RNA–Protein interactions for RNA: ENST00000296140.3

CCR1-201, Transcript of C-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR1, Length 2,731 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1-201ENST00000296140 NISCHQ9Y2I1 1504 aa19.42■□□□□ 0.7
CCR1-201ENST00000296140 SHROOM4Q9ULL8 1493 aa16.95■□□□□ 0.3
CCR1-201ENST00000296140 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
CCR1-201ENST00000296140 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
CCR1-201ENST00000296140 MYO15BQ96JP2 1530 aa16.32■□□□□ 0.2
CCR1-201ENST00000296140 CCDC180Q9P1Z9 1646 aa16.28■□□□□ 0.2
CCR1-201ENST00000296140 DCAF8L2P0C7V8 631 aa16.25■□□□□ 0.19
CCR1-201ENST00000296140 CHIC1Q5VXU3 224 aa16.25■□□□□ 0.19
CCR1-201ENST00000296140 HRCP23327 699 aa16.08■□□□□ 0.16
CCR1-201ENST00000296140 PCGF6Q9BYE7 350 aa16.01■□□□□ 0.15
CCR1-201ENST00000296140 PPARGC1BQ86YN6 1023 aaKnown RBP15.89■□□□□ 0.13
CCR1-201ENST00000296140 LOC105371045A0A1W2PR82 267 aa15.88■□□□□ 0.13
CCR1-201ENST00000296140 DCAF1Q9Y4B6 1507 aa15.8■□□□□ 0.12
CCR1-201ENST00000296140 ABCC9O60706 1549 aa15.57■□□□□ 0.08
CCR1-201ENST00000296140 TRIM26Q12899 539 aaPredicted RBP15.52■□□□□ 0.08
CCR1-201ENST00000296140 SCRIBQ14160 1630 aa15.51■□□□□ 0.07
CCR1-201ENST00000296140 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
CCR1-201ENST00000296140 FAM9AQ8IZU1 332 aaPredicted RBP15.45■□□□□ 0.06
CCR1-201ENST00000296140 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
CCR1-201ENST00000296140 RB1CC1Q8TDY2 1594 aa15.42■□□□□ 0.06
CCR1-201ENST00000296140 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
CCR1-201ENST00000296140 AEBP2Q6ZN18 517 aaPredicted RBP15.41■□□□□ 0.06
CCR1-201ENST00000296140 CECR2Q9BXF3 1484 aa15.26■□□□□ 0.03
CCR1-201ENST00000296140 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
CCR1-201ENST00000296140 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
CCR1-201ENST00000296140 WIZO95785 1651 aa15.11■□□□□ 0.01
CCR1-201ENST00000296140 NACADO15069 1562 aa15.03■□□□□ -0
CCR1-201ENST00000296140 SCAF1Q9H7N4 1312 aaKnown RBP15.02□□□□□ -0.01
CCR1-201ENST00000296140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
CCR1-201ENST00000296140 TTBK1Q5TCY1 1321 aaPredicted RBP14.96□□□□□ -0.01
CCR1-201ENST00000296140 EIF4G1Q04637 1599 aaKnown RBP14.95□□□□□ -0.02
CCR1-201ENST00000296140 BAZ1AQ9NRL2 1556 aaPredicted RBP14.95□□□□□ -0.02
CCR1-201ENST00000296140 ABCC8Q09428 1581 aa14.91□□□□□ -0.02
CCR1-201ENST00000296140 CCER1Q8TC90 406 aaPredicted RBP14.9□□□□□ -0.02
CCR1-201ENST00000296140 CCDC88BA6NC98 1476 aa14.88□□□□□ -0.03
CCR1-201ENST00000296140 SOGA1O94964 1423 aa14.81□□□□□ -0.04
CCR1-201ENST00000296140 TOP2AP11388 1531 aaKnown RBP14.79□□□□□ -0.04
CCR1-201ENST00000296140 CEP162Q5TB80 1403 aa14.78□□□□□ -0.04
CCR1-201ENST00000296140 NEUROD1Q13562 356 aa14.77□□□□□ -0.04
CCR1-201ENST00000296140 SMARCA2P51531 1590 aa14.76□□□□□ -0.05
CCR1-201ENST00000296140 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
CCR1-201ENST00000296140 SMARCA4P51532 1647 aa14.75□□□□□ -0.05
CCR1-201ENST00000296140 WRNQ14191 1432 aaPredicted RBP eCLIP14.73□□□□□ -0.05
CCR1-201ENST00000296140 ACIN1Q9UKV3 1341 aaKnown RBP14.73□□□□□ -0.05
CCR1-201ENST00000296140 DIEXFQ68CQ4 756 aaKnown RBP14.72□□□□□ -0.05
CCR1-201ENST00000296140 SLC24A1O60721 1099 aa14.71□□□□□ -0.06
CCR1-201ENST00000296140 UBTFP17480 764 aaKnown RBP14.68□□□□□ -0.06
CCR1-201ENST00000296140 PELP1Q8IZL8 1130 aaKnown RBP14.68□□□□□ -0.06
CCR1-201ENST00000296140 TNIKQ9UKE5 1360 aa14.68□□□□□ -0.06
CCR1-201ENST00000296140 CSRNP3Q8WYN3 585 aa14.66□□□□□ -0.06
CCR1-201ENST00000296140 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
CCR1-201ENST00000296140 GTF3C3Q9Y5Q9 886 aa14.62□□□□□ -0.07
CCR1-201ENST00000296140 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
CCR1-201ENST00000296140 GOLGA3Q08378 1498 aa14.56□□□□□ -0.08
CCR1-201ENST00000296140 EEA1Q15075 1411 aa14.55□□□□□ -0.08
CCR1-201ENST00000296140 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
CCR1-201ENST00000296140 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
CCR1-201ENST00000296140 ZNF316A6NFI3 1004 aaPredicted RBP14.52□□□□□ -0.09
CCR1-201ENST00000296140 YTHDC1Q96MU7 727 aaKnown RBP14.5□□□□□ -0.09
CCR1-201ENST00000296140 SYNJ1O43426 1573 aa14.5□□□□□ -0.09
CCR1-201ENST00000296140 RANGAP1P46060 587 aaPredicted RBP14.49□□□□□ -0.09
CCR1-201ENST00000296140 BICRAQ9NZM4 1560 aa14.47□□□□□ -0.09
CCR1-201ENST00000296140 CLIP1P30622 1438 aa14.45□□□□□ -0.1
CCR1-201ENST00000296140 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
CCR1-201ENST00000296140 MIER1Q8N108 512 aa14.43□□□□□ -0.1
CCR1-201ENST00000296140 RAPGEF2Q9Y4G8 1499 aa14.41□□□□□ -0.1
CCR1-201ENST00000296140 KIF21BO75037 1637 aa14.39□□□□□ -0.11
CCR1-201ENST00000296140 VPS8Q8N3P4 1428 aa14.38□□□□□ -0.11
CCR1-201ENST00000296140 PEG3Q9GZU2 1588 aa14.37□□□□□ -0.11
CCR1-201ENST00000296140 ATAD2BQ9ULI0 1458 aa14.34□□□□□ -0.11
CCR1-201ENST00000296140 APLP2Q06481 763 aa14.31□□□□□ -0.12
CCR1-201ENST00000296140 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
CCR1-201ENST00000296140 KANK4Q5T7N3 995 aaPredicted RBP14.24□□□□□ -0.13
CCR1-201ENST00000296140 TOP2BQ02880 1626 aa14.21□□□□□ -0.13
CCR1-201ENST00000296140 DHX57Q6P158 1386 aaKnown RBP14.21□□□□□ -0.13
CCR1-201ENST00000296140 ARAP1Q96P48 1450 aa14.21□□□□□ -0.13
CCR1-201ENST00000296140 PRXQ9BXM0 1461 aa14.16□□□□□ -0.14
CCR1-201ENST00000296140 BIVM-ERCC5R4GMW8 1640 aa14.13□□□□□ -0.15
CCR1-201ENST00000296140 ERICH3Q5RHP9 1530 aa14.11□□□□□ -0.15
CCR1-201ENST00000296140 ITGAEP38570 1179 aa14.11□□□□□ -0.15
CCR1-201ENST00000296140 CUX1P39880 1505 aa14.11□□□□□ -0.15
CCR1-201ENST00000296140 CLSPNQ9HAW4 1339 aa14.07□□□□□ -0.16
CCR1-201ENST00000296140 RRBP1Q9P2E9 1410 aaKnown RBP14.07□□□□□ -0.16
CCR1-201ENST00000296140 ARHGAP35Q9NRY4 1499 aa14.05□□□□□ -0.16
CCR1-201ENST00000296140 KIF27Q86VH2 1401 aa14.03□□□□□ -0.16
CCR1-201ENST00000296140 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
CCR1-201ENST00000296140 KCNH8Q96L42 1107 aa14.01□□□□□ -0.17
CCR1-201ENST00000296140 SUPT16HQ9Y5B9 1047 aaKnown RBP14.01□□□□□ -0.17
CCR1-201ENST00000296140 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
CCR1-201ENST00000296140 CUX2O14529 1486 aa13.98□□□□□ -0.17
CCR1-201ENST00000296140 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
CCR1-201ENST00000296140 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
CCR1-201ENST00000296140 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
CCR1-201ENST00000296140 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
CCR1-201ENST00000296140 CFTRP13569 1480 aa13.95□□□□□ -0.18
CCR1-201ENST00000296140 IGF1RP08069 1367 aa13.91□□□□□ -0.18
CCR1-201ENST00000296140 SIN3AQ96ST3 1273 aa13.91□□□□□ -0.18
CCR1-201ENST00000296140 MYT1Q01538 1121 aa13.9□□□□□ -0.18
CCR1-201ENST00000296140 PHLDB1Q86UU1 1377 aa13.9□□□□□ -0.18
CCR1-201ENST00000296140 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms