RNA–Protein interactions for RNA: ENST00000235790.8

KDM5B-201, Transcript of lysine demethylase 5B, humanhuman

TSL 2

Gene KDM5B, Length 4,418 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-201ENST00000235790 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
KDM5B-201ENST00000235790 EIF4G1Q04637 1599 aaKnown RBP19.71■□□□□ 0.75
KDM5B-201ENST00000235790 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
KDM5B-201ENST00000235790 IGF1RP08069 1367 aa19.66■□□□□ 0.74
KDM5B-201ENST00000235790 KIF21BO75037 1637 aa19.65■□□□□ 0.74
KDM5B-201ENST00000235790 UNC13AQ9UPW8 1703 aa19.64■□□□□ 0.74
KDM5B-201ENST00000235790 RAB3GAP2Q9H2M9 1393 aa19.64■□□□□ 0.73
KDM5B-201ENST00000235790 SETD5Q9C0A6 1442 aa19.62■□□□□ 0.73
KDM5B-201ENST00000235790 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
KDM5B-201ENST00000235790 FHOD3Q2V2M9 1422 aa19.61■□□□□ 0.73
KDM5B-201ENST00000235790 DHX57Q6P158 1386 aaKnown RBP19.59■□□□□ 0.73
KDM5B-201ENST00000235790 CFTRP13569 1480 aa19.58■□□□□ 0.73
KDM5B-201ENST00000235790 FGD5Q6ZNL6 1462 aa19.58■□□□□ 0.72
KDM5B-201ENST00000235790 FKBP8Q14318 412 aa19.57■□□□□ 0.72
KDM5B-201ENST00000235790 PDS5BQ9NTI5 1447 aa19.56■□□□□ 0.72
KDM5B-201ENST00000235790 ARHGAP35Q9NRY4 1499 aa19.55■□□□□ 0.72
KDM5B-201ENST00000235790 HNRNPUQ00839 825 aaKnown RBP eCLIP19.55■□□□□ 0.72
KDM5B-201ENST00000235790 TOP2BQ02880 1626 aa19.55■□□□□ 0.72
KDM5B-201ENST00000235790 SLC4A1APQ9BWU0 796 aaKnown RBP19.54■□□□□ 0.72
KDM5B-201ENST00000235790 PRXQ9BXM0 1461 aa19.53■□□□□ 0.72
KDM5B-201ENST00000235790 ARAP1Q96P48 1450 aa19.52■□□□□ 0.72
KDM5B-201ENST00000235790 PEG3Q9GZU2 1588 aa19.52■□□□□ 0.71
KDM5B-201ENST00000235790 FMN1Q68DA7 1419 aa19.51■□□□□ 0.71
KDM5B-201ENST00000235790 CUX1P39880 1505 aa19.51■□□□□ 0.71
KDM5B-201ENST00000235790 RAD54L2Q9Y4B4 1467 aa19.5■□□□□ 0.71
KDM5B-201ENST00000235790 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.71
KDM5B-201ENST00000235790 HMGXB3Q12766 1538 aa19.49■□□□□ 0.71
KDM5B-201ENST00000235790 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
KDM5B-201ENST00000235790 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
KDM5B-201ENST00000235790 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
KDM5B-201ENST00000235790 CFDP1Q9UEE9 299 aaPredicted RBP19.47■□□□□ 0.71
KDM5B-201ENST00000235790 FAM9BQ8IZU0 186 aa19.47■□□□□ 0.71
KDM5B-201ENST00000235790 TIMELESSQ9UNS1 1208 aa19.45■□□□□ 0.7
KDM5B-201ENST00000235790 PLEKHD1A6NEE1 506 aa19.45■□□□□ 0.7
KDM5B-201ENST00000235790 KDM2AQ9Y2K7 1162 aa19.41■□□□□ 0.7
KDM5B-201ENST00000235790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.4■□□□□ 0.71e-10■■□□□ 11.5
KDM5B-201ENST00000235790 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
KDM5B-201ENST00000235790 PPP1R15AO75807 674 aaPredicted RBP19.37■□□□□ 0.69
KDM5B-201ENST00000235790 MRS2Q9HD23 443 aa19.37■□□□□ 0.69
KDM5B-201ENST00000235790 PHLDB1Q86UU1 1377 aa19.36■□□□□ 0.69
KDM5B-201ENST00000235790 FOXD1Q16676 465 aa19.34■□□□□ 0.69
KDM5B-201ENST00000235790 NESP48681 1621 aa19.34■□□□□ 0.69
KDM5B-201ENST00000235790 LRRC9Q6ZRR7 1453 aa19.3■□□□□ 0.68
KDM5B-201ENST00000235790 KCNH8Q96L42 1107 aa19.3■□□□□ 0.68
KDM5B-201ENST00000235790 RRBP1Q9P2E9 1410 aaKnown RBP19.3■□□□□ 0.68
KDM5B-201ENST00000235790 GAPVD1Q14C86 1478 aa19.3■□□□□ 0.68
KDM5B-201ENST00000235790 IRX6P78412 446 aaPredicted RBP19.29■□□□□ 0.68
KDM5B-201ENST00000235790 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
KDM5B-201ENST00000235790 SUPT16HQ9Y5B9 1047 aaKnown RBP19.27■□□□□ 0.67
KDM5B-201ENST00000235790 MPHOSPH9Q99550 1183 aa19.26■□□□□ 0.67
KDM5B-201ENST00000235790 TMC1Q8TDI8 760 aa19.24■□□□□ 0.67
KDM5B-201ENST00000235790 HSPA5P11021 654 aaKnown RBP19.23■□□□□ 0.67
KDM5B-201ENST00000235790 RGL3Q3MIN7 710 aa19.23■□□□□ 0.67
KDM5B-201ENST00000235790 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
KDM5B-201ENST00000235790 SALL2Q9Y467 1007 aaPredicted RBP19.22■□□□□ 0.67
KDM5B-201ENST00000235790 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
KDM5B-201ENST00000235790 SENP3-EIF4A1A0A087X0R7 540 aa19.18■□□□□ 0.66
KDM5B-201ENST00000235790 FGD6Q6ZV73 1430 aa19.18■□□□□ 0.66
KDM5B-201ENST00000235790 CASKIN1Q8WXD9 1431 aa19.18■□□□□ 0.66
KDM5B-201ENST00000235790 CCER2I3L3R5 266 aa19.18■□□□□ 0.66
KDM5B-201ENST00000235790 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
KDM5B-201ENST00000235790 L3MBTL2Q969R5 705 aa19.16■□□□□ 0.66
KDM5B-201ENST00000235790 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
KDM5B-201ENST00000235790 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.666e-9■■■■□ 22.3
KDM5B-201ENST00000235790 CARD11Q9BXL7 1154 aa19.16■□□□□ 0.66
KDM5B-201ENST00000235790 CCDC18Q5T9S5 1454 aa19.15■□□□□ 0.66
KDM5B-201ENST00000235790 PKD2Q13563 968 aa19.14■□□□□ 0.65
KDM5B-201ENST00000235790 JPH4Q96JJ6 628 aa19.12■□□□□ 0.65
KDM5B-201ENST00000235790 CARMIL2Q6F5E8 1435 aa19.12■□□□□ 0.65
KDM5B-201ENST00000235790 CHGAP10645 457 aaKnown RBP19.12■□□□□ 0.65
KDM5B-201ENST00000235790 TIAM1Q13009 1591 aa19.12■□□□□ 0.65
KDM5B-201ENST00000235790 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
KDM5B-201ENST00000235790 MYOM3Q5VTT5 1437 aa19.09■□□□□ 0.65
KDM5B-201ENST00000235790 DNMBPQ6XZF7 1577 aa19.08■□□□□ 0.65
KDM5B-201ENST00000235790 DAXXQ9UER7 740 aaPredicted RBP19.07■□□□□ 0.64
KDM5B-201ENST00000235790 DCAF11Q8TEB1 546 aa19.07■□□□□ 0.64
KDM5B-201ENST00000235790 NPM1P06748 294 aaKnown RBP eCLIP19.07■□□□□ 0.64
KDM5B-201ENST00000235790 NCOA2Q15596 1464 aa19.06■□□□□ 0.64
KDM5B-201ENST00000235790 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
KDM5B-201ENST00000235790 ZNF644Q9H582 1327 aaPredicted RBP19.04■□□□□ 0.64
KDM5B-201ENST00000235790 EFCAB5A4FU69 1503 aa19.02■□□□□ 0.64
KDM5B-201ENST00000235790 NUP155O75694 1391 aa19.02■□□□□ 0.64
KDM5B-201ENST00000235790 UACAQ9BZF9 1416 aa19.01■□□□□ 0.63
KDM5B-201ENST00000235790 CCDC136Q96JN2 1154 aa19.01■□□□□ 0.63
KDM5B-201ENST00000235790 HNRNPMP52272 730 aaKnown RBP eCLIP19■□□□□ 0.63
KDM5B-201ENST00000235790 ANKRD30AQ9BXX3 1397 aa19■□□□□ 0.63
KDM5B-201ENST00000235790 PCF11O94913 1555 aaKnown RBP18.95■□□□□ 0.62
KDM5B-201ENST00000235790 GRIN2BQ13224 1484 aa18.95■□□□□ 0.62
KDM5B-201ENST00000235790 RTL5Q5HYW3 569 aaPredicted RBP18.91■□□□□ 0.62
KDM5B-201ENST00000235790 MAP3K1Q13233 1512 aa18.91■□□□□ 0.62
KDM5B-201ENST00000235790 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
KDM5B-201ENST00000235790 URB2Q14146 1524 aaKnown RBP18.89■□□□□ 0.62
KDM5B-201ENST00000235790 CANXP27824 592 aaKnown RBP18.88■□□□□ 0.61
KDM5B-201ENST00000235790 NPM2Q86SE8 214 aaKnown RBP18.88■□□□□ 0.61
KDM5B-201ENST00000235790 HFM1A2PYH4 1435 aa18.88■□□□□ 0.61
KDM5B-201ENST00000235790 ANP32AP39687 249 aaKnown RBP18.88■□□□□ 0.61
KDM5B-201ENST00000235790 LAMC3Q9Y6N6 1575 aa18.87■□□□□ 0.61
KDM5B-201ENST00000235790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.86■□□□□ 0.613e-7■■□□□ 11.7
KDM5B-201ENST00000235790 WDR97A6NE52 1622 aa18.86■□□□□ 0.61
KDM5B-201ENST00000235790 MRC2Q9UBG0 1479 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms