RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 RRBP1Q9P2E9 1410 aaKnown RBP18■□□□□ 0.47
RAB3IP-201ENST00000247833 FHOD3Q2V2M9 1422 aa17.99■□□□□ 0.47
RAB3IP-201ENST00000247833 KCNH8Q96L42 1107 aa17.97■□□□□ 0.47
RAB3IP-201ENST00000247833 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
RAB3IP-201ENST00000247833 SETD5Q9C0A6 1442 aa17.95■□□□□ 0.46
RAB3IP-201ENST00000247833 PHLDB1Q86UU1 1377 aa17.95■□□□□ 0.46
RAB3IP-201ENST00000247833 FHAD1B1AJZ9 1412 aa17.94■□□□□ 0.46
RAB3IP-201ENST00000247833 MTUS2Q5JR59 1369 aa17.93■□□□□ 0.46
RAB3IP-201ENST00000247833 FANCD2Q9BXW9 1451 aa17.93■□□□□ 0.46
RAB3IP-201ENST00000247833 CHIC2Q9UKJ5 165 aa17.92■□□□□ 0.46
RAB3IP-201ENST00000247833 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
RAB3IP-201ENST00000247833 TDRD9Q8NDG6 1382 aaKnown RBP17.9■□□□□ 0.46
RAB3IP-201ENST00000247833 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
RAB3IP-201ENST00000247833 TONSLQ96HA7 1378 aa17.87■□□□□ 0.45
RAB3IP-201ENST00000247833 SUPT16HQ9Y5B9 1047 aaKnown RBP17.87■□□□□ 0.45
RAB3IP-201ENST00000247833 NESP48681 1621 aa17.86■□□□□ 0.45
RAB3IP-201ENST00000247833 ANP32CO43423 234 aa17.85■□□□□ 0.45
RAB3IP-201ENST00000247833 NEFLP07196 543 aa17.85■□□□□ 0.45
RAB3IP-201ENST00000247833 RRP7BPQ9NSQ0 103 aa17.84■□□□□ 0.45
RAB3IP-201ENST00000247833 TIAM1Q13009 1591 aa17.83■□□□□ 0.45
RAB3IP-201ENST00000247833 CNGB1Q14028 1251 aaPredicted RBP17.81■□□□□ 0.44
RAB3IP-201ENST00000247833 FKBP8Q14318 412 aa17.8■□□□□ 0.44
RAB3IP-201ENST00000247833 CC2D2AQ9P2K1 1620 aa17.79■□□□□ 0.44
RAB3IP-201ENST00000247833 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
RAB3IP-201ENST00000247833 PPP1R15AO75807 674 aaPredicted RBP17.75■□□□□ 0.43
RAB3IP-201ENST00000247833 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
RAB3IP-201ENST00000247833 PCF11O94913 1555 aaKnown RBP17.73■□□□□ 0.43
RAB3IP-201ENST00000247833 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
RAB3IP-201ENST00000247833 POLR3GLQ9BT43 218 aa17.71■□□□□ 0.43
RAB3IP-201ENST00000247833 FMN1Q68DA7 1419 aa17.71■□□□□ 0.43
RAB3IP-201ENST00000247833 MAPKBP1O60336 1514 aa17.7■□□□□ 0.42
RAB3IP-201ENST00000247833 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
RAB3IP-201ENST00000247833 CASKIN1Q8WXD9 1431 aa17.66■□□□□ 0.42
RAB3IP-201ENST00000247833 FBLN2P98095 1184 aa17.66■□□□□ 0.42
RAB3IP-201ENST00000247833 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
RAB3IP-201ENST00000247833 FOXD1Q16676 465 aa17.66■□□□□ 0.42
RAB3IP-201ENST00000247833 TIMELESSQ9UNS1 1208 aa17.64■□□□□ 0.41
RAB3IP-201ENST00000247833 HNRNPUQ00839 825 aaKnown RBP eCLIP17.63■□□□□ 0.41
RAB3IP-201ENST00000247833 DNMBPQ6XZF7 1577 aa17.63■□□□□ 0.41
RAB3IP-201ENST00000247833 FYCO1Q9BQS8 1478 aa17.63■□□□□ 0.41
RAB3IP-201ENST00000247833 ZNF326Q5BKZ1 582 aaKnown RBP17.63■□□□□ 0.41
RAB3IP-201ENST00000247833 ABCA10Q8WWZ4 1543 aa17.63■□□□□ 0.41
RAB3IP-201ENST00000247833 CCDC18Q5T9S5 1454 aa17.62■□□□□ 0.41
RAB3IP-201ENST00000247833 MAP3K1Q13233 1512 aa17.62■□□□□ 0.41
RAB3IP-201ENST00000247833 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
RAB3IP-201ENST00000247833 GAPVD1Q14C86 1478 aa17.61■□□□□ 0.41
RAB3IP-201ENST00000247833 IRX6P78412 446 aaPredicted RBP17.6■□□□□ 0.41
RAB3IP-201ENST00000247833 MYT1Q01538 1121 aa17.59■□□□□ 0.41
RAB3IP-201ENST00000247833 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.41
RAB3IP-201ENST00000247833 NCOA2Q15596 1464 aa17.55■□□□□ 0.4
RAB3IP-201ENST00000247833 EFCAB5A4FU69 1503 aa17.55■□□□□ 0.4
RAB3IP-201ENST00000247833 TSHZ2Q9NRE2 1034 aa17.54■□□□□ 0.4
RAB3IP-201ENST00000247833 PRDM2Q13029 1718 aa17.54■□□□□ 0.4
RAB3IP-201ENST00000247833 URB2Q14146 1524 aaKnown RBP17.54■□□□□ 0.4
RAB3IP-201ENST00000247833 HSPA5P11021 654 aaKnown RBP17.53■□□□□ 0.4
RAB3IP-201ENST00000247833 EIF4G2P78344 907 aaKnown RBP eCLIP17.53■□□□□ 0.4
RAB3IP-201ENST00000247833 FAM9BQ8IZU0 186 aa17.53■□□□□ 0.4
RAB3IP-201ENST00000247833 MYOM3Q5VTT5 1437 aa17.53■□□□□ 0.4
RAB3IP-201ENST00000247833 PTPRKQ15262 1439 aa17.53■□□□□ 0.4
RAB3IP-201ENST00000247833 CCER2I3L3R5 266 aa17.51■□□□□ 0.39
RAB3IP-201ENST00000247833 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
RAB3IP-201ENST00000247833 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
RAB3IP-201ENST00000247833 UACAQ9BZF9 1416 aa17.5■□□□□ 0.39
RAB3IP-201ENST00000247833 MPHOSPH9Q99550 1183 aa17.49■□□□□ 0.39
RAB3IP-201ENST00000247833 L3MBTL2Q969R5 705 aa17.48■□□□□ 0.39
RAB3IP-201ENST00000247833 CFAP43Q8NDM7 1665 aa17.47■□□□□ 0.39
RAB3IP-201ENST00000247833 CDK11AQ9UQ88 783 aaPredicted RBP17.47■□□□□ 0.39
RAB3IP-201ENST00000247833 SENP3-EIF4A1A0A087X0R7 540 aa17.47■□□□□ 0.39
RAB3IP-201ENST00000247833 HFM1A2PYH4 1435 aa17.47■□□□□ 0.39
RAB3IP-201ENST00000247833 NAIPQ13075 1403 aa17.46■□□□□ 0.39
RAB3IP-201ENST00000247833 CUL7Q14999 1698 aa17.45■□□□□ 0.38
RAB3IP-201ENST00000247833 ZNF644Q9H582 1327 aaPredicted RBP17.45■□□□□ 0.38
RAB3IP-201ENST00000247833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.44■□□□□ 0.38
RAB3IP-201ENST00000247833 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
RAB3IP-201ENST00000247833 CHMP7Q8WUX9 453 aaPredicted RBP17.43■□□□□ 0.38
RAB3IP-201ENST00000247833 SNAPC4Q5SXM2 1469 aa17.42■□□□□ 0.38
RAB3IP-201ENST00000247833 CFDP1Q9UEE9 299 aaPredicted RBP17.41■□□□□ 0.38
RAB3IP-201ENST00000247833 CTTNBP2Q8WZ74 1663 aa17.38■□□□□ 0.37
RAB3IP-201ENST00000247833 WASHC2AQ641Q2 1341 aa17.38■□□□□ 0.37
RAB3IP-201ENST00000247833 CDK13Q14004 1512 aaKnown RBP17.38■□□□□ 0.37
RAB3IP-201ENST00000247833 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
RAB3IP-201ENST00000247833 PTPN23Q9H3S7 1636 aa17.36■□□□□ 0.37
RAB3IP-201ENST00000247833 GRIN2BQ13224 1484 aa17.35■□□□□ 0.37
RAB3IP-201ENST00000247833 EHBP1L1Q8N3D4 1523 aa17.35■□□□□ 0.37
RAB3IP-201ENST00000247833 KDM2AQ9Y2K7 1162 aa17.34■□□□□ 0.37
RAB3IP-201ENST00000247833 SUPT6HQ7KZ85 1726 aaKnown RBP17.34■□□□□ 0.37
RAB3IP-201ENST00000247833 ERICH6Q7L0X2 663 aa17.33■□□□□ 0.37
RAB3IP-201ENST00000247833 CCDC184Q52MB2 194 aa17.32■□□□□ 0.36
RAB3IP-201ENST00000247833 EPRSP07814 1512 aaKnown RBP17.3■□□□□ 0.36
RAB3IP-201ENST00000247833 RBM19Q9Y4C8 960 aaKnown RBP17.29■□□□□ 0.36
RAB3IP-201ENST00000247833 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
RAB3IP-201ENST00000247833 C11orf95C9JLR9 678 aaPredicted RBP17.28■□□□□ 0.36
RAB3IP-201ENST00000247833 PKD2Q13563 968 aa17.27■□□□□ 0.36
RAB3IP-201ENST00000247833 MAGI3Q5TCQ9 1506 aa17.26■□□□□ 0.35
RAB3IP-201ENST00000247833 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
RAB3IP-201ENST00000247833 UGGT2Q9NYU1 1516 aa17.25■□□□□ 0.35
RAB3IP-201ENST00000247833 PLEKHD1A6NEE1 506 aa17.25■□□□□ 0.35
RAB3IP-201ENST00000247833 IQGAP2Q13576 1575 aa17.24■□□□□ 0.35
RAB3IP-201ENST00000247833 ABCA5Q8WWZ7 1642 aa17.24■□□□□ 0.35
RAB3IP-201ENST00000247833 ANP32EQ9BTT0 268 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms