RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ANP32EQ9BTT0 268 aa25.84■■□□□ 1.73
CDKN1B-201ENST00000228872 TSHZ2Q9NRE2 1034 aa25.84■■□□□ 1.73
CDKN1B-201ENST00000228872 ERCC6Q03468 1493 aa25.83■■□□□ 1.73
CDKN1B-201ENST00000228872 ABCA5Q8WWZ7 1642 aa25.83■■□□□ 1.73
CDKN1B-201ENST00000228872 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
CDKN1B-201ENST00000228872 CUL7Q14999 1698 aa25.77■■□□□ 1.72
CDKN1B-201ENST00000228872 CARMIL1Q5VZK9 1371 aa25.73■■□□□ 1.71
CDKN1B-201ENST00000228872 CLIP1P30622 1438 aa25.72■■□□□ 1.71
CDKN1B-201ENST00000228872 GAPVD1Q14C86 1478 aa25.7■■□□□ 1.7
CDKN1B-201ENST00000228872 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
CDKN1B-201ENST00000228872 TDRD9Q8NDG6 1382 aaKnown RBP25.67■■□□□ 1.7
CDKN1B-201ENST00000228872 BCL11AQ9H165 835 aa25.66■■□□□ 1.7
CDKN1B-201ENST00000228872 PBRM1Q86U86 1689 aa25.65■■□□□ 1.7
CDKN1B-201ENST00000228872 VPS8Q8N3P4 1428 aa25.63■■□□□ 1.69
CDKN1B-201ENST00000228872 DHX57Q6P158 1386 aaKnown RBP25.57■■□□□ 1.68
CDKN1B-201ENST00000228872 RANGAP1P46060 587 aaPredicted RBP25.56■■□□□ 1.68
CDKN1B-201ENST00000228872 APLP2Q06481 763 aa25.53■■□□□ 1.68
CDKN1B-201ENST00000228872 AQRO60306 1485 aaKnown RBP eCLIP25.52■■□□□ 1.686e-9■■■■■ 35.5
CDKN1B-201ENST00000228872 CTTNBP2Q8WZ74 1663 aa25.51■■□□□ 1.67
CDKN1B-201ENST00000228872 ZNF608Q9ULD9 1512 aaPredicted RBP25.5■■□□□ 1.67
CDKN1B-201ENST00000228872 GRIN2BQ13224 1484 aa25.5■■□□□ 1.67
CDKN1B-201ENST00000228872 EIF4G3O43432 1585 aaKnown RBP25.49■■□□□ 1.67
CDKN1B-201ENST00000228872 ADAMTS12P58397 1594 aa25.47■■□□□ 1.67
CDKN1B-201ENST00000228872 FHAD1B1AJZ9 1412 aa25.43■■□□□ 1.66
CDKN1B-201ENST00000228872 ARAP1Q96P48 1450 aa25.42■■□□□ 1.66
CDKN1B-201ENST00000228872 ARHGAP35Q9NRY4 1499 aa25.4■■□□□ 1.66
CDKN1B-201ENST00000228872 BCANQ96GW7 911 aa25.34■■□□□ 1.65
CDKN1B-201ENST00000228872 KCNH8Q96L42 1107 aa25.33■■□□□ 1.65
CDKN1B-201ENST00000228872 SNAPC4Q5SXM2 1469 aa25.31■■□□□ 1.64
CDKN1B-201ENST00000228872 EFCAB5A4FU69 1503 aa25.31■■□□□ 1.64
CDKN1B-201ENST00000228872 MAGI1Q96QZ7 1491 aaPredicted RBP25.3■■□□□ 1.64
CDKN1B-201ENST00000228872 FKBP8Q14318 412 aa25.27■■□□□ 1.64
CDKN1B-201ENST00000228872 SAMD9Q5K651 1589 aa25.22■■□□□ 1.63
CDKN1B-201ENST00000228872 RBM19Q9Y4C8 960 aaKnown RBP25.22■■□□□ 1.63
CDKN1B-201ENST00000228872 GRIN2AQ12879 1464 aa25.2■■□□□ 1.62
CDKN1B-201ENST00000228872 SYNJ2O15056 1496 aa25.19■■□□□ 1.62
CDKN1B-201ENST00000228872 IQGAP2Q13576 1575 aa25.18■■□□□ 1.62
CDKN1B-201ENST00000228872 RRBP1Q9P2E9 1410 aaKnown RBP25.18■■□□□ 1.62
CDKN1B-201ENST00000228872 KANK4Q5T7N3 995 aaPredicted RBP25.15■■□□□ 1.62
CDKN1B-201ENST00000228872 KIAA0586Q9BVV6 1533 aa25.1■■□□□ 1.61
CDKN1B-201ENST00000228872 FHOD3Q2V2M9 1422 aa25.09■■□□□ 1.61
CDKN1B-201ENST00000228872 NEFLP07196 543 aa25.09■■□□□ 1.61
CDKN1B-201ENST00000228872 UGGT2Q9NYU1 1516 aa25.07■■□□□ 1.6
CDKN1B-201ENST00000228872 MAP3K1Q13233 1512 aa25.07■■□□□ 1.6
CDKN1B-201ENST00000228872 CEP170Q5SW79 1584 aa25.06■■□□□ 1.6
CDKN1B-201ENST00000228872 PCF11O94913 1555 aaKnown RBP25.06■■□□□ 1.6
CDKN1B-201ENST00000228872 CHMP7Q8WUX9 453 aaPredicted RBP25.04■■□□□ 1.6
CDKN1B-201ENST00000228872 FMN1Q68DA7 1419 aa25.03■■□□□ 1.6
CDKN1B-201ENST00000228872 CCNB3Q8WWL7 1395 aa25.02■■□□□ 1.6
CDKN1B-201ENST00000228872 FYCO1Q9BQS8 1478 aa25.02■■□□□ 1.6
CDKN1B-201ENST00000228872 NUP160Q12769 1436 aa25.02■■□□□ 1.6
CDKN1B-201ENST00000228872 P3H3Q8IVL6 736 aa25.02■■□□□ 1.6
CDKN1B-201ENST00000228872 MAPKBP1O60336 1514 aa25.01■■□□□ 1.59
CDKN1B-201ENST00000228872 DDX10Q13206 875 aaKnown RBP25■■□□□ 1.59
CDKN1B-201ENST00000228872 TIAM1Q13009 1591 aa25■■□□□ 1.59
CDKN1B-201ENST00000228872 CFAP43Q8NDM7 1665 aa25■■□□□ 1.59
CDKN1B-201ENST00000228872 CASKIN1Q8WXD9 1431 aa25■■□□□ 1.59
CDKN1B-201ENST00000228872 MSH5O43196 834 aa24.99■■□□□ 1.59
CDKN1B-201ENST00000228872 ITGAEP38570 1179 aa24.97■■□□□ 1.59
CDKN1B-201ENST00000228872 CHD1O14646 1710 aa24.95■■□□□ 1.58
CDKN1B-201ENST00000228872 RAB3GAP2Q9H2M9 1393 aa24.94■■□□□ 1.58
CDKN1B-201ENST00000228872 KIAA0556O60303 1618 aa24.94■■□□□ 1.58
CDKN1B-201ENST00000228872 PPP1R15AO75807 674 aaPredicted RBP24.94■■□□□ 1.58
CDKN1B-201ENST00000228872 DISP1Q96F81 1524 aa24.91■■□□□ 1.58
CDKN1B-201ENST00000228872 FBLN2P98095 1184 aa24.91■■□□□ 1.58
CDKN1B-201ENST00000228872 CCER2I3L3R5 266 aa24.9■■□□□ 1.58
CDKN1B-201ENST00000228872 TRIM52Q96A61 297 aa24.89■■□□□ 1.57
CDKN1B-201ENST00000228872 LRRIQ1Q96JM4 1722 aa24.87■■□□□ 1.57
CDKN1B-201ENST00000228872 FANCIQ9NVI1 1328 aa24.85■■□□□ 1.57
CDKN1B-201ENST00000228872 LRRC9Q6ZRR7 1453 aa24.85■■□□□ 1.57
CDKN1B-201ENST00000228872 HECW1Q76N89 1606 aa24.81■■□□□ 1.56
CDKN1B-201ENST00000228872 ANP32CO43423 234 aa24.79■■□□□ 1.56
CDKN1B-201ENST00000228872 SETD5Q9C0A6 1442 aa24.79■■□□□ 1.56
CDKN1B-201ENST00000228872 SIN3AQ96ST3 1273 aa24.78■■□□□ 1.56
CDKN1B-201ENST00000228872 CCDC18Q5T9S5 1454 aa24.76■■□□□ 1.55
CDKN1B-201ENST00000228872 JPH4Q96JJ6 628 aa24.76■■□□□ 1.55
CDKN1B-201ENST00000228872 CARMIL2Q6F5E8 1435 aa24.75■■□□□ 1.55
CDKN1B-201ENST00000228872 ATP1B4Q9UN42 357 aaPredicted RBP24.75■■□□□ 1.55
CDKN1B-201ENST00000228872 SHROOM2Q13796 1616 aa24.73■■□□□ 1.55
CDKN1B-201ENST00000228872 ERICH6Q7L0X2 663 aa24.72■■□□□ 1.55
CDKN1B-201ENST00000228872 TIMELESSQ9UNS1 1208 aa24.71■■□□□ 1.55
CDKN1B-201ENST00000228872 RAPGEF6Q8TEU7 1601 aa24.71■■□□□ 1.55
CDKN1B-201ENST00000228872 CDK11AQ9UQ88 783 aaPredicted RBP24.7■■□□□ 1.54
CDKN1B-201ENST00000228872 HIRIP3Q9BW71 556 aaPredicted RBP24.69■■□□□ 1.54
CDKN1B-201ENST00000228872 EPRSP07814 1512 aaKnown RBP24.67■■□□□ 1.54
CDKN1B-201ENST00000228872 PHLDB1Q86UU1 1377 aa24.66■■□□□ 1.54
CDKN1B-201ENST00000228872 CLASP1Q7Z460 1538 aa24.65■■□□□ 1.54
CDKN1B-201ENST00000228872 EHBP1L1Q8N3D4 1523 aa24.65■■□□□ 1.54
CDKN1B-201ENST00000228872 PRG4Q92954 1404 aaPredicted RBP24.62■■□□□ 1.53
CDKN1B-201ENST00000228872 MYT1LQ9UL68 1186 aa24.62■■□□□ 1.53
CDKN1B-201ENST00000228872 NUP153P49790 1475 aaKnown RBP24.61■■□□□ 1.53
CDKN1B-201ENST00000228872 SUPT6HQ7KZ85 1726 aaKnown RBP24.61■■□□□ 1.53
CDKN1B-201ENST00000228872 MTUS2Q5JR59 1369 aa24.6■■□□□ 1.53
CDKN1B-201ENST00000228872 MAGI3Q5TCQ9 1506 aa24.59■■□□□ 1.53
CDKN1B-201ENST00000228872 CDK13Q14004 1512 aaKnown RBP24.58■■□□□ 1.53
CDKN1B-201ENST00000228872 ABCA8O94911 1581 aa24.57■■□□□ 1.52
CDKN1B-201ENST00000228872 IRX6P78412 446 aaPredicted RBP24.57■■□□□ 1.52
CDKN1B-201ENST00000228872 PLB1Q6P1J6 1458 aa24.55■■□□□ 1.52
CDKN1B-201ENST00000228872 ARHGEF11O15085 1522 aa24.54■■□□□ 1.52
CDKN1B-201ENST00000228872 HNRNPUQ00839 825 aaKnown RBP eCLIP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms