RNA–Protein interactions for RNA: ENST00000241274.3

SLITRK3-201, Transcript of SLIT and NTRK like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLITRK3, Length 4,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLITRK3-201ENST00000241274 HIRIP3Q9BW71 556 aaPredicted RBP17.95■□□□□ 0.46
SLITRK3-201ENST00000241274 IGF1RP08069 1367 aa17.95■□□□□ 0.46
SLITRK3-201ENST00000241274 DDX10Q13206 875 aaKnown RBP17.95■□□□□ 0.46
SLITRK3-201ENST00000241274 ERICH3Q5RHP9 1530 aa17.94■□□□□ 0.46
SLITRK3-201ENST00000241274 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
SLITRK3-201ENST00000241274 PRDM2Q13029 1718 aa17.93■□□□□ 0.46
SLITRK3-201ENST00000241274 RBM19Q9Y4C8 960 aaKnown RBP17.91■□□□□ 0.46
SLITRK3-201ENST00000241274 TOPBP1Q92547 1522 aa17.91■□□□□ 0.46
SLITRK3-201ENST00000241274 RAD54L2Q9Y4B4 1467 aa17.91■□□□□ 0.46
SLITRK3-201ENST00000241274 CLSPNQ9HAW4 1339 aa17.91■□□□□ 0.46
SLITRK3-201ENST00000241274 DNMBPQ6XZF7 1577 aa17.9■□□□□ 0.46
SLITRK3-201ENST00000241274 IRX6P78412 446 aaPredicted RBP17.89■□□□□ 0.46
SLITRK3-201ENST00000241274 P3H3Q8IVL6 736 aa17.88■□□□□ 0.45
SLITRK3-201ENST00000241274 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
SLITRK3-201ENST00000241274 TDRD9Q8NDG6 1382 aaKnown RBP17.85■□□□□ 0.45
SLITRK3-201ENST00000241274 ABCA10Q8WWZ4 1543 aa17.78■□□□□ 0.44
SLITRK3-201ENST00000241274 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.44
SLITRK3-201ENST00000241274 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
SLITRK3-201ENST00000241274 GAPVD1Q14C86 1478 aa17.72■□□□□ 0.43
SLITRK3-201ENST00000241274 ARAP1Q96P48 1450 aa17.71■□□□□ 0.43
SLITRK3-201ENST00000241274 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
SLITRK3-201ENST00000241274 KANK4Q5T7N3 995 aaPredicted RBP17.68■□□□□ 0.42
SLITRK3-201ENST00000241274 MRC2Q9UBG0 1479 aa17.68■□□□□ 0.42
SLITRK3-201ENST00000241274 CNGB1Q14028 1251 aaPredicted RBP17.68■□□□□ 0.42
SLITRK3-201ENST00000241274 CDK11AQ9UQ88 783 aaPredicted RBP17.67■□□□□ 0.42
SLITRK3-201ENST00000241274 DHX57Q6P158 1386 aaKnown RBP17.67■□□□□ 0.42
SLITRK3-201ENST00000241274 FHAD1B1AJZ9 1412 aa17.67■□□□□ 0.42
SLITRK3-201ENST00000241274 NBR1Q14596 966 aa17.66■□□□□ 0.42
SLITRK3-201ENST00000241274 ANP32CO43423 234 aa17.66■□□□□ 0.42
SLITRK3-201ENST00000241274 SIN3AQ96ST3 1273 aa17.66■□□□□ 0.42
SLITRK3-201ENST00000241274 MSH5O43196 834 aa17.65■□□□□ 0.42
SLITRK3-201ENST00000241274 FBLN2P98095 1184 aa17.63■□□□□ 0.41
SLITRK3-201ENST00000241274 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
SLITRK3-201ENST00000241274 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
SLITRK3-201ENST00000241274 FAM50AQ14320 339 aaKnown RBP17.61■□□□□ 0.41
SLITRK3-201ENST00000241274 FHOD3Q2V2M9 1422 aa17.6■□□□□ 0.41
SLITRK3-201ENST00000241274 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.41
SLITRK3-201ENST00000241274 CUL7Q14999 1698 aa17.59■□□□□ 0.41
SLITRK3-201ENST00000241274 CHMP7Q8WUX9 453 aaPredicted RBP17.55■□□□□ 0.4
SLITRK3-201ENST00000241274 IFT140Q96RY7 1462 aa17.53■□□□□ 0.4
SLITRK3-201ENST00000241274 FMN1Q68DA7 1419 aa17.53■□□□□ 0.4
SLITRK3-201ENST00000241274 DEKP35659 375 aaKnown RBP17.52■□□□□ 0.4
SLITRK3-201ENST00000241274 GRIN2BQ13224 1484 aa17.51■□□□□ 0.39
SLITRK3-201ENST00000241274 SENP3-EIF4A1A0A087X0R7 540 aa17.51■□□□□ 0.39
SLITRK3-201ENST00000241274 CCNB3Q8WWL7 1395 aa17.51■□□□□ 0.39
SLITRK3-201ENST00000241274 MTUS2Q5JR59 1369 aa17.5■□□□□ 0.39
SLITRK3-201ENST00000241274 EFCAB5A4FU69 1503 aa17.48■□□□□ 0.39
SLITRK3-201ENST00000241274 ARID3CA6NKF2 412 aa17.47■□□□□ 0.39
SLITRK3-201ENST00000241274 B4GALNT3Q6L9W6 998 aa17.45■□□□□ 0.38
SLITRK3-201ENST00000241274 ABCA5Q8WWZ7 1642 aa17.45■□□□□ 0.38
SLITRK3-201ENST00000241274 RTN4Q9NQC3 1192 aaKnown RBP17.45■□□□□ 0.38
SLITRK3-201ENST00000241274 PRKCSHP14314 528 aaPredicted RBP17.45■□□□□ 0.38
SLITRK3-201ENST00000241274 CASKIN1Q8WXD9 1431 aa17.42■□□□□ 0.38
SLITRK3-201ENST00000241274 TARBP1Q13395 1621 aaKnown RBP17.41■□□□□ 0.38
SLITRK3-201ENST00000241274 ZNF608Q9ULD9 1512 aaPredicted RBP17.41■□□□□ 0.38
SLITRK3-201ENST00000241274 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
SLITRK3-201ENST00000241274 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
SLITRK3-201ENST00000241274 TIAM1Q13009 1591 aa17.4■□□□□ 0.38
SLITRK3-201ENST00000241274 FYCO1Q9BQS8 1478 aa17.39■□□□□ 0.37
SLITRK3-201ENST00000241274 WDR97A6NE52 1622 aa17.39■□□□□ 0.37
SLITRK3-201ENST00000241274 WDR62O43379 1518 aa17.38■□□□□ 0.37
SLITRK3-201ENST00000241274 RRBP1Q9P2E9 1410 aaKnown RBP17.37■□□□□ 0.37
SLITRK3-201ENST00000241274 RAB3GAP2Q9H2M9 1393 aa17.37■□□□□ 0.37
SLITRK3-201ENST00000241274 RTL5Q5HYW3 569 aaPredicted RBP17.37■□□□□ 0.37
SLITRK3-201ENST00000241274 ANO8Q9HCE9 1232 aaPredicted RBP17.36■□□□□ 0.37
SLITRK3-201ENST00000241274 CTTNBP2Q8WZ74 1663 aa17.36■□□□□ 0.37
SLITRK3-201ENST00000241274 MAP3K1Q13233 1512 aa17.36■□□□□ 0.37
SLITRK3-201ENST00000241274 PCF11O94913 1555 aaKnown RBP17.36■□□□□ 0.37
SLITRK3-201ENST00000241274 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
SLITRK3-201ENST00000241274 POLR3GLQ9BT43 218 aa17.35■□□□□ 0.37
SLITRK3-201ENST00000241274 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
SLITRK3-201ENST00000241274 NPM2Q86SE8 214 aaKnown RBP17.32■□□□□ 0.36
SLITRK3-201ENST00000241274 PHLDB1Q86UU1 1377 aa17.32■□□□□ 0.36
SLITRK3-201ENST00000241274 PPP1R15AO75807 674 aaPredicted RBP17.31■□□□□ 0.36
SLITRK3-201ENST00000241274 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
SLITRK3-201ENST00000241274 IQGAP2Q13576 1575 aa17.3■□□□□ 0.36
SLITRK3-201ENST00000241274 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
SLITRK3-201ENST00000241274 FANCIQ9NVI1 1328 aa17.29■□□□□ 0.36
SLITRK3-201ENST00000241274 CCER2I3L3R5 266 aa17.27■□□□□ 0.36
SLITRK3-201ENST00000241274 PAK3O75914 559 aaPredicted RBP17.26■□□□□ 0.35
SLITRK3-201ENST00000241274 NOP58Q9Y2X3 529 aaKnown RBP17.26■□□□□ 0.35
SLITRK3-201ENST00000241274 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
SLITRK3-201ENST00000241274 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.26■□□□□ 0.35
SLITRK3-201ENST00000241274 TONSLQ96HA7 1378 aa17.25■□□□□ 0.35
SLITRK3-201ENST00000241274 GRIN2AQ12879 1464 aa17.25■□□□□ 0.35
SLITRK3-201ENST00000241274 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
SLITRK3-201ENST00000241274 CARMIL2Q6F5E8 1435 aa17.25■□□□□ 0.35
SLITRK3-201ENST00000241274 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
SLITRK3-201ENST00000241274 PPP4R2Q9NY27 417 aa17.24■□□□□ 0.35
SLITRK3-201ENST00000241274 SETD5Q9C0A6 1442 aa17.23■□□□□ 0.35
SLITRK3-201ENST00000241274 EIF4G3O43432 1585 aaKnown RBP17.22■□□□□ 0.35
SLITRK3-201ENST00000241274 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
SLITRK3-201ENST00000241274 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
SLITRK3-201ENST00000241274 ANP32AP39687 249 aaKnown RBP17.2■□□□□ 0.34
SLITRK3-201ENST00000241274 SALL2Q9Y467 1007 aaPredicted RBP17.2■□□□□ 0.34
SLITRK3-201ENST00000241274 MRS2Q9HD23 443 aa17.2■□□□□ 0.34
SLITRK3-201ENST00000241274 SAMD9Q5K651 1589 aa17.19■□□□□ 0.34
SLITRK3-201ENST00000241274 CHIC2Q9UKJ5 165 aa17.19■□□□□ 0.34
SLITRK3-201ENST00000241274 FGD6Q6ZV73 1430 aa17.18■□□□□ 0.34
SLITRK3-201ENST00000241274 CFAP43Q8NDM7 1665 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms