RNA–Protein interactions for RNA: ENST00000296577.8

ABCE1-201, Transcript of ATP binding cassette subfamily E member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCE1, Length 3,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-201ENST00000296577 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
ABCE1-201ENST00000296577 RAD54L2Q9Y4B4 1467 aa13.28□□□□□ -0.28
ABCE1-201ENST00000296577 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
ABCE1-201ENST00000296577 FHOD3Q2V2M9 1422 aa13.28□□□□□ -0.28
ABCE1-201ENST00000296577 KCNH8Q96L42 1107 aa13.27□□□□□ -0.29
ABCE1-201ENST00000296577 NESP48681 1621 aa13.24□□□□□ -0.29
ABCE1-201ENST00000296577 MTUS2Q5JR59 1369 aa13.24□□□□□ -0.29
ABCE1-201ENST00000296577 HMGXB3Q12766 1538 aa13.23□□□□□ -0.29
ABCE1-201ENST00000296577 RRP7BPQ9NSQ0 103 aa13.23□□□□□ -0.29
ABCE1-201ENST00000296577 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
ABCE1-201ENST00000296577 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
ABCE1-201ENST00000296577 FBLN2P98095 1184 aa13.22□□□□□ -0.29
ABCE1-201ENST00000296577 PHLDB1Q86UU1 1377 aa13.21□□□□□ -0.3
ABCE1-201ENST00000296577 CLSPNQ9HAW4 1339 aa13.21□□□□□ -0.3
ABCE1-201ENST00000296577 BIVM-ERCC5R4GMW8 1640 aa13.21□□□□□ -0.3
ABCE1-201ENST00000296577 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
ABCE1-201ENST00000296577 SETD5Q9C0A6 1442 aa13.18□□□□□ -0.3
ABCE1-201ENST00000296577 TONSLQ96HA7 1378 aa13.16□□□□□ -0.3
ABCE1-201ENST00000296577 FHAD1B1AJZ9 1412 aa13.15□□□□□ -0.3
ABCE1-201ENST00000296577 RRBP1Q9P2E9 1410 aaKnown RBP13.15□□□□□ -0.3
ABCE1-201ENST00000296577 CC2D2AQ9P2K1 1620 aa13.15□□□□□ -0.3
ABCE1-201ENST00000296577 ANP32CO43423 234 aa13.14□□□□□ -0.31
ABCE1-201ENST00000296577 ZNF777Q9ULD5 760 aaPredicted RBP13.12□□□□□ -0.31
ABCE1-201ENST00000296577 NEFLP07196 543 aa13.11□□□□□ -0.31
ABCE1-201ENST00000296577 ZNF326Q5BKZ1 582 aaKnown RBP13.11□□□□□ -0.31
ABCE1-201ENST00000296577 LRRC9Q6ZRR7 1453 aa13.11□□□□□ -0.31
ABCE1-201ENST00000296577 FOXD1Q16676 465 aa13.11□□□□□ -0.31
ABCE1-201ENST00000296577 FKBP8Q14318 412 aa13.1□□□□□ -0.31
ABCE1-201ENST00000296577 SUPT16HQ9Y5B9 1047 aaKnown RBP13.08□□□□□ -0.32
ABCE1-201ENST00000296577 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
ABCE1-201ENST00000296577 PPP1R15AO75807 674 aaPredicted RBP13.05□□□□□ -0.32
ABCE1-201ENST00000296577 TIAM1Q13009 1591 aa13.05□□□□□ -0.32
ABCE1-201ENST00000296577 TOPBP1Q92547 1522 aa13.05□□□□□ -0.32
ABCE1-201ENST00000296577 SENP3-EIF4A1A0A087X0R7 540 aa13.04□□□□□ -0.32
ABCE1-201ENST00000296577 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.33
ABCE1-201ENST00000296577 FMN1Q68DA7 1419 aa13.01□□□□□ -0.33
ABCE1-201ENST00000296577 PCF11O94913 1555 aaKnown RBP13□□□□□ -0.33
ABCE1-201ENST00000296577 HNRNPUQ00839 825 aaKnown RBP eCLIP13□□□□□ -0.33
ABCE1-201ENST00000296577 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
ABCE1-201ENST00000296577 PDS5BQ9NTI5 1447 aa12.98□□□□□ -0.33
ABCE1-201ENST00000296577 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.339e-7■■■■■ 29.5
ABCE1-201ENST00000296577 WDR97A6NE52 1622 aa12.98□□□□□ -0.33
ABCE1-201ENST00000296577 FAM9BQ8IZU0 186 aa12.96□□□□□ -0.33
ABCE1-201ENST00000296577 CHMP7Q8WUX9 453 aaPredicted RBP12.96□□□□□ -0.33
ABCE1-201ENST00000296577 FGD6Q6ZV73 1430 aa12.96□□□□□ -0.33
ABCE1-201ENST00000296577 CASKIN1Q8WXD9 1431 aa12.95□□□□□ -0.34
ABCE1-201ENST00000296577 SLC4A1APQ9BWU0 796 aaKnown RBP12.95□□□□□ -0.34
ABCE1-201ENST00000296577 DNMBPQ6XZF7 1577 aa12.94□□□□□ -0.34
ABCE1-201ENST00000296577 ABCA10Q8WWZ4 1543 aa12.94□□□□□ -0.34
ABCE1-201ENST00000296577 MAPKBP1O60336 1514 aa12.94□□□□□ -0.34
ABCE1-201ENST00000296577 ZNF644Q9H582 1327 aaPredicted RBP12.93□□□□□ -0.34
ABCE1-201ENST00000296577 CCDC18Q5T9S5 1454 aa12.93□□□□□ -0.34
ABCE1-201ENST00000296577 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
ABCE1-201ENST00000296577 HSPA5P11021 654 aaKnown RBP12.93□□□□□ -0.34
ABCE1-201ENST00000296577 EIF4G2P78344 907 aaKnown RBP eCLIP12.91□□□□□ -0.34
ABCE1-201ENST00000296577 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
ABCE1-201ENST00000296577 MPHOSPH9Q99550 1183 aa12.91□□□□□ -0.34
ABCE1-201ENST00000296577 FYCO1Q9BQS8 1478 aa12.91□□□□□ -0.34
ABCE1-201ENST00000296577 NCOA2Q15596 1464 aa12.9□□□□□ -0.34
ABCE1-201ENST00000296577 L3MBTL2Q969R5 705 aa12.9□□□□□ -0.34
ABCE1-201ENST00000296577 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
ABCE1-201ENST00000296577 PTPRKQ15262 1439 aa12.89□□□□□ -0.35
ABCE1-201ENST00000296577 TIMELESSQ9UNS1 1208 aa12.89□□□□□ -0.35
ABCE1-201ENST00000296577 CFDP1Q9UEE9 299 aaPredicted RBP12.89□□□□□ -0.35
ABCE1-201ENST00000296577 MYOM3Q5VTT5 1437 aa12.86□□□□□ -0.35
ABCE1-201ENST00000296577 MRS2Q9HD23 443 aa12.85□□□□□ -0.35
ABCE1-201ENST00000296577 MAP3K1Q13233 1512 aa12.83□□□□□ -0.36
ABCE1-201ENST00000296577 TSHZ2Q9NRE2 1034 aa12.83□□□□□ -0.36
ABCE1-201ENST00000296577 EFCAB5A4FU69 1503 aa12.82□□□□□ -0.36
ABCE1-201ENST00000296577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.82□□□□□ -0.363e-8■■■□□ 14.6
ABCE1-201ENST00000296577 UACAQ9BZF9 1416 aa12.82□□□□□ -0.36
ABCE1-201ENST00000296577 NAIPQ13075 1403 aa12.81□□□□□ -0.36
ABCE1-201ENST00000296577 CDK13Q14004 1512 aaKnown RBP12.81□□□□□ -0.36
ABCE1-201ENST00000296577 SALL2Q9Y467 1007 aaPredicted RBP12.81□□□□□ -0.36
ABCE1-201ENST00000296577 ERCC6Q03468 1493 aa12.8□□□□□ -0.36
ABCE1-201ENST00000296577 CCER2I3L3R5 266 aa12.8□□□□□ -0.36
ABCE1-201ENST00000296577 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
ABCE1-201ENST00000296577 MYT1LQ9UL68 1186 aa12.79□□□□□ -0.36
ABCE1-201ENST00000296577 HFM1A2PYH4 1435 aa12.79□□□□□ -0.36
ABCE1-201ENST00000296577 PLEKHD1A6NEE1 506 aa12.78□□□□□ -0.36
ABCE1-201ENST00000296577 CCDC184Q52MB2 194 aa12.78□□□□□ -0.36
ABCE1-201ENST00000296577 WASHC2AQ641Q2 1341 aa12.78□□□□□ -0.36
ABCE1-201ENST00000296577 RGL3Q3MIN7 710 aa12.78□□□□□ -0.36
ABCE1-201ENST00000296577 PKD2Q13563 968 aa12.78□□□□□ -0.36
ABCE1-201ENST00000296577 CUL7Q14999 1698 aa12.77□□□□□ -0.37
ABCE1-201ENST00000296577 TSPY4P0CV99 314 aa12.76□□□□□ -0.37
ABCE1-201ENST00000296577 TSPY10P0CW01 314 aa12.76□□□□□ -0.37
ABCE1-201ENST00000296577 SNAPC4Q5SXM2 1469 aa12.76□□□□□ -0.37
ABCE1-201ENST00000296577 ZNF608Q9ULD9 1512 aaPredicted RBP12.76□□□□□ -0.37
ABCE1-201ENST00000296577 NBPF8Q3BBV2 869 aa12.76□□□□□ -0.37
ABCE1-201ENST00000296577 LAMC3Q9Y6N6 1575 aa12.76□□□□□ -0.37
ABCE1-201ENST00000296577 C11orf95C9JLR9 678 aaPredicted RBP12.75□□□□□ -0.37
ABCE1-201ENST00000296577 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
ABCE1-201ENST00000296577 CFAP43Q8NDM7 1665 aa12.74□□□□□ -0.37
ABCE1-201ENST00000296577 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
ABCE1-201ENST00000296577 HNRNPMP52272 730 aaKnown RBP eCLIP12.73□□□□□ -0.37
ABCE1-201ENST00000296577 CTTNBP2Q8WZ74 1663 aa12.72□□□□□ -0.37
ABCE1-201ENST00000296577 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
ABCE1-201ENST00000296577 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.72□□□□□ -0.37
ABCE1-201ENST00000296577 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms