RNA–Protein interactions for RNA: ENST00000296140.3

CCR1-201, Transcript of C-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR1, Length 2,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1-201ENST00000296140 TIAM1Q13009 1591 aa13.89□□□□□ -0.19
CCR1-201ENST00000296140 FAM50AQ14320 339 aaKnown RBP13.87□□□□□ -0.19
CCR1-201ENST00000296140 HIRIP3Q9BW71 556 aaPredicted RBP13.86□□□□□ -0.19
CCR1-201ENST00000296140 DDX10Q13206 875 aaKnown RBP13.85□□□□□ -0.19
CCR1-201ENST00000296140 CARMIL1Q5VZK9 1371 aa13.85□□□□□ -0.19
CCR1-201ENST00000296140 WDR97A6NE52 1622 aa13.85□□□□□ -0.19
CCR1-201ENST00000296140 ATP1B4Q9UN42 357 aaPredicted RBP13.84□□□□□ -0.19
CCR1-201ENST00000296140 SETD5Q9C0A6 1442 aa13.84□□□□□ -0.19
CCR1-201ENST00000296140 LRRC9Q6ZRR7 1453 aa13.84□□□□□ -0.19
CCR1-201ENST00000296140 BCANQ96GW7 911 aa13.84□□□□□ -0.19
CCR1-201ENST00000296140 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
CCR1-201ENST00000296140 FGD5Q6ZNL6 1462 aa13.82□□□□□ -0.2
CCR1-201ENST00000296140 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
CCR1-201ENST00000296140 MAP3K1Q13233 1512 aa13.78□□□□□ -0.2
CCR1-201ENST00000296140 FHOD3Q2V2M9 1422 aa13.78□□□□□ -0.2
CCR1-201ENST00000296140 CADPSQ9ULU8 1353 aa13.76□□□□□ -0.21
CCR1-201ENST00000296140 PPP1R15AO75807 674 aaPredicted RBP13.75□□□□□ -0.21
CCR1-201ENST00000296140 FKBP8Q14318 412 aa13.74□□□□□ -0.21
CCR1-201ENST00000296140 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
CCR1-201ENST00000296140 CFAP43Q8NDM7 1665 aa13.73□□□□□ -0.21
CCR1-201ENST00000296140 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
CCR1-201ENST00000296140 FHAD1B1AJZ9 1412 aa13.72□□□□□ -0.21
CCR1-201ENST00000296140 RAD54L2Q9Y4B4 1467 aa13.72□□□□□ -0.21
CCR1-201ENST00000296140 TRIM52Q96A61 297 aa13.72□□□□□ -0.21
CCR1-201ENST00000296140 PTPRKQ15262 1439 aa13.66□□□□□ -0.22
CCR1-201ENST00000296140 FANCD2Q9BXW9 1451 aa13.65□□□□□ -0.22
CCR1-201ENST00000296140 RTN4Q9NQC3 1192 aaKnown RBP13.64□□□□□ -0.23
CCR1-201ENST00000296140 FYCO1Q9BQS8 1478 aa13.64□□□□□ -0.23
CCR1-201ENST00000296140 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
CCR1-201ENST00000296140 FGD6Q6ZV73 1430 aa13.63□□□□□ -0.23
CCR1-201ENST00000296140 POLA1P09884 1462 aaPredicted RBP13.62□□□□□ -0.23
CCR1-201ENST00000296140 ANP32CO43423 234 aa13.62□□□□□ -0.23
CCR1-201ENST00000296140 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
CCR1-201ENST00000296140 TONSLQ96HA7 1378 aa13.61□□□□□ -0.23
CCR1-201ENST00000296140 TIMELESSQ9UNS1 1208 aa13.61□□□□□ -0.23
CCR1-201ENST00000296140 NESP48681 1621 aa13.6□□□□□ -0.23
CCR1-201ENST00000296140 ANP32EQ9BTT0 268 aa13.6□□□□□ -0.23
CCR1-201ENST00000296140 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
CCR1-201ENST00000296140 AQRO60306 1485 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCR1-201ENST00000296140 CCER2I3L3R5 266 aa13.59□□□□□ -0.23
CCR1-201ENST00000296140 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
CCR1-201ENST00000296140 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
CCR1-201ENST00000296140 MTUS2Q5JR59 1369 aa13.58□□□□□ -0.23
CCR1-201ENST00000296140 EFCAB5A4FU69 1503 aa13.58□□□□□ -0.24
CCR1-201ENST00000296140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCR1-201ENST00000296140 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
CCR1-201ENST00000296140 CC2D2AQ9P2K1 1620 aa13.56□□□□□ -0.24
CCR1-201ENST00000296140 NEFLP07196 543 aa13.56□□□□□ -0.24
CCR1-201ENST00000296140 PTPN23Q9H3S7 1636 aa13.55□□□□□ -0.24
CCR1-201ENST00000296140 HFM1A2PYH4 1435 aa13.55□□□□□ -0.24
CCR1-201ENST00000296140 NAIPQ13075 1403 aa13.55□□□□□ -0.24
CCR1-201ENST00000296140 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
CCR1-201ENST00000296140 LRRIQ1Q96JM4 1722 aa13.54□□□□□ -0.24
CCR1-201ENST00000296140 CTTNBP2Q8WZ74 1663 aa13.54□□□□□ -0.24
CCR1-201ENST00000296140 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
CCR1-201ENST00000296140 KDM5BQ9UGL1 1544 aa13.54□□□□□ -0.24
CCR1-201ENST00000296140 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
CCR1-201ENST00000296140 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
CCR1-201ENST00000296140 IRX6P78412 446 aaPredicted RBP13.53□□□□□ -0.24
CCR1-201ENST00000296140 NCOA2Q15596 1464 aa13.53□□□□□ -0.24
CCR1-201ENST00000296140 RRP7BPQ9NSQ0 103 aa13.52□□□□□ -0.24
CCR1-201ENST00000296140 CHIC2Q9UKJ5 165 aa13.52□□□□□ -0.24
CCR1-201ENST00000296140 CUL7Q14999 1698 aa13.51□□□□□ -0.25
CCR1-201ENST00000296140 MYOM3Q5VTT5 1437 aa13.5□□□□□ -0.25
CCR1-201ENST00000296140 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCR1-201ENST00000296140 MAGI3Q5TCQ9 1506 aa13.48□□□□□ -0.25
CCR1-201ENST00000296140 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
CCR1-201ENST00000296140 WASHC2AQ641Q2 1341 aa13.48□□□□□ -0.25
CCR1-201ENST00000296140 URB2Q14146 1524 aaKnown RBP13.48□□□□□ -0.25
CCR1-201ENST00000296140 DENND4BO75064 1496 aaPredicted RBP13.48□□□□□ -0.25
CCR1-201ENST00000296140 HSPA5P11021 654 aaKnown RBP13.48□□□□□ -0.25
CCR1-201ENST00000296140 ARID3CA6NKF2 412 aa13.47□□□□□ -0.25
CCR1-201ENST00000296140 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
CCR1-201ENST00000296140 SAMD9Q5K651 1589 aa13.46□□□□□ -0.25
CCR1-201ENST00000296140 FOXD1Q16676 465 aa13.46□□□□□ -0.26
CCR1-201ENST00000296140 KDM6BO15054 1643 aa13.44□□□□□ -0.26
CCR1-201ENST00000296140 MSH5O43196 834 aa13.42□□□□□ -0.26
CCR1-201ENST00000296140 SUPT6HQ7KZ85 1726 aaKnown RBP13.42□□□□□ -0.26
CCR1-201ENST00000296140 UGGT2Q9NYU1 1516 aa13.42□□□□□ -0.26
CCR1-201ENST00000296140 C11orf95C9JLR9 678 aaPredicted RBP13.42□□□□□ -0.26
CCR1-201ENST00000296140 EHBP1L1Q8N3D4 1523 aa13.42□□□□□ -0.26
CCR1-201ENST00000296140 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
CCR1-201ENST00000296140 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
CCR1-201ENST00000296140 ABCA5Q8WWZ7 1642 aa13.41□□□□□ -0.26
CCR1-201ENST00000296140 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
CCR1-201ENST00000296140 L3MBTL2Q969R5 705 aa13.39□□□□□ -0.27
CCR1-201ENST00000296140 CDK13Q14004 1512 aaKnown RBP13.37□□□□□ -0.27
CCR1-201ENST00000296140 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCR1-201ENST00000296140 MPHOSPH9Q99550 1183 aa13.37□□□□□ -0.27
CCR1-201ENST00000296140 THOC2Q8NI27 1593 aaKnown RBP13.36□□□□□ -0.27
CCR1-201ENST00000296140 LAMC3Q9Y6N6 1575 aa13.36□□□□□ -0.27
CCR1-201ENST00000296140 FAM9BQ8IZU0 186 aa13.35□□□□□ -0.27
CCR1-201ENST00000296140 NBPF8Q3BBV2 869 aa13.35□□□□□ -0.27
CCR1-201ENST00000296140 TCOF1Q13428 1488 aaKnown RBP13.35□□□□□ -0.27
CCR1-201ENST00000296140 CNTLNQ9NXG0 1405 aa13.35□□□□□ -0.27
CCR1-201ENST00000296140 HECW1Q76N89 1606 aa13.34□□□□□ -0.27
CCR1-201ENST00000296140 GCC2Q8IWJ2 1684 aa13.34□□□□□ -0.27
CCR1-201ENST00000296140 PRKRIP1Q9H875 184 aaPredicted RBP13.33□□□□□ -0.28
CCR1-201ENST00000296140 EPRSP07814 1512 aaKnown RBP13.32□□□□□ -0.28
CCR1-201ENST00000296140 CNGB1Q14028 1251 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms