RNA–Protein interactions for RNA: ENST00000272454.10

RGPD5-202, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2 BASIC

Gene RGPD5, Length 2,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-202ENST00000272454 PHLDB1Q86UU1 1377 aa22.06■■□□□ 1.12
RGPD5-202ENST00000272454 FKBP8Q14318 412 aa22.06■■□□□ 1.12
RGPD5-202ENST00000272454 IGF1RP08069 1367 aa22.05■■□□□ 1.12
RGPD5-202ENST00000272454 SETD5Q9C0A6 1442 aa22.04■■□□□ 1.12
RGPD5-202ENST00000272454 WDR97A6NE52 1622 aa22.04■■□□□ 1.12
RGPD5-202ENST00000272454 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
RGPD5-202ENST00000272454 CFTRP13569 1480 aa22■■□□□ 1.11
RGPD5-202ENST00000272454 TRIM52Q96A61 297 aa21.99■■□□□ 1.11
RGPD5-202ENST00000272454 TIAM1Q13009 1591 aa21.98■■□□□ 1.11
RGPD5-202ENST00000272454 CARMIL1Q5VZK9 1371 aa21.96■■□□□ 1.11
RGPD5-202ENST00000272454 LRRC9Q6ZRR7 1453 aa21.96■■□□□ 1.11
RGPD5-202ENST00000272454 PPP1R15AO75807 674 aaPredicted RBP21.95■■□□□ 1.1
RGPD5-202ENST00000272454 HMGXB3Q12766 1538 aa21.94■■□□□ 1.1
RGPD5-202ENST00000272454 FHOD3Q2V2M9 1422 aa21.84■■□□□ 1.09
RGPD5-202ENST00000272454 FGD5Q6ZNL6 1462 aa21.83■■□□□ 1.09
RGPD5-202ENST00000272454 ANP32CO43423 234 aa21.82■■□□□ 1.08
RGPD5-202ENST00000272454 MAP3K1Q13233 1512 aa21.81■■□□□ 1.08
RGPD5-202ENST00000272454 PCF11O94913 1555 aaKnown RBP21.8■■□□□ 1.08
RGPD5-202ENST00000272454 NEFLP07196 543 aa21.8■■□□□ 1.08
RGPD5-202ENST00000272454 FHAD1B1AJZ9 1412 aa21.77■■□□□ 1.08
RGPD5-202ENST00000272454 RBM19Q9Y4C8 960 aaKnown RBP21.75■■□□□ 1.07
RGPD5-202ENST00000272454 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
RGPD5-202ENST00000272454 CCER2I3L3R5 266 aa21.72■■□□□ 1.07
RGPD5-202ENST00000272454 TONSLQ96HA7 1378 aa21.72■■□□□ 1.07
RGPD5-202ENST00000272454 IRX6P78412 446 aaPredicted RBP21.71■■□□□ 1.07
RGPD5-202ENST00000272454 TIMELESSQ9UNS1 1208 aa21.7■■□□□ 1.06
RGPD5-202ENST00000272454 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
RGPD5-202ENST00000272454 CFAP43Q8NDM7 1665 aa21.68■■□□□ 1.06
RGPD5-202ENST00000272454 PTPRKQ15262 1439 aa21.67■■□□□ 1.06
RGPD5-202ENST00000272454 PRKCSHP14314 528 aaPredicted RBP21.66■■□□□ 1.06
RGPD5-202ENST00000272454 HNRNPUQ00839 825 aaKnown RBP eCLIP21.62■■□□□ 1.05
RGPD5-202ENST00000272454 FGD6Q6ZV73 1430 aa21.62■■□□□ 1.05
RGPD5-202ENST00000272454 CCDC18Q5T9S5 1454 aa21.62■■□□□ 1.05
RGPD5-202ENST00000272454 CASKIN1Q8WXD9 1431 aa21.6■■□□□ 1.05
RGPD5-202ENST00000272454 FYCO1Q9BQS8 1478 aa21.59■■□□□ 1.05
RGPD5-202ENST00000272454 MTUS2Q5JR59 1369 aa21.59■■□□□ 1.05
RGPD5-202ENST00000272454 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.04
RGPD5-202ENST00000272454 CHIC2Q9UKJ5 165 aa21.57■■□□□ 1.04
RGPD5-202ENST00000272454 PRDM2Q13029 1718 aa21.57■■□□□ 1.04
RGPD5-202ENST00000272454 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
RGPD5-202ENST00000272454 RRP7BPQ9NSQ0 103 aa21.56■■□□□ 1.04
RGPD5-202ENST00000272454 MSH5O43196 834 aa21.55■■□□□ 1.04
RGPD5-202ENST00000272454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.53■■□□□ 1.04
RGPD5-202ENST00000272454 UACAQ9BZF9 1416 aa21.52■■□□□ 1.04
RGPD5-202ENST00000272454 CCDC184Q52MB2 194 aa21.52■■□□□ 1.03
RGPD5-202ENST00000272454 HFM1A2PYH4 1435 aa21.51■■□□□ 1.03
RGPD5-202ENST00000272454 HSPA5P11021 654 aaKnown RBP21.51■■□□□ 1.03
RGPD5-202ENST00000272454 NAIPQ13075 1403 aa21.5■■□□□ 1.03
RGPD5-202ENST00000272454 WASHC2AQ641Q2 1341 aa21.5■■□□□ 1.03
RGPD5-202ENST00000272454 POLA1P09884 1462 aaPredicted RBP21.5■■□□□ 1.03
RGPD5-202ENST00000272454 PTPN23Q9H3S7 1636 aa21.47■■□□□ 1.03
RGPD5-202ENST00000272454 SNAPC4Q5SXM2 1469 aa21.47■■□□□ 1.03
RGPD5-202ENST00000272454 FMN1Q68DA7 1419 aa21.46■■□□□ 1.03
RGPD5-202ENST00000272454 EFCAB5A4FU69 1503 aa21.46■■□□□ 1.03
RGPD5-202ENST00000272454 FOXD1Q16676 465 aa21.45■■□□□ 1.03
RGPD5-202ENST00000272454 ERICH6Q7L0X2 663 aa21.45■■□□□ 1.03
RGPD5-202ENST00000272454 NESP48681 1621 aa21.45■■□□□ 1.02
RGPD5-202ENST00000272454 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
RGPD5-202ENST00000272454 NCOA2Q15596 1464 aa21.45■■□□□ 1.02
RGPD5-202ENST00000272454 ARID3CA6NKF2 412 aa21.45■■□□□ 1.02
RGPD5-202ENST00000272454 KDM5BQ9UGL1 1544 aa21.44■■□□□ 1.02
RGPD5-202ENST00000272454 TDRD9Q8NDG6 1382 aaKnown RBP21.43■■□□□ 1.02
RGPD5-202ENST00000272454 TOPBP1Q92547 1522 aa21.43■■□□□ 1.02
RGPD5-202ENST00000272454 MYOM3Q5VTT5 1437 aa21.41■■□□□ 1.02
RGPD5-202ENST00000272454 C11orf95C9JLR9 678 aaPredicted RBP21.41■■□□□ 1.02
RGPD5-202ENST00000272454 FAM9BQ8IZU0 186 aa21.39■■□□□ 1.02
RGPD5-202ENST00000272454 DNMBPQ6XZF7 1577 aa21.39■■□□□ 1.01
RGPD5-202ENST00000272454 CDK11AQ9UQ88 783 aaPredicted RBP21.38■■□□□ 1.01
RGPD5-202ENST00000272454 CNGB1Q14028 1251 aaPredicted RBP21.37■■□□□ 1.01
RGPD5-202ENST00000272454 LRRIQ1Q96JM4 1722 aa21.36■■□□□ 1.01
RGPD5-202ENST00000272454 EIF4G2P78344 907 aaKnown RBP eCLIP21.35■■□□□ 1.01
RGPD5-202ENST00000272454 CTTNBP2Q8WZ74 1663 aa21.35■■□□□ 1.01
RGPD5-202ENST00000272454 L3MBTL2Q969R5 705 aa21.35■■□□□ 1.01
RGPD5-202ENST00000272454 DENND4BO75064 1496 aaPredicted RBP21.34■■□□□ 1.01
RGPD5-202ENST00000272454 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1
RGPD5-202ENST00000272454 GRIN2BQ13224 1484 aa21.32■■□□□ 1
RGPD5-202ENST00000272454 B4GALNT3Q6L9W6 998 aa21.31■■□□□ 1
RGPD5-202ENST00000272454 MAGI3Q5TCQ9 1506 aa21.31■■□□□ 1
RGPD5-202ENST00000272454 MPHOSPH9Q99550 1183 aa21.3■■□□□ 1
RGPD5-202ENST00000272454 CUL7Q14999 1698 aa21.3■■□□□ 1
RGPD5-202ENST00000272454 KDM6BO15054 1643 aa21.3■■□□□ 1
RGPD5-202ENST00000272454 SENP3-EIF4A1A0A087X0R7 540 aa21.29■■□□□ 1
RGPD5-202ENST00000272454 MRS2Q9HD23 443 aa21.29■■□□□ 1
RGPD5-202ENST00000272454 PRKRIP1Q9H875 184 aaPredicted RBP21.27■■□□□ 1
RGPD5-202ENST00000272454 NBPF8Q3BBV2 869 aa21.26■□□□□ 0.99
RGPD5-202ENST00000272454 CNTLNQ9NXG0 1405 aa21.26■□□□□ 0.99
RGPD5-202ENST00000272454 FANCIQ9NVI1 1328 aa21.25■□□□□ 0.99
RGPD5-202ENST00000272454 PPP4R2Q9NY27 417 aa21.25■□□□□ 0.99
RGPD5-202ENST00000272454 SUPT6HQ7KZ85 1726 aaKnown RBP21.24■□□□□ 0.99
RGPD5-202ENST00000272454 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
RGPD5-202ENST00000272454 SAMD9Q5K651 1589 aa21.24■□□□□ 0.99
RGPD5-202ENST00000272454 UGGT2Q9NYU1 1516 aa21.23■□□□□ 0.99
RGPD5-202ENST00000272454 CCDC7Q96M83 1385 aa21.22■□□□□ 0.99
RGPD5-202ENST00000272454 EHBP1L1Q8N3D4 1523 aa21.22■□□□□ 0.99
RGPD5-202ENST00000272454 DEKP35659 375 aaKnown RBP21.22■□□□□ 0.99
RGPD5-202ENST00000272454 GAPVD1Q14C86 1478 aa21.21■□□□□ 0.99
RGPD5-202ENST00000272454 POLR3GLQ9BT43 218 aa21.19■□□□□ 0.98
RGPD5-202ENST00000272454 DNAJC5BQ9UF47 199 aa21.16■□□□□ 0.98
RGPD5-202ENST00000272454 NCOA1Q15788 1441 aa21.16■□□□□ 0.98
RGPD5-202ENST00000272454 KIF7Q2M1P5 1343 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms