RNA–Protein interactions for RNA: ENST00000291503.9

ATP13A1-201, Transcript of ATPase 13A1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATP13A1, Length 3,483 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-201ENST00000291503 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
ATP13A1-201ENST00000291503 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
ATP13A1-201ENST00000291503 FHOD3Q2V2M9 1422 aa15.72■□□□□ 0.11
ATP13A1-201ENST00000291503 NESP48681 1621 aa15.72■□□□□ 0.11
ATP13A1-201ENST00000291503 RAB3GAP2Q9H2M9 1393 aa15.71■□□□□ 0.11
ATP13A1-201ENST00000291503 CLSPNQ9HAW4 1339 aa15.71■□□□□ 0.11
ATP13A1-201ENST00000291503 DDX10Q13206 875 aaKnown RBP15.69■□□□□ 0.1
ATP13A1-201ENST00000291503 CC2D2AQ9P2K1 1620 aa15.68■□□□□ 0.1
ATP13A1-201ENST00000291503 CHIC2Q9UKJ5 165 aa15.68■□□□□ 0.1
ATP13A1-201ENST00000291503 MTUS2Q5JR59 1369 aa15.67■□□□□ 0.1
ATP13A1-201ENST00000291503 FHAD1B1AJZ9 1412 aa15.65■□□□□ 0.1
ATP13A1-201ENST00000291503 TRIM52Q96A61 297 aa15.65■□□□□ 0.1
ATP13A1-201ENST00000291503 PHLDB1Q86UU1 1377 aa15.64■□□□□ 0.09
ATP13A1-201ENST00000291503 RRBP1Q9P2E9 1410 aaKnown RBP15.63■□□□□ 0.09
ATP13A1-201ENST00000291503 SETD5Q9C0A6 1442 aa15.62■□□□□ 0.09
ATP13A1-201ENST00000291503 FBLN2P98095 1184 aa15.6■□□□□ 0.09
ATP13A1-201ENST00000291503 RRP7BPQ9NSQ0 103 aa15.6■□□□□ 0.09
ATP13A1-201ENST00000291503 PRKCSHP14314 528 aaPredicted RBP15.59■□□□□ 0.09
ATP13A1-201ENST00000291503 LRRC9Q6ZRR7 1453 aa15.57■□□□□ 0.08
ATP13A1-201ENST00000291503 POLA1P09884 1462 aaPredicted RBP15.57■□□□□ 0.08
ATP13A1-201ENST00000291503 KCNH8Q96L42 1107 aa15.56■□□□□ 0.08
ATP13A1-201ENST00000291503 TOPBP1Q92547 1522 aa15.54■□□□□ 0.08
ATP13A1-201ENST00000291503 TONSLQ96HA7 1378 aa15.53■□□□□ 0.08
ATP13A1-201ENST00000291503 BCANQ96GW7 911 aa15.53■□□□□ 0.08
ATP13A1-201ENST00000291503 CNGB1Q14028 1251 aaPredicted RBP15.52■□□□□ 0.08
ATP13A1-201ENST00000291503 TIAM1Q13009 1591 aa15.5■□□□□ 0.07
ATP13A1-201ENST00000291503 PDS5BQ9NTI5 1447 aa15.5■□□□□ 0.07
ATP13A1-201ENST00000291503 ANP32CO43423 234 aa15.48■□□□□ 0.07
ATP13A1-201ENST00000291503 FMN1Q68DA7 1419 aa15.48■□□□□ 0.07
ATP13A1-201ENST00000291503 ZNF777Q9ULD5 760 aaPredicted RBP15.46■□□□□ 0.07
ATP13A1-201ENST00000291503 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
ATP13A1-201ENST00000291503 ANP32EQ9BTT0 268 aa15.45■□□□□ 0.06
ATP13A1-201ENST00000291503 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
ATP13A1-201ENST00000291503 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
ATP13A1-201ENST00000291503 POLR3GLQ9BT43 218 aa15.44■□□□□ 0.06
ATP13A1-201ENST00000291503 ABCA10Q8WWZ4 1543 aa15.44■□□□□ 0.06
ATP13A1-201ENST00000291503 PPP1R15AO75807 674 aaPredicted RBP15.44■□□□□ 0.06
ATP13A1-201ENST00000291503 PCF11O94913 1555 aaKnown RBP15.42■□□□□ 0.06
ATP13A1-201ENST00000291503 FOXD1Q16676 465 aa15.42■□□□□ 0.06
ATP13A1-201ENST00000291503 CASKIN1Q8WXD9 1431 aa15.42■□□□□ 0.06
ATP13A1-201ENST00000291503 NEFLP07196 543 aa15.41■□□□□ 0.06
ATP13A1-201ENST00000291503 URB2Q14146 1524 aaKnown RBP15.4■□□□□ 0.06
ATP13A1-201ENST00000291503 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.067e-7■■■■□ 24.8
ATP13A1-201ENST00000291503 ZNF326Q5BKZ1 582 aaKnown RBP15.39■□□□□ 0.05
ATP13A1-201ENST00000291503 TSHZ2Q9NRE2 1034 aa15.38■□□□□ 0.05
ATP13A1-201ENST00000291503 FGD6Q6ZV73 1430 aa15.38■□□□□ 0.05
ATP13A1-201ENST00000291503 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
ATP13A1-201ENST00000291503 FYCO1Q9BQS8 1478 aa15.36■□□□□ 0.05
ATP13A1-201ENST00000291503 FKBP8Q14318 412 aa15.36■□□□□ 0.05
ATP13A1-201ENST00000291503 TIMELESSQ9UNS1 1208 aa15.34■□□□□ 0.05
ATP13A1-201ENST00000291503 CDK11AQ9UQ88 783 aaPredicted RBP15.34■□□□□ 0.05
ATP13A1-201ENST00000291503 MAP3K1Q13233 1512 aa15.33■□□□□ 0.04
ATP13A1-201ENST00000291503 MAPKBP1O60336 1514 aa15.32■□□□□ 0.04
ATP13A1-201ENST00000291503 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
ATP13A1-201ENST00000291503 CCDC18Q5T9S5 1454 aa15.32■□□□□ 0.04
ATP13A1-201ENST00000291503 NCOA2Q15596 1464 aa15.31■□□□□ 0.04
ATP13A1-201ENST00000291503 SLC4A1APQ9BWU0 796 aaKnown RBP15.3■□□□□ 0.04
ATP13A1-201ENST00000291503 EFCAB5A4FU69 1503 aa15.3■□□□□ 0.04
ATP13A1-201ENST00000291503 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
ATP13A1-201ENST00000291503 MYOM3Q5VTT5 1437 aa15.28■□□□□ 0.04
ATP13A1-201ENST00000291503 ZNF644Q9H582 1327 aaPredicted RBP15.28■□□□□ 0.04
ATP13A1-201ENST00000291503 HNRNPUQ00839 825 aaKnown RBP eCLIP15.27■□□□□ 0.04
ATP13A1-201ENST00000291503 MPHOSPH9Q99550 1183 aa15.27■□□□□ 0.04
ATP13A1-201ENST00000291503 PTPRKQ15262 1439 aa15.27■□□□□ 0.04
ATP13A1-201ENST00000291503 LAMC3Q9Y6N6 1575 aa15.26■□□□□ 0.03
ATP13A1-201ENST00000291503 CFDP1Q9UEE9 299 aaPredicted RBP15.26■□□□□ 0.03
ATP13A1-201ENST00000291503 EIF4G2P78344 907 aaKnown RBP eCLIP15.26■□□□□ 0.03
ATP13A1-201ENST00000291503 HSPA5P11021 654 aaKnown RBP15.25■□□□□ 0.03
ATP13A1-201ENST00000291503 CUL7Q14999 1698 aa15.23■□□□□ 0.03
ATP13A1-201ENST00000291503 L3MBTL2Q969R5 705 aa15.23■□□□□ 0.03
ATP13A1-201ENST00000291503 ERCC6Q03468 1493 aa15.22■□□□□ 0.03
ATP13A1-201ENST00000291503 FAM9BQ8IZU0 186 aa15.22■□□□□ 0.03
ATP13A1-201ENST00000291503 UACAQ9BZF9 1416 aa15.22■□□□□ 0.03
ATP13A1-201ENST00000291503 IRX6P78412 446 aaPredicted RBP15.21■□□□□ 0.03
ATP13A1-201ENST00000291503 NAIPQ13075 1403 aa15.21■□□□□ 0.02
ATP13A1-201ENST00000291503 HFM1A2PYH4 1435 aa15.2■□□□□ 0.02
ATP13A1-201ENST00000291503 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
ATP13A1-201ENST00000291503 SENP3-EIF4A1A0A087X0R7 540 aa15.19■□□□□ 0.02
ATP13A1-201ENST00000291503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.18■□□□□ 0.02
ATP13A1-201ENST00000291503 CDK13Q14004 1512 aaKnown RBP15.18■□□□□ 0.02
ATP13A1-201ENST00000291503 KDM2AQ9Y2K7 1162 aa15.17■□□□□ 0.02
ATP13A1-201ENST00000291503 PLEKHD1A6NEE1 506 aa15.16■□□□□ 0.02
ATP13A1-201ENST00000291503 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
ATP13A1-201ENST00000291503 CFAP43Q8NDM7 1665 aa15.15■□□□□ 0.02
ATP13A1-201ENST00000291503 CCER2I3L3R5 266 aa15.15■□□□□ 0.02
ATP13A1-201ENST00000291503 GRIN2BQ13224 1484 aa15.15■□□□□ 0.02
ATP13A1-201ENST00000291503 JPH4Q96JJ6 628 aa15.14■□□□□ 0.01
ATP13A1-201ENST00000291503 CTTNBP2Q8WZ74 1663 aa15.13■□□□□ 0.01
ATP13A1-201ENST00000291503 MRS2Q9HD23 443 aa15.13■□□□□ 0.01
ATP13A1-201ENST00000291503 TSPY4P0CV99 314 aa15.12■□□□□ 0.01
ATP13A1-201ENST00000291503 TSPY10P0CW01 314 aa15.12■□□□□ 0.01
ATP13A1-201ENST00000291503 EPRSP07814 1512 aaKnown RBP15.12■□□□□ 0.01
ATP13A1-201ENST00000291503 MRC2Q9UBG0 1479 aa15.12■□□□□ 0.01
ATP13A1-201ENST00000291503 EHBP1L1Q8N3D4 1523 aa15.11■□□□□ 0.01
ATP13A1-201ENST00000291503 KIF21AQ7Z4S6 1674 aa15.1■□□□□ 0.01
ATP13A1-201ENST00000291503 PKD2Q13563 968 aa15.1■□□□□ 0.01
ATP13A1-201ENST00000291503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.1■□□□□ 0.016e-7■■□□□ 13
ATP13A1-201ENST00000291503 WASHC2AQ641Q2 1341 aa15.09■□□□□ 0.01
ATP13A1-201ENST00000291503 SUPT6HQ7KZ85 1726 aaKnown RBP15.09■□□□□ 0.01
ATP13A1-201ENST00000291503 IQGAP2Q13576 1575 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms