RNA–Protein interactions for RNA: ENST00000257248.2

GIF-201, Transcript of gastric intrinsic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIF, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIF-201ENST00000257248 TOPBP1Q92547 1522 aa11.44□□□□□ -0.58
GIF-201ENST00000257248 CUX1P39880 1505 aa11.41□□□□□ -0.58
GIF-201ENST00000257248 WRNQ14191 1432 aaPredicted RBP eCLIP11.39□□□□□ -0.59
GIF-201ENST00000257248 POLA2Q14181 598 aa11.38□□□□□ -0.59
GIF-201ENST00000257248 TOP2BQ02880 1626 aa11.37□□□□□ -0.59
GIF-201ENST00000257248 BIVM-ERCC5R4GMW8 1640 aa11.37□□□□□ -0.59
GIF-201ENST00000257248 SYNJ1O43426 1573 aa11.36□□□□□ -0.59
GIF-201ENST00000257248 POLA1P09884 1462 aaPredicted RBP11.35□□□□□ -0.59
GIF-201ENST00000257248 FGD5Q6ZNL6 1462 aa11.33□□□□□ -0.6
GIF-201ENST00000257248 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
GIF-201ENST00000257248 TARBP1Q13395 1621 aaKnown RBP11.32□□□□□ -0.6
GIF-201ENST00000257248 ATF5Q9Y2D1 282 aaPredicted RBP11.29□□□□□ -0.6
GIF-201ENST00000257248 WDR97A6NE52 1622 aa11.27□□□□□ -0.61
GIF-201ENST00000257248 ABCA10Q8WWZ4 1543 aa11.27□□□□□ -0.61
GIF-201ENST00000257248 RAD54L2Q9Y4B4 1467 aa11.27□□□□□ -0.61
GIF-201ENST00000257248 SOGA1O94964 1423 aa11.27□□□□□ -0.61
GIF-201ENST00000257248 ZNF608Q9ULD9 1512 aaPredicted RBP11.24□□□□□ -0.61
GIF-201ENST00000257248 EIF4G3O43432 1585 aaKnown RBP11.21□□□□□ -0.61
GIF-201ENST00000257248 CHRDL2Q6WN34 429 aa11.21□□□□□ -0.61
GIF-201ENST00000257248 ABCA5Q8WWZ7 1642 aa11.21□□□□□ -0.61
GIF-201ENST00000257248 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
GIF-201ENST00000257248 AQRO60306 1485 aaKnown RBP eCLIP11.18□□□□□ -0.62
GIF-201ENST00000257248 TDRD9Q8NDG6 1382 aaKnown RBP11.17□□□□□ -0.62
GIF-201ENST00000257248 GAPVD1Q14C86 1478 aa11.16□□□□□ -0.62
GIF-201ENST00000257248 TRIM41Q8WV44 630 aa11.15□□□□□ -0.62
GIF-201ENST00000257248 AKT1S1Q96B36 256 aa11.14□□□□□ -0.63
GIF-201ENST00000257248 GRIN2BQ13224 1484 aa11.14□□□□□ -0.63
GIF-201ENST00000257248 KIF27Q86VH2 1401 aa11.13□□□□□ -0.63
GIF-201ENST00000257248 ERICH3Q5RHP9 1530 aa11.13□□□□□ -0.63
GIF-201ENST00000257248 PBRM1Q86U86 1689 aa11.12□□□□□ -0.63
GIF-201ENST00000257248 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
GIF-201ENST00000257248 SNAPC4Q5SXM2 1469 aa11.09□□□□□ -0.63
GIF-201ENST00000257248 ADAMTS12P58397 1594 aa11.08□□□□□ -0.64
GIF-201ENST00000257248 IGF1RP08069 1367 aa11.08□□□□□ -0.64
GIF-201ENST00000257248 RUSC2Q8N2Y8 1516 aa11.07□□□□□ -0.64
GIF-201ENST00000257248 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
GIF-201ENST00000257248 EEA1Q15075 1411 aa11.06□□□□□ -0.64
GIF-201ENST00000257248 FHAD1B1AJZ9 1412 aa11.05□□□□□ -0.64
GIF-201ENST00000257248 CUL7Q14999 1698 aa11.05□□□□□ -0.64
GIF-201ENST00000257248 GRIN2AQ12879 1464 aa11.01□□□□□ -0.65
GIF-201ENST00000257248 CHD1O14646 1710 aa11.01□□□□□ -0.65
GIF-201ENST00000257248 PRXQ9BXM0 1461 aa11□□□□□ -0.65
GIF-201ENST00000257248 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
GIF-201ENST00000257248 NUP160Q12769 1436 aa10.99□□□□□ -0.65
GIF-201ENST00000257248 CARMIL1Q5VZK9 1371 aa10.99□□□□□ -0.65
GIF-201ENST00000257248 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
GIF-201ENST00000257248 FBXO3Q9UK99 471 aa10.98□□□□□ -0.65
GIF-201ENST00000257248 RAPGEF2Q9Y4G8 1499 aa10.96□□□□□ -0.65
GIF-201ENST00000257248 CHMP7Q8WUX9 453 aaPredicted RBP10.96□□□□□ -0.65
GIF-201ENST00000257248 CLASP1Q7Z460 1538 aa10.96□□□□□ -0.65
GIF-201ENST00000257248 CEP170Q5SW79 1584 aa10.95□□□□□ -0.66
GIF-201ENST00000257248 KIF21BO75037 1637 aa10.94□□□□□ -0.66
GIF-201ENST00000257248 FBLN2P98095 1184 aa10.92□□□□□ -0.66
GIF-201ENST00000257248 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
GIF-201ENST00000257248 KIAA0586Q9BVV6 1533 aa10.9□□□□□ -0.66
GIF-201ENST00000257248 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
GIF-201ENST00000257248 SP7Q8TDD2 431 aaPredicted RBP10.89□□□□□ -0.67
GIF-201ENST00000257248 SHROOM2Q13796 1616 aa10.88□□□□□ -0.67
GIF-201ENST00000257248 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
GIF-201ENST00000257248 FAM9AQ8IZU1 332 aaPredicted RBP10.86□□□□□ -0.67
GIF-201ENST00000257248 DNAJC5Q9H3Z4 198 aa10.86□□□□□ -0.67
GIF-201ENST00000257248 IQGAP2Q13576 1575 aa10.85□□□□□ -0.67
GIF-201ENST00000257248 GOLGA3Q08378 1498 aa10.85□□□□□ -0.67
GIF-201ENST00000257248 FXR2P51116 673 aaKnown RBP eCLIP10.84□□□□□ -0.67
GIF-201ENST00000257248 CTTNBP2Q8WZ74 1663 aa10.83□□□□□ -0.68
GIF-201ENST00000257248 MKRN4PQ13434 485 aaPredicted RBP10.83□□□□□ -0.68
GIF-201ENST00000257248 PROM2Q8N271 834 aa10.83□□□□□ -0.68
GIF-201ENST00000257248 UGGT2Q9NYU1 1516 aa10.82□□□□□ -0.68
GIF-201ENST00000257248 SPDYE2BA6NHP3 402 aa10.82□□□□□ -0.68
GIF-201ENST00000257248 SPDYE6P0CI01 402 aa10.82□□□□□ -0.68
GIF-201ENST00000257248 SPDYE2Q495Y8 402 aa10.82□□□□□ -0.68
GIF-201ENST00000257248 ARHGEF11O15085 1522 aa10.81□□□□□ -0.68
GIF-201ENST00000257248 JPH4Q96JJ6 628 aa10.79□□□□□ -0.68
GIF-201ENST00000257248 PRG4Q92954 1404 aaPredicted RBP10.78□□□□□ -0.68
GIF-201ENST00000257248 DISP1Q96F81 1524 aa10.78□□□□□ -0.68
GIF-201ENST00000257248 RIMBP3CA6NJZ7 1639 aa10.78□□□□□ -0.68
GIF-201ENST00000257248 RIMBP3BA6NNM3 1639 aa10.78□□□□□ -0.68
GIF-201ENST00000257248 RIMBP3Q9UFD9 1639 aa10.78□□□□□ -0.68
GIF-201ENST00000257248 ERCC6L2Q5T890 1561 aa10.77□□□□□ -0.68
GIF-201ENST00000257248 HAX1O00165 279 aa10.76□□□□□ -0.69
GIF-201ENST00000257248 SAMD9Q5K651 1589 aa10.75□□□□□ -0.69
GIF-201ENST00000257248 VASPP50552 380 aaPredicted RBP10.75□□□□□ -0.69
GIF-201ENST00000257248 KIAA0556O60303 1618 aa10.75□□□□□ -0.69
GIF-201ENST00000257248 ARAP1Q96P48 1450 aa10.75□□□□□ -0.69
GIF-201ENST00000257248 TNIKQ9UKE5 1360 aa10.75□□□□□ -0.69
GIF-201ENST00000257248 CARMIL2Q6F5E8 1435 aa10.73□□□□□ -0.69
GIF-201ENST00000257248 EFCAB5A4FU69 1503 aa10.73□□□□□ -0.69
GIF-201ENST00000257248 UBTFP17480 764 aaKnown RBP10.71□□□□□ -0.69
GIF-201ENST00000257248 PLCB2Q00722 1185 aa10.69□□□□□ -0.7
GIF-201ENST00000257248 ARHGAP35Q9NRY4 1499 aa10.69□□□□□ -0.7
GIF-201ENST00000257248 IFNLR1Q8IU57 520 aaPredicted RBP10.68□□□□□ -0.7
GIF-201ENST00000257248 SPDYE1Q8NFV5 336 aaPredicted RBP10.68□□□□□ -0.7
GIF-201ENST00000257248 PTPRGP23470 1445 aa10.67□□□□□ -0.7
GIF-201ENST00000257248 LOC105371045A0A1W2PR82 267 aa10.65□□□□□ -0.7
GIF-201ENST00000257248 UHRF1BP1LA0JNW5 1464 aa10.65□□□□□ -0.71
GIF-201ENST00000257248 CLIP1P30622 1438 aa10.64□□□□□ -0.71
GIF-201ENST00000257248 FHOD3Q2V2M9 1422 aa10.64□□□□□ -0.71
GIF-201ENST00000257248 CEP162Q5TB80 1403 aa10.64□□□□□ -0.71
GIF-201ENST00000257248 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
GIF-201ENST00000257248 ABCA8O94911 1581 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms