RNA–Protein interactions for RNA: ENST00000301671.12

GHDC-201, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GHDC, Length 2,650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-201ENST00000301671 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
GHDC-201ENST00000301671 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
GHDC-201ENST00000301671 SETD5Q9C0A6 1442 aa22.92■■□□□ 1.26
GHDC-201ENST00000301671 TIAM1Q13009 1591 aa22.92■■□□□ 1.26
GHDC-201ENST00000301671 BCANQ96GW7 911 aa22.9■■□□□ 1.26
GHDC-201ENST00000301671 LRRC9Q6ZRR7 1453 aa22.88■■□□□ 1.25
GHDC-201ENST00000301671 WDR97A6NE52 1622 aa22.86■■□□□ 1.25
GHDC-201ENST00000301671 TSHZ2Q9NRE2 1034 aa22.85■■□□□ 1.25
GHDC-201ENST00000301671 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
GHDC-201ENST00000301671 CADPSQ9ULU8 1353 aa22.78■■□□□ 1.24
GHDC-201ENST00000301671 MAP3K1Q13233 1512 aa22.76■■□□□ 1.23
GHDC-201ENST00000301671 FHOD3Q2V2M9 1422 aa22.76■■□□□ 1.23
GHDC-201ENST00000301671 FKBP8Q14318 412 aa22.75■■□□□ 1.23
GHDC-201ENST00000301671 PCF11O94913 1555 aaKnown RBP22.74■■□□□ 1.23
GHDC-201ENST00000301671 PPP1R15AO75807 674 aaPredicted RBP22.73■■□□□ 1.23
GHDC-201ENST00000301671 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
GHDC-201ENST00000301671 TRIM52Q96A61 297 aa22.71■■□□□ 1.23
GHDC-201ENST00000301671 PRDM2Q13029 1718 aa22.69■■□□□ 1.22
GHDC-201ENST00000301671 RAD54L2Q9Y4B4 1467 aa22.68■■□□□ 1.22
GHDC-201ENST00000301671 CFAP43Q8NDM7 1665 aa22.63■■□□□ 1.21
GHDC-201ENST00000301671 ANP32CO43423 234 aa22.61■■□□□ 1.21
GHDC-201ENST00000301671 FANCD2Q9BXW9 1451 aa22.59■■□□□ 1.21
GHDC-201ENST00000301671 TIMELESSQ9UNS1 1208 aa22.57■■□□□ 1.2
GHDC-201ENST00000301671 TONSLQ96HA7 1378 aa22.56■■□□□ 1.2
GHDC-201ENST00000301671 CASKIN1Q8WXD9 1431 aa22.55■■□□□ 1.2
GHDC-201ENST00000301671 FYCO1Q9BQS8 1478 aa22.54■■□□□ 1.2
GHDC-201ENST00000301671 PTPRKQ15262 1439 aa22.53■■□□□ 1.2
GHDC-201ENST00000301671 FGD6Q6ZV73 1430 aa22.52■■□□□ 1.2
GHDC-201ENST00000301671 NEFLP07196 543 aa22.52■■□□□ 1.2
GHDC-201ENST00000301671 CCER2I3L3R5 266 aa22.51■■□□□ 1.19
GHDC-201ENST00000301671 MTUS2Q5JR59 1369 aa22.51■■□□□ 1.19
GHDC-201ENST00000301671 POLA1P09884 1462 aaPredicted RBP22.5■■□□□ 1.19
GHDC-201ENST00000301671 CCDC18Q5T9S5 1454 aa22.49■■□□□ 1.19
GHDC-201ENST00000301671 ANP32EQ9BTT0 268 aa22.49■■□□□ 1.19
GHDC-201ENST00000301671 NESP48681 1621 aa22.48■■□□□ 1.19
GHDC-201ENST00000301671 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
GHDC-201ENST00000301671 TOPBP1Q92547 1522 aa22.45■■□□□ 1.18
GHDC-201ENST00000301671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.45■■□□□ 1.18
GHDC-201ENST00000301671 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
GHDC-201ENST00000301671 EFCAB5A4FU69 1503 aa22.44■■□□□ 1.18
GHDC-201ENST00000301671 CHIC2Q9UKJ5 165 aa22.43■■□□□ 1.18
GHDC-201ENST00000301671 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
GHDC-201ENST00000301671 FMN1Q68DA7 1419 aa22.42■■□□□ 1.18
GHDC-201ENST00000301671 AQRO60306 1485 aaKnown RBP eCLIP22.42■■□□□ 1.18
GHDC-201ENST00000301671 RRP7BPQ9NSQ0 103 aa22.42■■□□□ 1.18
GHDC-201ENST00000301671 TDRD9Q8NDG6 1382 aaKnown RBP22.41■■□□□ 1.18
GHDC-201ENST00000301671 SNAPC4Q5SXM2 1469 aa22.4■■□□□ 1.18
GHDC-201ENST00000301671 UACAQ9BZF9 1416 aa22.4■■□□□ 1.18
GHDC-201ENST00000301671 RBM19Q9Y4C8 960 aaKnown RBP22.39■■□□□ 1.18
GHDC-201ENST00000301671 HFM1A2PYH4 1435 aa22.39■■□□□ 1.17
GHDC-201ENST00000301671 IRX6P78412 446 aaPredicted RBP22.39■■□□□ 1.17
GHDC-201ENST00000301671 NAIPQ13075 1403 aa22.37■■□□□ 1.17
GHDC-201ENST00000301671 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
GHDC-201ENST00000301671 PTPN23Q9H3S7 1636 aa22.36■■□□□ 1.17
GHDC-201ENST00000301671 NCOA2Q15596 1464 aa22.36■■□□□ 1.17
GHDC-201ENST00000301671 CTTNBP2Q8WZ74 1663 aa22.36■■□□□ 1.17
GHDC-201ENST00000301671 ARID3CA6NKF2 412 aa22.33■■□□□ 1.17
GHDC-201ENST00000301671 MYOM3Q5VTT5 1437 aa22.32■■□□□ 1.16
GHDC-201ENST00000301671 CUL7Q14999 1698 aa22.32■■□□□ 1.16
GHDC-201ENST00000301671 LRRIQ1Q96JM4 1722 aa22.31■■□□□ 1.16
GHDC-201ENST00000301671 HSPA5P11021 654 aaKnown RBP22.31■■□□□ 1.16
GHDC-201ENST00000301671 WASHC2AQ641Q2 1341 aa22.29■■□□□ 1.16
GHDC-201ENST00000301671 FOXD1Q16676 465 aa22.28■■□□□ 1.16
GHDC-201ENST00000301671 KDM5BQ9UGL1 1544 aa22.27■■□□□ 1.16
GHDC-201ENST00000301671 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
GHDC-201ENST00000301671 CCDC184Q52MB2 194 aa22.25■■□□□ 1.15
GHDC-201ENST00000301671 GRIN2BQ13224 1484 aa22.25■■□□□ 1.15
GHDC-201ENST00000301671 MAGI3Q5TCQ9 1506 aa22.22■■□□□ 1.15
GHDC-201ENST00000301671 SAMD9Q5K651 1589 aa22.21■■□□□ 1.15
GHDC-201ENST00000301671 GAPVD1Q14C86 1478 aa22.21■■□□□ 1.15
GHDC-201ENST00000301671 SUPT6HQ7KZ85 1726 aaKnown RBP22.19■■□□□ 1.14
GHDC-201ENST00000301671 DENND4BO75064 1496 aaPredicted RBP22.19■■□□□ 1.14
GHDC-201ENST00000301671 C11orf95C9JLR9 678 aaPredicted RBP22.18■■□□□ 1.14
GHDC-201ENST00000301671 EIF4G2P78344 907 aaKnown RBP eCLIP22.17■■□□□ 1.14
GHDC-201ENST00000301671 L3MBTL2Q969R5 705 aa22.17■■□□□ 1.14
GHDC-201ENST00000301671 DNAJC5BQ9UF47 199 aa22.17■■□□□ 1.14
GHDC-201ENST00000301671 MPHOSPH9Q99550 1183 aa22.16■■□□□ 1.14
GHDC-201ENST00000301671 KDM6BO15054 1643 aa22.16■■□□□ 1.14
GHDC-201ENST00000301671 EHBP1L1Q8N3D4 1523 aa22.16■■□□□ 1.14
GHDC-201ENST00000301671 UGGT2Q9NYU1 1516 aa22.15■■□□□ 1.14
GHDC-201ENST00000301671 MSH5O43196 834 aa22.14■■□□□ 1.14
GHDC-201ENST00000301671 FAM9BQ8IZU0 186 aa22.14■■□□□ 1.14
GHDC-201ENST00000301671 ABCA5Q8WWZ7 1642 aa22.12■■□□□ 1.13
GHDC-201ENST00000301671 CNGB1Q14028 1251 aaPredicted RBP22.11■■□□□ 1.13
GHDC-201ENST00000301671 NBPF8Q3BBV2 869 aa22.07■■□□□ 1.12
GHDC-201ENST00000301671 ARHGEF11O15085 1522 aa22.07■■□□□ 1.12
GHDC-201ENST00000301671 CDK13Q14004 1512 aaKnown RBP22.07■■□□□ 1.12
GHDC-201ENST00000301671 CDK11AQ9UQ88 783 aaPredicted RBP22.07■■□□□ 1.12
GHDC-201ENST00000301671 LAMC3Q9Y6N6 1575 aa22.06■■□□□ 1.12
GHDC-201ENST00000301671 MRS2Q9HD23 443 aa22.05■■□□□ 1.12
GHDC-201ENST00000301671 CNTLNQ9NXG0 1405 aa22.05■■□□□ 1.12
GHDC-201ENST00000301671 THOC2Q8NI27 1593 aaKnown RBP22.05■■□□□ 1.12
GHDC-201ENST00000301671 PRKRIP1Q9H875 184 aaPredicted RBP22.05■■□□□ 1.12
GHDC-201ENST00000301671 TCOF1Q13428 1488 aaKnown RBP22.03■■□□□ 1.12
GHDC-201ENST00000301671 ZNF644Q9H582 1327 aaPredicted RBP22.03■■□□□ 1.12
GHDC-201ENST00000301671 CCDC7Q96M83 1385 aa22.02■■□□□ 1.12
GHDC-201ENST00000301671 EPRSP07814 1512 aaKnown RBP22.02■■□□□ 1.12
GHDC-201ENST00000301671 HECW1Q76N89 1606 aa22.01■■□□□ 1.11
GHDC-201ENST00000301671 GCC2Q8IWJ2 1684 aa22■■□□□ 1.11
GHDC-201ENST00000301671 B4GALNT3Q6L9W6 998 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms