RNA–Protein interactions for RNA: ENST00000296140.3

CCR1-201, Transcript of C-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR1, Length 2,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1-201ENST00000296140 NISCHQ9Y2I1 1504 aa19.42■□□□□ 0.7
CCR1-201ENST00000296140 SHROOM4Q9ULL8 1493 aa16.95■□□□□ 0.3
CCR1-201ENST00000296140 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
CCR1-201ENST00000296140 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
CCR1-201ENST00000296140 MYO15BQ96JP2 1530 aa16.32■□□□□ 0.2
CCR1-201ENST00000296140 CCDC180Q9P1Z9 1646 aa16.28■□□□□ 0.2
CCR1-201ENST00000296140 DCAF8L2P0C7V8 631 aa16.25■□□□□ 0.19
CCR1-201ENST00000296140 CHIC1Q5VXU3 224 aa16.25■□□□□ 0.19
CCR1-201ENST00000296140 HRCP23327 699 aa16.08■□□□□ 0.16
CCR1-201ENST00000296140 PCGF6Q9BYE7 350 aa16.01■□□□□ 0.15
CCR1-201ENST00000296140 PPARGC1BQ86YN6 1023 aaKnown RBP15.89■□□□□ 0.13
CCR1-201ENST00000296140 LOC105371045A0A1W2PR82 267 aa15.88■□□□□ 0.13
CCR1-201ENST00000296140 DCAF1Q9Y4B6 1507 aa15.8■□□□□ 0.12
CCR1-201ENST00000296140 ABCC9O60706 1549 aa15.57■□□□□ 0.08
CCR1-201ENST00000296140 TRIM26Q12899 539 aaPredicted RBP15.52■□□□□ 0.08
CCR1-201ENST00000296140 SCRIBQ14160 1630 aa15.51■□□□□ 0.07
CCR1-201ENST00000296140 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
CCR1-201ENST00000296140 FAM9AQ8IZU1 332 aaPredicted RBP15.45■□□□□ 0.06
CCR1-201ENST00000296140 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
CCR1-201ENST00000296140 RB1CC1Q8TDY2 1594 aa15.42■□□□□ 0.06
CCR1-201ENST00000296140 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
CCR1-201ENST00000296140 AEBP2Q6ZN18 517 aaPredicted RBP15.41■□□□□ 0.06
CCR1-201ENST00000296140 CECR2Q9BXF3 1484 aa15.26■□□□□ 0.03
CCR1-201ENST00000296140 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
CCR1-201ENST00000296140 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
CCR1-201ENST00000296140 WIZO95785 1651 aa15.11■□□□□ 0.01
CCR1-201ENST00000296140 NACADO15069 1562 aa15.03■□□□□ -0
CCR1-201ENST00000296140 SCAF1Q9H7N4 1312 aaKnown RBP15.02□□□□□ -0.01
CCR1-201ENST00000296140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
CCR1-201ENST00000296140 TTBK1Q5TCY1 1321 aaPredicted RBP14.96□□□□□ -0.01
CCR1-201ENST00000296140 EIF4G1Q04637 1599 aaKnown RBP14.95□□□□□ -0.02
CCR1-201ENST00000296140 BAZ1AQ9NRL2 1556 aaPredicted RBP14.95□□□□□ -0.02
CCR1-201ENST00000296140 ABCC8Q09428 1581 aa14.91□□□□□ -0.02
CCR1-201ENST00000296140 CCER1Q8TC90 406 aaPredicted RBP14.9□□□□□ -0.02
CCR1-201ENST00000296140 CCDC88BA6NC98 1476 aa14.88□□□□□ -0.03
CCR1-201ENST00000296140 SOGA1O94964 1423 aa14.81□□□□□ -0.04
CCR1-201ENST00000296140 TOP2AP11388 1531 aaKnown RBP14.79□□□□□ -0.04
CCR1-201ENST00000296140 CEP162Q5TB80 1403 aa14.78□□□□□ -0.04
CCR1-201ENST00000296140 NEUROD1Q13562 356 aa14.77□□□□□ -0.04
CCR1-201ENST00000296140 SMARCA2P51531 1590 aa14.76□□□□□ -0.05
CCR1-201ENST00000296140 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
CCR1-201ENST00000296140 SMARCA4P51532 1647 aa14.75□□□□□ -0.05
CCR1-201ENST00000296140 WRNQ14191 1432 aaPredicted RBP eCLIP14.73□□□□□ -0.05
CCR1-201ENST00000296140 ACIN1Q9UKV3 1341 aaKnown RBP14.73□□□□□ -0.05
CCR1-201ENST00000296140 DIEXFQ68CQ4 756 aaKnown RBP14.72□□□□□ -0.05
CCR1-201ENST00000296140 SLC24A1O60721 1099 aa14.71□□□□□ -0.06
CCR1-201ENST00000296140 UBTFP17480 764 aaKnown RBP14.68□□□□□ -0.06
CCR1-201ENST00000296140 PELP1Q8IZL8 1130 aaKnown RBP14.68□□□□□ -0.06
CCR1-201ENST00000296140 TNIKQ9UKE5 1360 aa14.68□□□□□ -0.06
CCR1-201ENST00000296140 CSRNP3Q8WYN3 585 aa14.66□□□□□ -0.06
CCR1-201ENST00000296140 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
CCR1-201ENST00000296140 GTF3C3Q9Y5Q9 886 aa14.62□□□□□ -0.07
CCR1-201ENST00000296140 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
CCR1-201ENST00000296140 GOLGA3Q08378 1498 aa14.56□□□□□ -0.08
CCR1-201ENST00000296140 EEA1Q15075 1411 aa14.55□□□□□ -0.08
CCR1-201ENST00000296140 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
CCR1-201ENST00000296140 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
CCR1-201ENST00000296140 ZNF316A6NFI3 1004 aaPredicted RBP14.52□□□□□ -0.09
CCR1-201ENST00000296140 YTHDC1Q96MU7 727 aaKnown RBP14.5□□□□□ -0.09
CCR1-201ENST00000296140 SYNJ1O43426 1573 aa14.5□□□□□ -0.09
CCR1-201ENST00000296140 RANGAP1P46060 587 aaPredicted RBP14.49□□□□□ -0.09
CCR1-201ENST00000296140 BICRAQ9NZM4 1560 aa14.47□□□□□ -0.09
CCR1-201ENST00000296140 CLIP1P30622 1438 aa14.45□□□□□ -0.1
CCR1-201ENST00000296140 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
CCR1-201ENST00000296140 MIER1Q8N108 512 aa14.43□□□□□ -0.1
CCR1-201ENST00000296140 RAPGEF2Q9Y4G8 1499 aa14.41□□□□□ -0.1
CCR1-201ENST00000296140 KIF21BO75037 1637 aa14.39□□□□□ -0.11
CCR1-201ENST00000296140 VPS8Q8N3P4 1428 aa14.38□□□□□ -0.11
CCR1-201ENST00000296140 PEG3Q9GZU2 1588 aa14.37□□□□□ -0.11
CCR1-201ENST00000296140 ATAD2BQ9ULI0 1458 aa14.34□□□□□ -0.11
CCR1-201ENST00000296140 APLP2Q06481 763 aa14.31□□□□□ -0.12
CCR1-201ENST00000296140 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
CCR1-201ENST00000296140 KANK4Q5T7N3 995 aaPredicted RBP14.24□□□□□ -0.13
CCR1-201ENST00000296140 TOP2BQ02880 1626 aa14.21□□□□□ -0.13
CCR1-201ENST00000296140 DHX57Q6P158 1386 aaKnown RBP14.21□□□□□ -0.13
CCR1-201ENST00000296140 ARAP1Q96P48 1450 aa14.21□□□□□ -0.13
CCR1-201ENST00000296140 PRXQ9BXM0 1461 aa14.16□□□□□ -0.14
CCR1-201ENST00000296140 BIVM-ERCC5R4GMW8 1640 aa14.13□□□□□ -0.15
CCR1-201ENST00000296140 ERICH3Q5RHP9 1530 aa14.11□□□□□ -0.15
CCR1-201ENST00000296140 ITGAEP38570 1179 aa14.11□□□□□ -0.15
CCR1-201ENST00000296140 CUX1P39880 1505 aa14.11□□□□□ -0.15
CCR1-201ENST00000296140 CLSPNQ9HAW4 1339 aa14.07□□□□□ -0.16
CCR1-201ENST00000296140 RRBP1Q9P2E9 1410 aaKnown RBP14.07□□□□□ -0.16
CCR1-201ENST00000296140 ARHGAP35Q9NRY4 1499 aa14.05□□□□□ -0.16
CCR1-201ENST00000296140 KIF27Q86VH2 1401 aa14.03□□□□□ -0.16
CCR1-201ENST00000296140 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
CCR1-201ENST00000296140 KCNH8Q96L42 1107 aa14.01□□□□□ -0.17
CCR1-201ENST00000296140 SUPT16HQ9Y5B9 1047 aaKnown RBP14.01□□□□□ -0.17
CCR1-201ENST00000296140 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
CCR1-201ENST00000296140 CUX2O14529 1486 aa13.98□□□□□ -0.17
CCR1-201ENST00000296140 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
CCR1-201ENST00000296140 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
CCR1-201ENST00000296140 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
CCR1-201ENST00000296140 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
CCR1-201ENST00000296140 CFTRP13569 1480 aa13.95□□□□□ -0.18
CCR1-201ENST00000296140 IGF1RP08069 1367 aa13.91□□□□□ -0.18
CCR1-201ENST00000296140 SIN3AQ96ST3 1273 aa13.91□□□□□ -0.18
CCR1-201ENST00000296140 MYT1Q01538 1121 aa13.9□□□□□ -0.18
CCR1-201ENST00000296140 PHLDB1Q86UU1 1377 aa13.9□□□□□ -0.18
CCR1-201ENST00000296140 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 239.8 ms