RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 PHLDB1Q86UU1 1377 aa17.48■□□□□ 0.39
SEC61A1-201ENST00000243253 LRRIQ1Q96JM4 1722 aa17.46■□□□□ 0.39
SEC61A1-201ENST00000243253 CADPSQ9ULU8 1353 aa17.46■□□□□ 0.38
SEC61A1-201ENST00000243253 WDR97A6NE52 1622 aa17.46■□□□□ 0.38
SEC61A1-201ENST00000243253 CTTNBP2Q8WZ74 1663 aa17.44■□□□□ 0.38
SEC61A1-201ENST00000243253 CARMIL1Q5VZK9 1371 aa17.43■□□□□ 0.38
SEC61A1-201ENST00000243253 SETD5Q9C0A6 1442 aa17.41■□□□□ 0.38
SEC61A1-201ENST00000243253 SUPT16HQ9Y5B9 1047 aaKnown RBP17.4■□□□□ 0.38
SEC61A1-201ENST00000243253 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
SEC61A1-201ENST00000243253 AQRO60306 1485 aaKnown RBP eCLIP17.39■□□□□ 0.372e-6■■■■■ 28
SEC61A1-201ENST00000243253 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
SEC61A1-201ENST00000243253 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
SEC61A1-201ENST00000243253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.37■□□□□ 0.37
SEC61A1-201ENST00000243253 EFCAB5A4FU69 1503 aa17.37■□□□□ 0.37
SEC61A1-201ENST00000243253 CUL7Q14999 1698 aa17.37■□□□□ 0.37
SEC61A1-201ENST00000243253 FYCO1Q9BQS8 1478 aa17.37■□□□□ 0.37
SEC61A1-201ENST00000243253 FHAD1B1AJZ9 1412 aa17.35■□□□□ 0.37
SEC61A1-201ENST00000243253 SNAPC4Q5SXM2 1469 aa17.35■□□□□ 0.37
SEC61A1-201ENST00000243253 SAMD9Q5K651 1589 aa17.33■□□□□ 0.36
SEC61A1-201ENST00000243253 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
SEC61A1-201ENST00000243253 CASKIN1Q8WXD9 1431 aa17.32■□□□□ 0.36
SEC61A1-201ENST00000243253 MYT1Q01538 1121 aa17.32■□□□□ 0.36
SEC61A1-201ENST00000243253 KDM5BQ9UGL1 1544 aa17.31■□□□□ 0.36
SEC61A1-201ENST00000243253 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
SEC61A1-201ENST00000243253 POLA1P09884 1462 aaPredicted RBP17.3■□□□□ 0.36
SEC61A1-201ENST00000243253 TOPBP1Q92547 1522 aa17.29■□□□□ 0.36
SEC61A1-201ENST00000243253 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
SEC61A1-201ENST00000243253 RAD54L2Q9Y4B4 1467 aa17.28■□□□□ 0.36
SEC61A1-201ENST00000243253 PPP1R15AO75807 674 aaPredicted RBP17.28■□□□□ 0.36
SEC61A1-201ENST00000243253 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
SEC61A1-201ENST00000243253 FAM50AQ14320 339 aaKnown RBP17.26■□□□□ 0.35
SEC61A1-201ENST00000243253 FHOD3Q2V2M9 1422 aa17.26■□□□□ 0.35
SEC61A1-201ENST00000243253 HIRIP3Q9BW71 556 aaPredicted RBP17.25■□□□□ 0.35
SEC61A1-201ENST00000243253 PTPRKQ15262 1439 aa17.24■□□□□ 0.35
SEC61A1-201ENST00000243253 PTPN23Q9H3S7 1636 aa17.23■□□□□ 0.35
SEC61A1-201ENST00000243253 ARHGEF11O15085 1522 aa17.23■□□□□ 0.35
SEC61A1-201ENST00000243253 TIMELESSQ9UNS1 1208 aa17.23■□□□□ 0.35
SEC61A1-201ENST00000243253 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
SEC61A1-201ENST00000243253 FGD6Q6ZV73 1430 aa17.2■□□□□ 0.34
SEC61A1-201ENST00000243253 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
SEC61A1-201ENST00000243253 THOC2Q8NI27 1593 aaKnown RBP17.19■□□□□ 0.34
SEC61A1-201ENST00000243253 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
SEC61A1-201ENST00000243253 KIF21AQ7Z4S6 1674 aa17.19■□□□□ 0.34
SEC61A1-201ENST00000243253 TSHZ2Q9NRE2 1034 aa17.18■□□□□ 0.34
SEC61A1-201ENST00000243253 HFM1A2PYH4 1435 aa17.18■□□□□ 0.34
SEC61A1-201ENST00000243253 DENND4BO75064 1496 aaPredicted RBP17.17■□□□□ 0.34
SEC61A1-201ENST00000243253 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
SEC61A1-201ENST00000243253 NESP48681 1621 aa17.16■□□□□ 0.34
SEC61A1-201ENST00000243253 MAGI3Q5TCQ9 1506 aa17.15■□□□□ 0.34
SEC61A1-201ENST00000243253 GCC2Q8IWJ2 1684 aa17.15■□□□□ 0.34
SEC61A1-201ENST00000243253 CCDC18Q5T9S5 1454 aa17.13■□□□□ 0.33
SEC61A1-201ENST00000243253 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
SEC61A1-201ENST00000243253 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
SEC61A1-201ENST00000243253 UGGT2Q9NYU1 1516 aa17.12■□□□□ 0.33
SEC61A1-201ENST00000243253 SUPT6HQ7KZ85 1726 aaKnown RBP17.12■□□□□ 0.33
SEC61A1-201ENST00000243253 NAIPQ13075 1403 aa17.12■□□□□ 0.33
SEC61A1-201ENST00000243253 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
SEC61A1-201ENST00000243253 BCANQ96GW7 911 aa17.1■□□□□ 0.33
SEC61A1-201ENST00000243253 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
SEC61A1-201ENST00000243253 TARBP1Q13395 1621 aaKnown RBP17.09■□□□□ 0.33
SEC61A1-201ENST00000243253 NCOA2Q15596 1464 aa17.08■□□□□ 0.33
SEC61A1-201ENST00000243253 TCOF1Q13428 1488 aaKnown RBP17.08■□□□□ 0.32
SEC61A1-201ENST00000243253 EHBP1L1Q8N3D4 1523 aa17.07■□□□□ 0.32
SEC61A1-201ENST00000243253 DDX10Q13206 875 aaKnown RBP17.07■□□□□ 0.32
SEC61A1-201ENST00000243253 KDM6BO15054 1643 aa17.07■□□□□ 0.32
SEC61A1-201ENST00000243253 CCER2I3L3R5 266 aa17.06■□□□□ 0.32
SEC61A1-201ENST00000243253 MYOM3Q5VTT5 1437 aa17.06■□□□□ 0.32
SEC61A1-201ENST00000243253 PBRM1Q86U86 1689 aa17.01■□□□□ 0.31
SEC61A1-201ENST00000243253 POLR1AO95602 1720 aaPredicted RBP16.99■□□□□ 0.31
SEC61A1-201ENST00000243253 AKNAQ7Z591 1439 aa16.99■□□□□ 0.31
SEC61A1-201ENST00000243253 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
SEC61A1-201ENST00000243253 MTUS2Q5JR59 1369 aa16.93■□□□□ 0.3
SEC61A1-201ENST00000243253 WDR62O43379 1518 aa16.92■□□□□ 0.3
SEC61A1-201ENST00000243253 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
SEC61A1-201ENST00000243253 ADAMTS12P58397 1594 aa16.9■□□□□ 0.3
SEC61A1-201ENST00000243253 CHIC2Q9UKJ5 165 aa16.9■□□□□ 0.3
SEC61A1-201ENST00000243253 TONSLQ96HA7 1378 aa16.9■□□□□ 0.3
SEC61A1-201ENST00000243253 FKBP8Q14318 412 aa16.9■□□□□ 0.3
SEC61A1-201ENST00000243253 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
SEC61A1-201ENST00000243253 SENP3-EIF4A1A0A087X0R7 540 aa16.89■□□□□ 0.29
SEC61A1-201ENST00000243253 IQGAP2Q13576 1575 aa16.88■□□□□ 0.29
SEC61A1-201ENST00000243253 POLR3GLQ9BT43 218 aa16.87■□□□□ 0.29
SEC61A1-201ENST00000243253 WASHC2AQ641Q2 1341 aa16.86■□□□□ 0.29
SEC61A1-201ENST00000243253 MIA2Q96PC5 1412 aa16.85■□□□□ 0.29
SEC61A1-201ENST00000243253 ANP32EQ9BTT0 268 aa16.85■□□□□ 0.29
SEC61A1-201ENST00000243253 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
SEC61A1-201ENST00000243253 DNMT1P26358 1616 aaKnown RBP16.85■□□□□ 0.29
SEC61A1-201ENST00000243253 ANP32CO43423 234 aa16.84■□□□□ 0.29
SEC61A1-201ENST00000243253 TEX14Q8IWB6 1497 aa16.84■□□□□ 0.29
SEC61A1-201ENST00000243253 TRIM52Q96A61 297 aa16.84■□□□□ 0.29
SEC61A1-201ENST00000243253 CDK13Q14004 1512 aaKnown RBP16.84■□□□□ 0.29
SEC61A1-201ENST00000243253 SPATA31E1Q6ZUB1 1445 aa16.82■□□□□ 0.28
SEC61A1-201ENST00000243253 NCOA1Q15788 1441 aa16.81■□□□□ 0.28
SEC61A1-201ENST00000243253 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
SEC61A1-201ENST00000243253 RPRD2Q5VT52 1461 aaKnown RBP16.79■□□□□ 0.28
SEC61A1-201ENST00000243253 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
SEC61A1-201ENST00000243253 RBM19Q9Y4C8 960 aaKnown RBP16.77■□□□□ 0.28
SEC61A1-201ENST00000243253 ROCK1Q13464 1354 aa16.76■□□□□ 0.27
SEC61A1-201ENST00000243253 KIAA0556O60303 1618 aa16.76■□□□□ 0.27
SEC61A1-201ENST00000243253 DISP1Q96F81 1524 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms