RNA–Protein interactions for RNA: ENST00000255152.2

ZSWIM3-201, Transcript of zinc finger SWIM-type containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZSWIM3, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3-201ENST00000255152 ABCA10Q8WWZ4 1543 aa18.75■□□□□ 0.59
ZSWIM3-201ENST00000255152 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.59
ZSWIM3-201ENST00000255152 IGF1RP08069 1367 aa18.73■□□□□ 0.59
ZSWIM3-201ENST00000255152 ZNF608Q9ULD9 1512 aaPredicted RBP18.72■□□□□ 0.59
ZSWIM3-201ENST00000255152 RAPGEF2Q9Y4G8 1499 aa18.71■□□□□ 0.59
ZSWIM3-201ENST00000255152 TARBP1Q13395 1621 aaKnown RBP18.7■□□□□ 0.58
ZSWIM3-201ENST00000255152 GAPVD1Q14C86 1478 aa18.67■□□□□ 0.58
ZSWIM3-201ENST00000255152 BCANQ96GW7 911 aa18.67■□□□□ 0.58
ZSWIM3-201ENST00000255152 MSH5O43196 834 aa18.66■□□□□ 0.58
ZSWIM3-201ENST00000255152 MYT1LQ9UL68 1186 aa18.66■□□□□ 0.58
ZSWIM3-201ENST00000255152 IFT140Q96RY7 1462 aa18.66■□□□□ 0.58
ZSWIM3-201ENST00000255152 CARMIL1Q5VZK9 1371 aa18.65■□□□□ 0.58
ZSWIM3-201ENST00000255152 GOLGA3Q08378 1498 aa18.65■□□□□ 0.58
ZSWIM3-201ENST00000255152 WDR97A6NE52 1622 aa18.65■□□□□ 0.58
ZSWIM3-201ENST00000255152 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
ZSWIM3-201ENST00000255152 FKBP8Q14318 412 aa18.6■□□□□ 0.57
ZSWIM3-201ENST00000255152 ABCA5Q8WWZ7 1642 aa18.59■□□□□ 0.57
ZSWIM3-201ENST00000255152 KIF21BO75037 1637 aa18.59■□□□□ 0.57
ZSWIM3-201ENST00000255152 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
ZSWIM3-201ENST00000255152 FBLN2P98095 1184 aa18.57■□□□□ 0.56
ZSWIM3-201ENST00000255152 TNIKQ9UKE5 1360 aa18.55■□□□□ 0.56
ZSWIM3-201ENST00000255152 FANCIQ9NVI1 1328 aa18.54■□□□□ 0.56
ZSWIM3-201ENST00000255152 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
ZSWIM3-201ENST00000255152 GRIN2BQ13224 1484 aa18.52■□□□□ 0.55
ZSWIM3-201ENST00000255152 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
ZSWIM3-201ENST00000255152 DEKP35659 375 aaKnown RBP18.51■□□□□ 0.55
ZSWIM3-201ENST00000255152 ERICH3Q5RHP9 1530 aa18.5■□□□□ 0.55
ZSWIM3-201ENST00000255152 PBRM1Q86U86 1689 aa18.5■□□□□ 0.55
ZSWIM3-201ENST00000255152 SNAPC4Q5SXM2 1469 aa18.48■□□□□ 0.55
ZSWIM3-201ENST00000255152 NEFLP07196 543 aa18.48■□□□□ 0.55
ZSWIM3-201ENST00000255152 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
ZSWIM3-201ENST00000255152 CHMP7Q8WUX9 453 aaPredicted RBP18.45■□□□□ 0.54
ZSWIM3-201ENST00000255152 CUL7Q14999 1698 aa18.44■□□□□ 0.54
ZSWIM3-201ENST00000255152 P3H3Q8IVL6 736 aa18.43■□□□□ 0.54
ZSWIM3-201ENST00000255152 FHAD1B1AJZ9 1412 aa18.42■□□□□ 0.54
ZSWIM3-201ENST00000255152 ERICH6BQ5W0A0 696 aa18.42■□□□□ 0.54
ZSWIM3-201ENST00000255152 CLIP1P30622 1438 aa18.42■□□□□ 0.54
ZSWIM3-201ENST00000255152 ITGAEP38570 1179 aa18.4■□□□□ 0.54
ZSWIM3-201ENST00000255152 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
ZSWIM3-201ENST00000255152 KCNH8Q96L42 1107 aa18.36■□□□□ 0.53
ZSWIM3-201ENST00000255152 SALL2Q9Y467 1007 aaPredicted RBP18.35■□□□□ 0.53
ZSWIM3-201ENST00000255152 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
ZSWIM3-201ENST00000255152 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
ZSWIM3-201ENST00000255152 GRIN2AQ12879 1464 aa18.31■□□□□ 0.52
ZSWIM3-201ENST00000255152 UBE2Q2Q8WVN8 375 aa18.3■□□□□ 0.52
ZSWIM3-201ENST00000255152 CDK11AQ9UQ88 783 aaPredicted RBP18.29■□□□□ 0.52
ZSWIM3-201ENST00000255152 ARHGAP35Q9NRY4 1499 aa18.26■□□□□ 0.51
ZSWIM3-201ENST00000255152 ARAP1Q96P48 1450 aa18.25■□□□□ 0.51
ZSWIM3-201ENST00000255152 ATP1B4Q9UN42 357 aaPredicted RBP18.25■□□□□ 0.51
ZSWIM3-201ENST00000255152 CTTNBP2Q8WZ74 1663 aa18.24■□□□□ 0.51
ZSWIM3-201ENST00000255152 FHOD3Q2V2M9 1422 aa18.22■□□□□ 0.51
ZSWIM3-201ENST00000255152 DHX57Q6P158 1386 aaKnown RBP18.21■□□□□ 0.51
ZSWIM3-201ENST00000255152 CEP170Q5SW79 1584 aa18.2■□□□□ 0.5
ZSWIM3-201ENST00000255152 CCDC136Q96JN2 1154 aa18.19■□□□□ 0.5
ZSWIM3-201ENST00000255152 CHD1O14646 1710 aa18.18■□□□□ 0.5
ZSWIM3-201ENST00000255152 IQGAP2Q13576 1575 aa18.17■□□□□ 0.5
ZSWIM3-201ENST00000255152 VPS8Q8N3P4 1428 aa18.17■□□□□ 0.5
ZSWIM3-201ENST00000255152 KIAA0586Q9BVV6 1533 aa18.16■□□□□ 0.5
ZSWIM3-201ENST00000255152 JPH4Q96JJ6 628 aa18.16■□□□□ 0.5
ZSWIM3-201ENST00000255152 NUP160Q12769 1436 aa18.13■□□□□ 0.49
ZSWIM3-201ENST00000255152 ARID3CA6NKF2 412 aa18.12■□□□□ 0.49
ZSWIM3-201ENST00000255152 NBR1Q14596 966 aa18.1■□□□□ 0.49
ZSWIM3-201ENST00000255152 TRIM52Q96A61 297 aa18.09■□□□□ 0.49
ZSWIM3-201ENST00000255152 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
ZSWIM3-201ENST00000255152 CCER2I3L3R5 266 aa18.06■□□□□ 0.48
ZSWIM3-201ENST00000255152 EFCAB5A4FU69 1503 aa18.05■□□□□ 0.48
ZSWIM3-201ENST00000255152 IL27Q8NEV9 243 aa18.04■□□□□ 0.48
ZSWIM3-201ENST00000255152 SAMD9Q5K651 1589 aa18.04■□□□□ 0.48
ZSWIM3-201ENST00000255152 DISP1Q96F81 1524 aa18.04■□□□□ 0.48
ZSWIM3-201ENST00000255152 KANK4Q5T7N3 995 aaPredicted RBP18.03■□□□□ 0.48
ZSWIM3-201ENST00000255152 UGGT2Q9NYU1 1516 aa18.03■□□□□ 0.48
ZSWIM3-201ENST00000255152 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.02■□□□□ 0.48
ZSWIM3-201ENST00000255152 DDX10Q13206 875 aaKnown RBP18.02■□□□□ 0.48
ZSWIM3-201ENST00000255152 PRG4Q92954 1404 aaPredicted RBP18.02■□□□□ 0.47
ZSWIM3-201ENST00000255152 OSCARQ8IYS5 282 aa18.01■□□□□ 0.47
ZSWIM3-201ENST00000255152 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
ZSWIM3-201ENST00000255152 FMN1Q68DA7 1419 aa17.98■□□□□ 0.47
ZSWIM3-201ENST00000255152 PCF11O94913 1555 aaKnown RBP17.98■□□□□ 0.47
ZSWIM3-201ENST00000255152 KIAA0556O60303 1618 aa17.98■□□□□ 0.47
ZSWIM3-201ENST00000255152 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
ZSWIM3-201ENST00000255152 CARMIL2Q6F5E8 1435 aa17.97■□□□□ 0.47
ZSWIM3-201ENST00000255152 PAK3O75914 559 aaPredicted RBP17.97■□□□□ 0.47
ZSWIM3-201ENST00000255152 ERCC6L2Q5T890 1561 aa17.95■□□□□ 0.46
ZSWIM3-201ENST00000255152 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
ZSWIM3-201ENST00000255152 PPP4R2Q9NY27 417 aa17.94■□□□□ 0.46
ZSWIM3-201ENST00000255152 IRX6P78412 446 aaPredicted RBP17.93■□□□□ 0.46
ZSWIM3-201ENST00000255152 ANP32CO43423 234 aa17.92■□□□□ 0.46
ZSWIM3-201ENST00000255152 CASKIN1Q8WXD9 1431 aa17.92■□□□□ 0.46
ZSWIM3-201ENST00000255152 DAXXQ9UER7 740 aaPredicted RBP17.91■□□□□ 0.46
ZSWIM3-201ENST00000255152 PLB1Q6P1J6 1458 aa17.9■□□□□ 0.46
ZSWIM3-201ENST00000255152 CLASP1Q7Z460 1538 aa17.9■□□□□ 0.46
ZSWIM3-201ENST00000255152 PTPRGP23470 1445 aa17.88■□□□□ 0.45
ZSWIM3-201ENST00000255152 FYCO1Q9BQS8 1478 aa17.88■□□□□ 0.45
ZSWIM3-201ENST00000255152 CDK13Q14004 1512 aaKnown RBP17.84■□□□□ 0.45
ZSWIM3-201ENST00000255152 TIAM1Q13009 1591 aa17.84■□□□□ 0.45
ZSWIM3-201ENST00000255152 SHROOM2Q13796 1616 aa17.84■□□□□ 0.45
ZSWIM3-201ENST00000255152 IPO9Q96P70 1041 aaKnown RBP17.83■□□□□ 0.44
ZSWIM3-201ENST00000255152 LRRIQ1Q96JM4 1722 aa17.82■□□□□ 0.44
ZSWIM3-201ENST00000255152 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
ZSWIM3-201ENST00000255152 C11orf95C9JLR9 678 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms