA: ENST00000307089.7

NSUN4-201, Transcript of NOP2/Sun RNA methyltransferase family member 4, humanhuman

TSL 1 (best)

Gene NSUN4, Length 4,344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN4-201ENST00000307089 IGF1RP08069 1367 aa12.91□□□□□ -0.34
NSUN4-201ENST00000307089 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
NSUN4-201ENST00000307089 PRDM2Q13029 1718 aa12.89□□□□□ -0.35
NSUN4-201ENST00000307089 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
NSUN4-201ENST00000307089 FAM50AQ14320 339 aaKnown RBP12.89□□□□□ -0.35
NSUN4-201ENST00000307089 CARMIL1Q5VZK9 1371 aa12.89□□□□□ -0.35
NSUN4-201ENST00000307089 PHLDB1Q86UU1 1377 aa12.88□□□□□ -0.35
NSUN4-201ENST00000307089 FHAD1B1AJZ9 1412 aa12.88□□□□□ -0.35
NSUN4-201ENST00000307089 TIMELESSQ9UNS1 1208 aa12.88□□□□□ -0.35
NSUN4-201ENST00000307089 SIN3AQ96ST3 1273 aa12.87□□□□□ -0.35
NSUN4-201ENST00000307089 CFAP43Q8NDM7 1665 aa12.85□□□□□ -0.35
NSUN4-201ENST00000307089 FKBP8Q14318 412 aa12.85□□□□□ -0.35
NSUN4-201ENST00000307089 BCANQ96GW7 911 aa12.85□□□□□ -0.35
NSUN4-201ENST00000307089 ANP32EQ9BTT0 268 aa12.85□□□□□ -0.35
NSUN4-201ENST00000307089 PPP1R15AO75807 674 aaPredicted RBP12.84□□□□□ -0.35
NSUN4-201ENST00000307089 NEFLP07196 543 aa12.83□□□□□ -0.36
NSUN4-201ENST00000307089 PCF11O94913 1555 aaKnown RBP12.82□□□□□ -0.36
NSUN4-201ENST00000307089 CCER2I3L3R5 266 aa12.82□□□□□ -0.36
NSUN4-201ENST00000307089 FGD5Q6ZNL6 1462 aa12.82□□□□□ -0.36
NSUN4-201ENST00000307089 ATP1B4Q9UN42 357 aaPredicted RBP12.81□□□□□ -0.36
NSUN4-201ENST00000307089 ANP32CO43423 234 aa12.81□□□□□ -0.36
NSUN4-201ENST00000307089 P3H3Q8IVL6 736 aa12.79□□□□□ -0.36
NSUN4-201ENST00000307089 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
NSUN4-201ENST00000307089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.78□□□□□ -0.36
NSUN4-201ENST00000307089 FYCO1Q9BQS8 1478 aa12.77□□□□□ -0.37
NSUN4-201ENST00000307089 HIRIP3Q9BW71 556 aaPredicted RBP12.76□□□□□ -0.37
NSUN4-201ENST00000307089 FHOD3Q2V2M9 1422 aa12.75□□□□□ -0.37
NSUN4-201ENST00000307089 TRIM52Q96A61 297 aa12.75□□□□□ -0.37
NSUN4-201ENST00000307089 TONSLQ96HA7 1378 aa12.75□□□□□ -0.37
NSUN4-201ENST00000307089 CASKIN1Q8WXD9 1431 aa12.75□□□□□ -0.37
NSUN4-201ENST00000307089 EFCAB5A4FU69 1503 aa12.75□□□□□ -0.37
NSUN4-201ENST00000307089 AQRO60306 1485 aaKnown RBP eCLIP12.73□□□□□ -0.371e-7■■■□□ 14.7
NSUN4-201ENST00000307089 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.38
NSUN4-201ENST00000307089 CCDC18Q5T9S5 1454 aa12.7□□□□□ -0.38
NSUN4-201ENST00000307089 RBM19Q9Y4C8 960 aaKnown RBP12.7□□□□□ -0.38
NSUN4-201ENST00000307089 FMN1Q68DA7 1419 aa12.68□□□□□ -0.38
NSUN4-201ENST00000307089 UACAQ9BZF9 1416 aa12.68□□□□□ -0.38
NSUN4-201ENST00000307089 HFM1A2PYH4 1435 aa12.67□□□□□ -0.38
NSUN4-201ENST00000307089 CTTNBP2Q8WZ74 1663 aa12.67□□□□□ -0.38
NSUN4-201ENST00000307089 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
NSUN4-201ENST00000307089 FANCD2Q9BXW9 1451 aa12.67□□□□□ -0.38
NSUN4-201ENST00000307089 ABCA10Q8WWZ4 1543 aa12.67□□□□□ -0.38
NSUN4-201ENST00000307089 MTUS2Q5JR59 1369 aa12.66□□□□□ -0.38
NSUN4-201ENST00000307089 CUL7Q14999 1698 aa12.66□□□□□ -0.38
NSUN4-201ENST00000307089 PTPN23Q9H3S7 1636 aa12.65□□□□□ -0.38
NSUN4-201ENST00000307089 DNMBPQ6XZF7 1577 aa12.65□□□□□ -0.38
NSUN4-201ENST00000307089 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
NSUN4-201ENST00000307089 SNAPC4Q5SXM2 1469 aa12.63□□□□□ -0.39
NSUN4-201ENST00000307089 PTPRKQ15262 1439 aa12.63□□□□□ -0.39
NSUN4-201ENST00000307089 POLA1P09884 1462 aaPredicted RBP12.62□□□□□ -0.39
NSUN4-201ENST00000307089 HNRNPUQ00839 825 aaKnown RBP eCLIP12.61□□□□□ -0.39
NSUN4-201ENST00000307089 NAIPQ13075 1403 aa12.61□□□□□ -0.39
NSUN4-201ENST00000307089 MYOM3Q5VTT5 1437 aa12.61□□□□□ -0.39
NSUN4-201ENST00000307089 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
NSUN4-201ENST00000307089 NCOA2Q15596 1464 aa12.6□□□□□ -0.39
NSUN4-201ENST00000307089 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
NSUN4-201ENST00000307089 SUPT6HQ7KZ85 1726 aaKnown RBP12.58□□□□□ -0.4
NSUN4-201ENST00000307089 KDM5BQ9UGL1 1544 aa12.57□□□□□ -0.4
NSUN4-201ENST00000307089 CDK11AQ9UQ88 783 aaPredicted RBP12.57□□□□□ -0.4
NSUN4-201ENST00000307089 EHBP1L1Q8N3D4 1523 aa12.57□□□□□ -0.4
NSUN4-201ENST00000307089 SAMD9Q5K651 1589 aa12.56□□□□□ -0.4
NSUN4-201ENST00000307089 THOC2Q8NI27 1593 aaKnown RBP12.56□□□□□ -0.4
NSUN4-201ENST00000307089 GRIN2BQ13224 1484 aa12.56□□□□□ -0.4
NSUN4-201ENST00000307089 LRRIQ1Q96JM4 1722 aa12.55□□□□□ -0.4
NSUN4-201ENST00000307089 HSPA5P11021 654 aaKnown RBP12.55□□□□□ -0.4
NSUN4-201ENST00000307089 BCL11AQ9H165 835 aa12.54□□□□□ -0.4
NSUN4-201ENST00000307089 WASHC2AQ641Q2 1341 aa12.54□□□□□ -0.4
NSUN4-201ENST00000307089 ERICH6BQ5W0A0 696 aa12.53□□□□□ -0.4
NSUN4-201ENST00000307089 EIF4G2P78344 907 aaKnown RBP eCLIP12.53□□□□□ -0.4
NSUN4-201ENST00000307089 IRX6P78412 446 aaPredicted RBP12.53□□□□□ -0.4
NSUN4-201ENST00000307089 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
NSUN4-201ENST00000307089 UGGT2Q9NYU1 1516 aa12.52□□□□□ -0.41
NSUN4-201ENST00000307089 RRP7BPQ9NSQ0 103 aa12.52□□□□□ -0.41
NSUN4-201ENST00000307089 HECW1Q76N89 1606 aa12.51□□□□□ -0.41
NSUN4-201ENST00000307089 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
NSUN4-201ENST00000307089 MSH5O43196 834 aa12.51□□□□□ -0.41
NSUN4-201ENST00000307089 CNTLNQ9NXG0 1405 aa12.51□□□□□ -0.41
NSUN4-201ENST00000307089 CHIC2Q9UKJ5 165 aa12.5□□□□□ -0.41
NSUN4-201ENST00000307089 ARHGEF11O15085 1522 aa12.5□□□□□ -0.41
NSUN4-201ENST00000307089 ERICH6Q7L0X2 663 aa12.49□□□□□ -0.41
NSUN4-201ENST00000307089 KIF21AQ7Z4S6 1674 aa12.49□□□□□ -0.41
NSUN4-201ENST00000307089 TCOF1Q13428 1488 aaKnown RBP12.49□□□□□ -0.41
NSUN4-201ENST00000307089 PPP4R2Q9NY27 417 aa12.49□□□□□ -0.41
NSUN4-201ENST00000307089 NESP48681 1621 aa12.48□□□□□ -0.41
NSUN4-201ENST00000307089 AKNAQ7Z591 1439 aa12.48□□□□□ -0.41
NSUN4-201ENST00000307089 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
NSUN4-201ENST00000307089 GAPVD1Q14C86 1478 aa12.47□□□□□ -0.41
NSUN4-201ENST00000307089 TDRD9Q8NDG6 1382 aaKnown RBP12.47□□□□□ -0.41
NSUN4-201ENST00000307089 DENND4BO75064 1496 aaPredicted RBP12.46□□□□□ -0.41
NSUN4-201ENST00000307089 MAGI3Q5TCQ9 1506 aa12.46□□□□□ -0.41
NSUN4-201ENST00000307089 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.42
NSUN4-201ENST00000307089 MPHOSPH9Q99550 1183 aa12.46□□□□□ -0.42
NSUN4-201ENST00000307089 L3MBTL2Q969R5 705 aa12.45□□□□□ -0.42
NSUN4-201ENST00000307089 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
NSUN4-201ENST00000307089 CCDC7Q96M83 1385 aa12.45□□□□□ -0.42
NSUN4-201ENST00000307089 NCOA1Q15788 1441 aa12.44□□□□□ -0.42
NSUN4-201ENST00000307089 CCDC184Q52MB2 194 aa12.44□□□□□ -0.42
NSUN4-201ENST00000307089 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
NSUN4-201ENST00000307089 MRS2Q9HD23 443 aa12.43□□□□□ -0.42
NSUN4-201ENST00000307089 KDM6BO15054 1643 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms