RNA–Protein interactions for RNA: ENST00000307089.7

NSUN4-201, Transcript of NOP2/Sun RNA methyltransferase family member 4, humanhuman

TSL 1 (best)

Gene NSUN4, Length 4,344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN4-201ENST00000307089 NISCHQ9Y2I1 1504 aa18.07■□□□□ 0.48
NSUN4-201ENST00000307089 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
NSUN4-201ENST00000307089 SUPT5HO00267 1087 aaKnown RBP15.42■□□□□ 0.06
NSUN4-201ENST00000307089 ZCCHC6Q5VYS8 1495 aaKnown RBP15.34■□□□□ 0.05
NSUN4-201ENST00000307089 CCDC180Q9P1Z9 1646 aa15.26■□□□□ 0.03
NSUN4-201ENST00000307089 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
NSUN4-201ENST00000307089 MYO15BQ96JP2 1530 aa15.08■□□□□ 0
NSUN4-201ENST00000307089 HRCP23327 699 aa15.07■□□□□ 0
NSUN4-201ENST00000307089 DCAF8L2P0C7V8 631 aa14.96□□□□□ -0.02
NSUN4-201ENST00000307089 PCGF6Q9BYE7 350 aa14.9□□□□□ -0.02
NSUN4-201ENST00000307089 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.04
NSUN4-201ENST00000307089 PPARGC1BQ86YN6 1023 aaKnown RBP14.68□□□□□ -0.06
NSUN4-201ENST00000307089 LOC105371045A0A1W2PR82 267 aa14.65□□□□□ -0.06
NSUN4-201ENST00000307089 TRIM26Q12899 539 aaPredicted RBP14.57□□□□□ -0.08
NSUN4-201ENST00000307089 ABCC9O60706 1549 aa14.52□□□□□ -0.08
NSUN4-201ENST00000307089 ZEB1P37275 1124 aaPredicted RBP14.4□□□□□ -0.1
NSUN4-201ENST00000307089 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
NSUN4-201ENST00000307089 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
NSUN4-201ENST00000307089 SCRIBQ14160 1630 aa14.35□□□□□ -0.11
NSUN4-201ENST00000307089 RB1CC1Q8TDY2 1594 aa14.29□□□□□ -0.12
NSUN4-201ENST00000307089 AEBP2Q6ZN18 517 aaPredicted RBP14.29□□□□□ -0.12
NSUN4-201ENST00000307089 FAM9AQ8IZU1 332 aaPredicted RBP14.24□□□□□ -0.13
NSUN4-201ENST00000307089 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
NSUN4-201ENST00000307089 PELP1Q8IZL8 1130 aaKnown RBP14.11□□□□□ -0.15
NSUN4-201ENST00000307089 CECR2Q9BXF3 1484 aa14.07□□□□□ -0.16
NSUN4-201ENST00000307089 NACADO15069 1562 aa14.06□□□□□ -0.16
NSUN4-201ENST00000307089 MROH2BQ7Z745 1585 aa14.06□□□□□ -0.16
NSUN4-201ENST00000307089 SCAF1Q9H7N4 1312 aaKnown RBP14.02□□□□□ -0.17
NSUN4-201ENST00000307089 WIZO95785 1651 aa14□□□□□ -0.17
NSUN4-201ENST00000307089 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
NSUN4-201ENST00000307089 CCER1Q8TC90 406 aaPredicted RBP13.93□□□□□ -0.18
NSUN4-201ENST00000307089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.92□□□□□ -0.18
NSUN4-201ENST00000307089 EIF4G1Q04637 1599 aaKnown RBP13.9□□□□□ -0.18
NSUN4-201ENST00000307089 ACIN1Q9UKV3 1341 aaKnown RBP13.84□□□□□ -0.19
NSUN4-201ENST00000307089 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.2
NSUN4-201ENST00000307089 TOP2AP11388 1531 aaKnown RBP13.79□□□□□ -0.2
NSUN4-201ENST00000307089 DIEXFQ68CQ4 756 aaKnown RBP13.79□□□□□ -0.2
NSUN4-201ENST00000307089 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
NSUN4-201ENST00000307089 CEP162Q5TB80 1403 aa13.77□□□□□ -0.2
NSUN4-201ENST00000307089 NEUROD1Q13562 356 aa13.77□□□□□ -0.21
NSUN4-201ENST00000307089 CCDC88BA6NC98 1476 aa13.77□□□□□ -0.21
NSUN4-201ENST00000307089 CENPBP07199 599 aaPredicted RBP13.77□□□□□ -0.21
NSUN4-201ENST00000307089 TNIKQ9UKE5 1360 aa13.74□□□□□ -0.21
NSUN4-201ENST00000307089 TTBK1Q5TCY1 1321 aaPredicted RBP13.73□□□□□ -0.21
NSUN4-201ENST00000307089 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
NSUN4-201ENST00000307089 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
NSUN4-201ENST00000307089 EEA1Q15075 1411 aa13.71□□□□□ -0.22
NSUN4-201ENST00000307089 SOGA1O94964 1423 aa13.69□□□□□ -0.22
NSUN4-201ENST00000307089 GTF3C3Q9Y5Q9 886 aa13.68□□□□□ -0.22
NSUN4-201ENST00000307089 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
NSUN4-201ENST00000307089 UBTFP17480 764 aaKnown RBP13.66□□□□□ -0.22
NSUN4-201ENST00000307089 ZNF316A6NFI3 1004 aaPredicted RBP13.63□□□□□ -0.23
NSUN4-201ENST00000307089 GOLGA3Q08378 1498 aa13.62□□□□□ -0.23
NSUN4-201ENST00000307089 RUSC2Q8N2Y8 1516 aa13.6□□□□□ -0.23
NSUN4-201ENST00000307089 UNC13AQ9UPW8 1703 aa13.56□□□□□ -0.24
NSUN4-201ENST00000307089 CEP164Q9UPV0 1460 aa13.52□□□□□ -0.25
NSUN4-201ENST00000307089 KIF21BO75037 1637 aa13.49□□□□□ -0.25
NSUN4-201ENST00000307089 MYT1Q01538 1121 aa13.49□□□□□ -0.25
NSUN4-201ENST00000307089 HNRNPUL2Q1KMD3 747 aaKnown RBP13.49□□□□□ -0.25
NSUN4-201ENST00000307089 YTHDC1Q96MU7 727 aaKnown RBP13.48□□□□□ -0.25
NSUN4-201ENST00000307089 CLIP1P30622 1438 aa13.47□□□□□ -0.25
NSUN4-201ENST00000307089 APLP2Q06481 763 aa13.44□□□□□ -0.26
NSUN4-201ENST00000307089 SYNJ1O43426 1573 aa13.44□□□□□ -0.26
NSUN4-201ENST00000307089 VPS8Q8N3P4 1428 aa13.44□□□□□ -0.26
NSUN4-201ENST00000307089 MIER1Q8N108 512 aa13.44□□□□□ -0.26
NSUN4-201ENST00000307089 PEG3Q9GZU2 1588 aa13.43□□□□□ -0.26
NSUN4-201ENST00000307089 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
NSUN4-201ENST00000307089 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
NSUN4-201ENST00000307089 BICRAQ9NZM4 1560 aa13.37□□□□□ -0.27
NSUN4-201ENST00000307089 RAPGEF2Q9Y4G8 1499 aa13.36□□□□□ -0.27
NSUN4-201ENST00000307089 RANGAP1P46060 587 aaPredicted RBP13.31□□□□□ -0.28
NSUN4-201ENST00000307089 CLSPNQ9HAW4 1339 aa13.31□□□□□ -0.28
NSUN4-201ENST00000307089 ATAD2BQ9ULI0 1458 aa13.3□□□□□ -0.28
NSUN4-201ENST00000307089 TOP2BQ02880 1626 aa13.27□□□□□ -0.29
NSUN4-201ENST00000307089 DHX57Q6P158 1386 aaKnown RBP13.24□□□□□ -0.29
NSUN4-201ENST00000307089 ERICH3Q5RHP9 1530 aa13.24□□□□□ -0.29
NSUN4-201ENST00000307089 BIVM-ERCC5R4GMW8 1640 aa13.21□□□□□ -0.29
NSUN4-201ENST00000307089 ARAP1Q96P48 1450 aa13.21□□□□□ -0.3
NSUN4-201ENST00000307089 PRXQ9BXM0 1461 aa13.19□□□□□ -0.3
NSUN4-201ENST00000307089 PHF23Q9BUL5 403 aaPredicted RBP13.17□□□□□ -0.3
NSUN4-201ENST00000307089 KANK4Q5T7N3 995 aaPredicted RBP13.16□□□□□ -0.3
NSUN4-201ENST00000307089 RRBP1Q9P2E9 1410 aaKnown RBP13.16□□□□□ -0.3
NSUN4-201ENST00000307089 CUX2O14529 1486 aa13.12□□□□□ -0.31
NSUN4-201ENST00000307089 SUPT16HQ9Y5B9 1047 aaKnown RBP13.12□□□□□ -0.31
NSUN4-201ENST00000307089 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
NSUN4-201ENST00000307089 CCNB3Q8WWL7 1395 aa13.1□□□□□ -0.31
NSUN4-201ENST00000307089 CUX1P39880 1505 aa13.08□□□□□ -0.32
NSUN4-201ENST00000307089 ARHGAP35Q9NRY4 1499 aa13.05□□□□□ -0.32
NSUN4-201ENST00000307089 ITGAEP38570 1179 aa13.04□□□□□ -0.32
NSUN4-201ENST00000307089 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
NSUN4-201ENST00000307089 RAB3GAP2Q9H2M9 1393 aa13.01□□□□□ -0.33
NSUN4-201ENST00000307089 NCAPD3P42695 1498 aa13□□□□□ -0.33
NSUN4-201ENST00000307089 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
NSUN4-201ENST00000307089 MAP3K1Q13233 1512 aa12.97□□□□□ -0.33
NSUN4-201ENST00000307089 CFTRP13569 1480 aa12.97□□□□□ -0.33
NSUN4-201ENST00000307089 TIAM1Q13009 1591 aa12.97□□□□□ -0.33
NSUN4-201ENST00000307089 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
NSUN4-201ENST00000307089 SETD5Q9C0A6 1442 aa12.96□□□□□ -0.33
NSUN4-201ENST00000307089 KCNH8Q96L42 1107 aa12.93□□□□□ -0.34
NSUN4-201ENST00000307089 LRRC9Q6ZRR7 1453 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms