RNA–Protein interactions for RNA: ENST00000264637.8

THRA-201, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene THRA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-201ENST00000264637 P3H3Q8IVL6 736 aa32.74■■■□□ 2.83
THRA-201ENST00000264637 SIN3AQ96ST3 1273 aa32.74■■■□□ 2.83
THRA-201ENST00000264637 MAP3K1Q13233 1512 aa32.73■■■□□ 2.83
THRA-201ENST00000264637 FGD5Q6ZNL6 1462 aa32.72■■■□□ 2.83
THRA-201ENST00000264637 PRDM2Q13029 1718 aa32.71■■■□□ 2.83
THRA-201ENST00000264637 ATP1B4Q9UN42 357 aaPredicted RBP32.67■■■□□ 2.82
THRA-201ENST00000264637 CADPSQ9ULU8 1353 aa32.67■■■□□ 2.82
THRA-201ENST00000264637 WDR97A6NE52 1622 aa32.65■■■□□ 2.82
THRA-201ENST00000264637 DDX10Q13206 875 aaKnown RBP32.62■■■□□ 2.81
THRA-201ENST00000264637 PCF11O94913 1555 aaKnown RBP32.58■■■□□ 2.81
THRA-201ENST00000264637 FHAD1B1AJZ9 1412 aa32.57■■■□□ 2.8
THRA-201ENST00000264637 HIRIP3Q9BW71 556 aaPredicted RBP32.52■■■□□ 2.8
THRA-201ENST00000264637 FHOD3Q2V2M9 1422 aa32.52■■■□□ 2.8
THRA-201ENST00000264637 CFAP43Q8NDM7 1665 aa32.51■■■□□ 2.8
THRA-201ENST00000264637 TSHZ2Q9NRE2 1034 aa32.5■■■□□ 2.79
THRA-201ENST00000264637 PPP1R15AO75807 674 aaPredicted RBP32.44■■■□□ 2.78
THRA-201ENST00000264637 BCANQ96GW7 911 aa32.42■■■□□ 2.78
THRA-201ENST00000264637 RAD54L2Q9Y4B4 1467 aa32.42■■■□□ 2.78
THRA-201ENST00000264637 FANCD2Q9BXW9 1451 aa32.38■■■□□ 2.77
THRA-201ENST00000264637 TIMELESSQ9UNS1 1208 aa32.34■■■□□ 2.77
THRA-201ENST00000264637 FYCO1Q9BQS8 1478 aa32.34■■■□□ 2.77
THRA-201ENST00000264637 CASKIN1Q8WXD9 1431 aa32.32■■■□□ 2.76
THRA-201ENST00000264637 FKBP8Q14318 412 aa32.32■■■□□ 2.76
THRA-201ENST00000264637 ABCA10Q8WWZ4 1543 aa32.26■■■□□ 2.75
THRA-201ENST00000264637 POLA1P09884 1462 aaPredicted RBP32.26■■■□□ 2.75
THRA-201ENST00000264637 EFCAB5A4FU69 1503 aa32.25■■■□□ 2.75
THRA-201ENST00000264637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.24■■■□□ 2.75
THRA-201ENST00000264637 TRIM52Q96A61 297 aa32.24■■■□□ 2.75
THRA-201ENST00000264637 FGD6Q6ZV73 1430 aa32.23■■■□□ 2.75
THRA-201ENST00000264637 DNMBPQ6XZF7 1577 aa32.22■■■□□ 2.75
THRA-201ENST00000264637 AQRO60306 1485 aaKnown RBP eCLIP32.22■■■□□ 2.752e-6■■■■□ 25.7
THRA-201ENST00000264637 TOPBP1Q92547 1522 aa32.2■■■□□ 2.75
THRA-201ENST00000264637 CC2D2AQ9P2K1 1620 aa32.2■■■□□ 2.75
THRA-201ENST00000264637 ANP32CO43423 234 aa32.2■■■□□ 2.74
THRA-201ENST00000264637 PTPRKQ15262 1439 aa32.19■■■□□ 2.74
THRA-201ENST00000264637 TONSLQ96HA7 1378 aa32.17■■■□□ 2.74
THRA-201ENST00000264637 CCDC18Q5T9S5 1454 aa32.16■■■□□ 2.74
THRA-201ENST00000264637 CCER2I3L3R5 266 aa32.16■■■□□ 2.74
THRA-201ENST00000264637 NESP48681 1621 aa32.14■■■□□ 2.74
THRA-201ENST00000264637 CTTNBP2Q8WZ74 1663 aa32.14■■■□□ 2.74
THRA-201ENST00000264637 MTUS2Q5JR59 1369 aa32.14■■■□□ 2.74
THRA-201ENST00000264637 SNAPC4Q5SXM2 1469 aa32.13■■■□□ 2.73
THRA-201ENST00000264637 FMN1Q68DA7 1419 aa32.13■■■□□ 2.73
THRA-201ENST00000264637 CUL7Q14999 1698 aa32.11■■■□□ 2.73
THRA-201ENST00000264637 HFM1A2PYH4 1435 aa32.08■■■□□ 2.73
THRA-201ENST00000264637 UACAQ9BZF9 1416 aa32.06■■■□□ 2.72
THRA-201ENST00000264637 PTPN23Q9H3S7 1636 aa32.04■■■□□ 2.72
THRA-201ENST00000264637 NEFLP07196 543 aa32.03■■■□□ 2.72
THRA-201ENST00000264637 LRRIQ1Q96JM4 1722 aa32.02■■■□□ 2.72
THRA-201ENST00000264637 NAIPQ13075 1403 aa32.01■■■□□ 2.71
THRA-201ENST00000264637 ANP32EQ9BTT0 268 aa32■■■□□ 2.71
THRA-201ENST00000264637 NCOA2Q15596 1464 aa31.99■■■□□ 2.71
THRA-201ENST00000264637 TDRD9Q8NDG6 1382 aaKnown RBP31.99■■■□□ 2.71
THRA-201ENST00000264637 MYOM3Q5VTT5 1437 aa31.96■■■□□ 2.71
THRA-201ENST00000264637 SAMD9Q5K651 1589 aa31.92■■■□□ 2.7
THRA-201ENST00000264637 GRIN2BQ13224 1484 aa31.92■■■□□ 2.7
THRA-201ENST00000264637 URB2Q14146 1524 aaKnown RBP31.91■■■□□ 2.7
THRA-201ENST00000264637 KDM5BQ9UGL1 1544 aa31.9■■■□□ 2.7
THRA-201ENST00000264637 RRP7BPQ9NSQ0 103 aa31.89■■■□□ 2.7
THRA-201ENST00000264637 CHIC2Q9UKJ5 165 aa31.88■■■□□ 2.69
THRA-201ENST00000264637 RBM19Q9Y4C8 960 aaKnown RBP31.84■■■□□ 2.69
THRA-201ENST00000264637 SUPT6HQ7KZ85 1726 aaKnown RBP31.84■■■□□ 2.69
THRA-201ENST00000264637 GAPVD1Q14C86 1478 aa31.82■■■□□ 2.68
THRA-201ENST00000264637 MAGI3Q5TCQ9 1506 aa31.81■■■□□ 2.68
THRA-201ENST00000264637 ABCA5Q8WWZ7 1642 aa31.81■■■□□ 2.68
THRA-201ENST00000264637 EHBP1L1Q8N3D4 1523 aa31.79■■■□□ 2.68
THRA-201ENST00000264637 HNRNPUQ00839 825 aaKnown RBP eCLIP31.79■■■□□ 2.68
THRA-201ENST00000264637 WASHC2AQ641Q2 1341 aa31.78■■■□□ 2.68
THRA-201ENST00000264637 HSPA5P11021 654 aaKnown RBP31.78■■■□□ 2.68
THRA-201ENST00000264637 UGGT2Q9NYU1 1516 aa31.78■■■□□ 2.68
THRA-201ENST00000264637 DENND4BO75064 1496 aaPredicted RBP31.75■■■□□ 2.67
THRA-201ENST00000264637 THOC2Q8NI27 1593 aaKnown RBP31.74■■■□□ 2.67
THRA-201ENST00000264637 ARHGEF11O15085 1522 aa31.72■■■□□ 2.67
THRA-201ENST00000264637 IRX6P78412 446 aaPredicted RBP31.71■■■□□ 2.67
THRA-201ENST00000264637 KDM6BO15054 1643 aa31.7■■■□□ 2.66
THRA-201ENST00000264637 ARID3CA6NKF2 412 aa31.67■■■□□ 2.66
THRA-201ENST00000264637 FOXD1Q16676 465 aa31.67■■■□□ 2.66
THRA-201ENST00000264637 LAMC3Q9Y6N6 1575 aa31.66■■■□□ 2.66
THRA-201ENST00000264637 CCDC184Q52MB2 194 aa31.64■■■□□ 2.65
THRA-201ENST00000264637 TCOF1Q13428 1488 aaKnown RBP31.63■■■□□ 2.65
THRA-201ENST00000264637 EIF4G2P78344 907 aaKnown RBP eCLIP31.62■■■□□ 2.65
THRA-201ENST00000264637 MPHOSPH9Q99550 1183 aa31.62■■■□□ 2.65
THRA-201ENST00000264637 GCC2Q8IWJ2 1684 aa31.61■■■□□ 2.65
THRA-201ENST00000264637 L3MBTL2Q969R5 705 aa31.6■■■□□ 2.65
THRA-201ENST00000264637 HECW1Q76N89 1606 aa31.6■■■□□ 2.65
THRA-201ENST00000264637 C11orf95C9JLR9 678 aaPredicted RBP31.59■■■□□ 2.65
THRA-201ENST00000264637 DNAJC5BQ9UF47 199 aa31.58■■■□□ 2.65
THRA-201ENST00000264637 CDK13Q14004 1512 aaKnown RBP31.56■■■□□ 2.64
THRA-201ENST00000264637 EPRSP07814 1512 aaKnown RBP31.55■■■□□ 2.64
THRA-201ENST00000264637 BCL11AQ9H165 835 aa31.53■■■□□ 2.64
THRA-201ENST00000264637 KIF21AQ7Z4S6 1674 aa31.53■■■□□ 2.64
THRA-201ENST00000264637 CNTLNQ9NXG0 1405 aa31.52■■■□□ 2.64
THRA-201ENST00000264637 PDS5BQ9NTI5 1447 aa31.51■■■□□ 2.63
THRA-201ENST00000264637 AKNAQ7Z591 1439 aa31.5■■■□□ 2.63
THRA-201ENST00000264637 TARBP1Q13395 1621 aaKnown RBP31.47■■■□□ 2.63
THRA-201ENST00000264637 MSH5O43196 834 aa31.47■■■□□ 2.63
THRA-201ENST00000264637 NBPF8Q3BBV2 869 aa31.46■■■□□ 2.63
THRA-201ENST00000264637 MIA2Q96PC5 1412 aa31.45■■■□□ 2.63
THRA-201ENST00000264637 FAM9BQ8IZU0 186 aa31.45■■■□□ 2.62
THRA-201ENST00000264637 CCDC7Q96M83 1385 aa31.45■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms