RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 FHAD1B1AJZ9 1412 aa33.44■■■□□ 2.94
PREB-201ENST00000260643 CFAP43Q8NDM7 1665 aa33.43■■■□□ 2.94
PREB-201ENST00000260643 PHLDB1Q86UU1 1377 aa33.43■■■□□ 2.94
PREB-201ENST00000260643 TSHZ2Q9NRE2 1034 aa33.43■■■□□ 2.94
PREB-201ENST00000260643 WDR97A6NE52 1622 aa33.38■■■□□ 2.93
PREB-201ENST00000260643 KCNH8Q96L42 1107 aa33.34■■■□□ 2.93
PREB-201ENST00000260643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.33■■■□□ 2.93
PREB-201ENST00000260643 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
PREB-201ENST00000260643 CADPSQ9ULU8 1353 aa33.29■■■□□ 2.92
PREB-201ENST00000260643 PPP1R15AO75807 674 aaPredicted RBP33.28■■■□□ 2.92
PREB-201ENST00000260643 PCF11O94913 1555 aaKnown RBP33.28■■■□□ 2.92
PREB-201ENST00000260643 SIN3AQ96ST3 1273 aa33.23■■■□□ 2.91
PREB-201ENST00000260643 FYCO1Q9BQS8 1478 aa33.21■■■□□ 2.91
PREB-201ENST00000260643 AQRO60306 1485 aaKnown RBP eCLIP33.21■■■□□ 2.916e-8■■■■■ 45.6
PREB-201ENST00000260643 DDX10Q13206 875 aaKnown RBP33.2■■■□□ 2.91
PREB-201ENST00000260643 CCER2I3L3R5 266 aa33.19■■■□□ 2.9
PREB-201ENST00000260643 FAM50AQ14320 339 aaKnown RBP33.19■■■□□ 2.9
PREB-201ENST00000260643 EFCAB5A4FU69 1503 aa33.18■■■□□ 2.9
PREB-201ENST00000260643 CASKIN1Q8WXD9 1431 aa33.14■■■□□ 2.9
PREB-201ENST00000260643 ANP32EQ9BTT0 268 aa33.08■■■□□ 2.89
PREB-201ENST00000260643 FKBP8Q14318 412 aa33.04■■■□□ 2.88
PREB-201ENST00000260643 FHOD3Q2V2M9 1422 aa33.04■■■□□ 2.88
PREB-201ENST00000260643 ABCA10Q8WWZ4 1543 aa33.02■■■□□ 2.88
PREB-201ENST00000260643 CC2D2AQ9P2K1 1620 aa33.01■■■□□ 2.87
PREB-201ENST00000260643 FGD6Q6ZV73 1430 aa32.99■■■□□ 2.87
PREB-201ENST00000260643 ANP32CO43423 234 aa32.98■■■□□ 2.87
PREB-201ENST00000260643 CUL7Q14999 1698 aa32.97■■■□□ 2.87
PREB-201ENST00000260643 DNMBPQ6XZF7 1577 aa32.96■■■□□ 2.87
PREB-201ENST00000260643 P3H3Q8IVL6 736 aa32.94■■■□□ 2.86
PREB-201ENST00000260643 FANCD2Q9BXW9 1451 aa32.94■■■□□ 2.86
PREB-201ENST00000260643 HFM1A2PYH4 1435 aa32.94■■■□□ 2.86
PREB-201ENST00000260643 FMN1Q68DA7 1419 aa32.94■■■□□ 2.86
PREB-201ENST00000260643 UACAQ9BZF9 1416 aa32.93■■■□□ 2.86
PREB-201ENST00000260643 CTTNBP2Q8WZ74 1663 aa32.92■■■□□ 2.86
PREB-201ENST00000260643 CCDC18Q5T9S5 1454 aa32.91■■■□□ 2.86
PREB-201ENST00000260643 NEFLP07196 543 aa32.91■■■□□ 2.86
PREB-201ENST00000260643 BCANQ96GW7 911 aa32.9■■■□□ 2.86
PREB-201ENST00000260643 SNAPC4Q5SXM2 1469 aa32.9■■■□□ 2.86
PREB-201ENST00000260643 TONSLQ96HA7 1378 aa32.89■■■□□ 2.86
PREB-201ENST00000260643 ATP1B4Q9UN42 357 aaPredicted RBP32.86■■■□□ 2.85
PREB-201ENST00000260643 PTPN23Q9H3S7 1636 aa32.85■■■□□ 2.85
PREB-201ENST00000260643 POLA1P09884 1462 aaPredicted RBP32.85■■■□□ 2.85
PREB-201ENST00000260643 RAD54L2Q9Y4B4 1467 aa32.84■■■□□ 2.85
PREB-201ENST00000260643 TOPBP1Q92547 1522 aa32.82■■■□□ 2.84
PREB-201ENST00000260643 HIRIP3Q9BW71 556 aaPredicted RBP32.82■■■□□ 2.84
PREB-201ENST00000260643 PTPRKQ15262 1439 aa32.81■■■□□ 2.84
PREB-201ENST00000260643 TRIM52Q96A61 297 aa32.77■■■□□ 2.84
PREB-201ENST00000260643 NAIPQ13075 1403 aa32.77■■■□□ 2.84
PREB-201ENST00000260643 KDM5BQ9UGL1 1544 aa32.76■■■□□ 2.84
PREB-201ENST00000260643 SAMD9Q5K651 1589 aa32.76■■■□□ 2.83
PREB-201ENST00000260643 THOC2Q8NI27 1593 aaKnown RBP32.75■■■□□ 2.83
PREB-201ENST00000260643 MTUS2Q5JR59 1369 aa32.75■■■□□ 2.83
PREB-201ENST00000260643 MYOM3Q5VTT5 1437 aa32.73■■■□□ 2.83
PREB-201ENST00000260643 RBM19Q9Y4C8 960 aaKnown RBP32.72■■■□□ 2.83
PREB-201ENST00000260643 GRIN2BQ13224 1484 aa32.69■■■□□ 2.82
PREB-201ENST00000260643 NCOA2Q15596 1464 aa32.69■■■□□ 2.82
PREB-201ENST00000260643 LRRIQ1Q96JM4 1722 aa32.66■■■□□ 2.82
PREB-201ENST00000260643 EHBP1L1Q8N3D4 1523 aa32.64■■■□□ 2.82
PREB-201ENST00000260643 SUPT6HQ7KZ85 1726 aaKnown RBP32.64■■■□□ 2.82
PREB-201ENST00000260643 ARHGEF11O15085 1522 aa32.63■■■□□ 2.81
PREB-201ENST00000260643 UGGT2Q9NYU1 1516 aa32.58■■■□□ 2.81
PREB-201ENST00000260643 ABCA5Q8WWZ7 1642 aa32.56■■■□□ 2.8
PREB-201ENST00000260643 TCOF1Q13428 1488 aaKnown RBP32.55■■■□□ 2.8
PREB-201ENST00000260643 AKNAQ7Z591 1439 aa32.55■■■□□ 2.8
PREB-201ENST00000260643 KIF21AQ7Z4S6 1674 aa32.53■■■□□ 2.8
PREB-201ENST00000260643 HECW1Q76N89 1606 aa32.52■■■□□ 2.8
PREB-201ENST00000260643 GCC2Q8IWJ2 1684 aa32.52■■■□□ 2.8
PREB-201ENST00000260643 DENND4BO75064 1496 aaPredicted RBP32.48■■■□□ 2.79
PREB-201ENST00000260643 ERICH6BQ5W0A0 696 aa32.47■■■□□ 2.79
PREB-201ENST00000260643 WASHC2AQ641Q2 1341 aa32.47■■■□□ 2.79
PREB-201ENST00000260643 HNRNPUQ00839 825 aaKnown RBP eCLIP32.45■■■□□ 2.78
PREB-201ENST00000260643 DNAJC5BQ9UF47 199 aa32.45■■■□□ 2.78
PREB-201ENST00000260643 URB2Q14146 1524 aaKnown RBP32.45■■■□□ 2.78
PREB-201ENST00000260643 NESP48681 1621 aa32.43■■■□□ 2.78
PREB-201ENST00000260643 MAGI3Q5TCQ9 1506 aa32.43■■■□□ 2.78
PREB-201ENST00000260643 HSPA5P11021 654 aaKnown RBP32.42■■■□□ 2.78
PREB-201ENST00000260643 GAPVD1Q14C86 1478 aa32.42■■■□□ 2.78
PREB-201ENST00000260643 FANCIQ9NVI1 1328 aa32.38■■■□□ 2.77
PREB-201ENST00000260643 LAMC3Q9Y6N6 1575 aa32.38■■■□□ 2.77
PREB-201ENST00000260643 CNTLNQ9NXG0 1405 aa32.38■■■□□ 2.77
PREB-201ENST00000260643 EIF4G2P78344 907 aaKnown RBP eCLIP32.36■■■□□ 2.77
PREB-201ENST00000260643 MIA2Q96PC5 1412 aa32.34■■■□□ 2.77
PREB-201ENST00000260643 TDRD9Q8NDG6 1382 aaKnown RBP32.34■■■□□ 2.77
PREB-201ENST00000260643 NCOA1Q15788 1441 aa32.3■■■□□ 2.76
PREB-201ENST00000260643 CDK11AQ9UQ88 783 aaPredicted RBP32.3■■■□□ 2.76
PREB-201ENST00000260643 RRP7BPQ9NSQ0 103 aa32.29■■■□□ 2.76
PREB-201ENST00000260643 MSH5O43196 834 aa32.29■■■□□ 2.76
PREB-201ENST00000260643 KDM6BO15054 1643 aa32.28■■■□□ 2.76
PREB-201ENST00000260643 MPHOSPH9Q99550 1183 aa32.24■■■□□ 2.75
PREB-201ENST00000260643 CCDC7Q96M83 1385 aa32.23■■■□□ 2.75
PREB-201ENST00000260643 EPRSP07814 1512 aaKnown RBP32.22■■■□□ 2.75
PREB-201ENST00000260643 PPP4R2Q9NY27 417 aa32.22■■■□□ 2.75
PREB-201ENST00000260643 PRKRIP1Q9H875 184 aaPredicted RBP32.2■■■□□ 2.75
PREB-201ENST00000260643 L3MBTL2Q969R5 705 aa32.19■■■□□ 2.74
PREB-201ENST00000260643 BCL11AQ9H165 835 aa32.19■■■□□ 2.74
PREB-201ENST00000260643 CHIC2Q9UKJ5 165 aa32.19■■■□□ 2.74
PREB-201ENST00000260643 ROCK1Q13464 1354 aa32.17■■■□□ 2.74
PREB-201ENST00000260643 RPRD2Q5VT52 1461 aaKnown RBP32.17■■■□□ 2.74
PREB-201ENST00000260643 ZBED9Q6R2W3 1325 aa32.15■■■□□ 2.74
PREB-201ENST00000260643 CCDC184Q52MB2 194 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms