RNA–Protein interactions for RNA: ENST00000253693.6

CAPN7-201, Transcript of calpain 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN7, Length 4,353 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-201ENST00000253693 ARAP1Q96P48 1450 aa21.78■■□□□ 1.08
CAPN7-201ENST00000253693 CDK11AQ9UQ88 783 aaPredicted RBP21.77■■□□□ 1.08
CAPN7-201ENST00000253693 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
CAPN7-201ENST00000253693 NESP48681 1621 aa21.73■■□□□ 1.07
CAPN7-201ENST00000253693 FHOD3Q2V2M9 1422 aa21.71■■□□□ 1.07
CAPN7-201ENST00000253693 ARHGAP35Q9NRY4 1499 aa21.71■■□□□ 1.07
CAPN7-201ENST00000253693 NEFLP07196 543 aa21.7■■□□□ 1.06
CAPN7-201ENST00000253693 TONSLQ96HA7 1378 aa21.69■■□□□ 1.06
CAPN7-201ENST00000253693 CHIC2Q9UKJ5 165 aa21.66■■□□□ 1.06
CAPN7-201ENST00000253693 FMN1Q68DA7 1419 aa21.66■■□□□ 1.06
CAPN7-201ENST00000253693 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
CAPN7-201ENST00000253693 SETD5Q9C0A6 1442 aa21.63■■□□□ 1.05
CAPN7-201ENST00000253693 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
CAPN7-201ENST00000253693 ANP32CO43423 234 aa21.62■■□□□ 1.05
CAPN7-201ENST00000253693 DHX57Q6P158 1386 aaKnown RBP21.61■■□□□ 1.05
CAPN7-201ENST00000253693 RAB3GAP2Q9H2M9 1393 aa21.61■■□□□ 1.05
CAPN7-201ENST00000253693 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
CAPN7-201ENST00000253693 ZNF777Q9ULD5 760 aaPredicted RBP21.58■■□□□ 1.05
CAPN7-201ENST00000253693 DDX10Q13206 875 aaKnown RBP21.57■■□□□ 1.04
CAPN7-201ENST00000253693 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
CAPN7-201ENST00000253693 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
CAPN7-201ENST00000253693 SIN3AQ96ST3 1273 aa21.56■■□□□ 1.04
CAPN7-201ENST00000253693 RRP7BPQ9NSQ0 103 aa21.56■■□□□ 1.04
CAPN7-201ENST00000253693 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
CAPN7-201ENST00000253693 POLR3GLQ9BT43 218 aa21.53■■□□□ 1.04
CAPN7-201ENST00000253693 RRBP1Q9P2E9 1410 aaKnown RBP21.51■■□□□ 1.03
CAPN7-201ENST00000253693 DNAJC5BQ9UF47 199 aa21.49■■□□□ 1.03
CAPN7-201ENST00000253693 ABCA10Q8WWZ4 1543 aa21.49■■□□□ 1.03
CAPN7-201ENST00000253693 LRRC9Q6ZRR7 1453 aa21.49■■□□□ 1.03
CAPN7-201ENST00000253693 TIMELESSQ9UNS1 1208 aa21.47■■□□□ 1.03
CAPN7-201ENST00000253693 PHLDB1Q86UU1 1377 aa21.46■■□□□ 1.03
CAPN7-201ENST00000253693 HIRIP3Q9BW71 556 aaPredicted RBP21.43■■□□□ 1.02
CAPN7-201ENST00000253693 LAMC3Q9Y6N6 1575 aa21.43■■□□□ 1.02
CAPN7-201ENST00000253693 ZNF326Q5BKZ1 582 aaKnown RBP21.41■■□□□ 1.02
CAPN7-201ENST00000253693 CASKIN1Q8WXD9 1431 aa21.4■■□□□ 1.02
CAPN7-201ENST00000253693 TIAM1Q13009 1591 aa21.39■■□□□ 1.01
CAPN7-201ENST00000253693 CNGB1Q14028 1251 aaPredicted RBP21.37■■□□□ 1.01
CAPN7-201ENST00000253693 MYT1LQ9UL68 1186 aa21.37■■□□□ 1.01
CAPN7-201ENST00000253693 AQRO60306 1485 aaKnown RBP eCLIP21.37■■□□□ 1.012e-7■■■■■ 31
CAPN7-201ENST00000253693 EFCAB5A4FU69 1503 aa21.36■■□□□ 1.01
CAPN7-201ENST00000253693 FYCO1Q9BQS8 1478 aa21.35■■□□□ 1.01
CAPN7-201ENST00000253693 CFDP1Q9UEE9 299 aaPredicted RBP21.35■■□□□ 1.01
CAPN7-201ENST00000253693 URB2Q14146 1524 aaKnown RBP21.35■■□□□ 1.01
CAPN7-201ENST00000253693 PLEKHD1A6NEE1 506 aa21.34■■□□□ 1.01
CAPN7-201ENST00000253693 SLC4A1APQ9BWU0 796 aaKnown RBP21.33■■□□□ 1
CAPN7-201ENST00000253693 PRDM2Q13029 1718 aa21.3■■□□□ 1
CAPN7-201ENST00000253693 TSPY4P0CV99 314 aa21.3■■□□□ 1
CAPN7-201ENST00000253693 TSPY10P0CW01 314 aa21.3■■□□□ 1
CAPN7-201ENST00000253693 CUL7Q14999 1698 aa21.28■■□□□ 1
CAPN7-201ENST00000253693 FGD6Q6ZV73 1430 aa21.27■■□□□ 1
CAPN7-201ENST00000253693 MAP3K1Q13233 1512 aa21.26■□□□□ 0.99
CAPN7-201ENST00000253693 EIF4G2P78344 907 aaKnown RBP eCLIP21.26■□□□□ 0.99
CAPN7-201ENST00000253693 PPP1R15AO75807 674 aaPredicted RBP21.26■□□□□ 0.99
CAPN7-201ENST00000253693 PCF11O94913 1555 aaKnown RBP21.25■□□□□ 0.99
CAPN7-201ENST00000253693 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
CAPN7-201ENST00000253693 GRIN2BQ13224 1484 aa21.23■□□□□ 0.99
CAPN7-201ENST00000253693 BCANQ96GW7 911 aa21.22■□□□□ 0.99
CAPN7-201ENST00000253693 CARMIL2Q6F5E8 1435 aa21.2■□□□□ 0.98
CAPN7-201ENST00000253693 MYOM3Q5VTT5 1437 aa21.19■□□□□ 0.98
CAPN7-201ENST00000253693 CCDC18Q5T9S5 1454 aa21.19■□□□□ 0.98
CAPN7-201ENST00000253693 NCOA2Q15596 1464 aa21.18■□□□□ 0.98
CAPN7-201ENST00000253693 JPH4Q96JJ6 628 aa21.14■□□□□ 0.98
CAPN7-201ENST00000253693 MPHOSPH9Q99550 1183 aa21.14■□□□□ 0.97
CAPN7-201ENST00000253693 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
CAPN7-201ENST00000253693 HNRNPUQ00839 825 aaKnown RBP eCLIP21.12■□□□□ 0.97
CAPN7-201ENST00000253693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.11■□□□□ 0.97
CAPN7-201ENST00000253693 FOXD1Q16676 465 aa21.1■□□□□ 0.97
CAPN7-201ENST00000253693 FKBP8Q14318 412 aa21.09■□□□□ 0.97
CAPN7-201ENST00000253693 UACAQ9BZF9 1416 aa21.07■□□□□ 0.96
CAPN7-201ENST00000253693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.06■□□□□ 0.966e-6■□□□□ 8.2
CAPN7-201ENST00000253693 EHBP1L1Q8N3D4 1523 aa21.04■□□□□ 0.96
CAPN7-201ENST00000253693 KDM2AQ9Y2K7 1162 aa21.04■□□□□ 0.96
CAPN7-201ENST00000253693 KCNH8Q96L42 1107 aa21.04■□□□□ 0.96
CAPN7-201ENST00000253693 CCER2I3L3R5 266 aa21.02■□□□□ 0.96
CAPN7-201ENST00000253693 FAM9BQ8IZU0 186 aa21.02■□□□□ 0.96
CAPN7-201ENST00000253693 IQGAP2Q13576 1575 aa21.02■□□□□ 0.95
CAPN7-201ENST00000253693 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
CAPN7-201ENST00000253693 HSPA5P11021 654 aaKnown RBP21.01■□□□□ 0.95
CAPN7-201ENST00000253693 CTTNBP2Q8WZ74 1663 aa21■□□□□ 0.95
CAPN7-201ENST00000253693 ERICH6Q7L0X2 663 aa21■□□□□ 0.95
CAPN7-201ENST00000253693 MRS2Q9HD23 443 aa20.99■□□□□ 0.95
CAPN7-201ENST00000253693 HFM1A2PYH4 1435 aa20.99■□□□□ 0.95
CAPN7-201ENST00000253693 L3MBTL2Q969R5 705 aa20.98■□□□□ 0.95
CAPN7-201ENST00000253693 ZNF644Q9H582 1327 aaPredicted RBP20.97■□□□□ 0.95
CAPN7-201ENST00000253693 HECW1Q76N89 1606 aa20.97■□□□□ 0.95
CAPN7-201ENST00000253693 SUPT6HQ7KZ85 1726 aaKnown RBP20.97■□□□□ 0.95
CAPN7-201ENST00000253693 ZNF608Q9ULD9 1512 aaPredicted RBP20.97■□□□□ 0.95
CAPN7-201ENST00000253693 MYT1Q01538 1121 aa20.97■□□□□ 0.95
CAPN7-201ENST00000253693 ANKRD30AQ9BXX3 1397 aa20.96■□□□□ 0.95
CAPN7-201ENST00000253693 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
CAPN7-201ENST00000253693 EPRSP07814 1512 aaKnown RBP20.96■□□□□ 0.95
CAPN7-201ENST00000253693 KIAA0586Q9BVV6 1533 aa20.95■□□□□ 0.94
CAPN7-201ENST00000253693 PKD2Q13563 968 aa20.95■□□□□ 0.94
CAPN7-201ENST00000253693 CDK13Q14004 1512 aaKnown RBP20.93■□□□□ 0.94
CAPN7-201ENST00000253693 CFAP43Q8NDM7 1665 aa20.92■□□□□ 0.94
CAPN7-201ENST00000253693 MIA2Q96PC5 1412 aa20.92■□□□□ 0.94
CAPN7-201ENST00000253693 SUPT16HQ9Y5B9 1047 aaKnown RBP20.91■□□□□ 0.94
CAPN7-201ENST00000253693 ABCA5Q8WWZ7 1642 aa20.91■□□□□ 0.94
CAPN7-201ENST00000253693 NAIPQ13075 1403 aa20.9■□□□□ 0.94
CAPN7-201ENST00000253693 CARD11Q9BXL7 1154 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms