RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 SIN3AQ96ST3 1273 aa26.61■■□□□ 1.85
CACTIN-201ENST00000221899 SETD5Q9C0A6 1442 aa26.61■■□□□ 1.85
CACTIN-201ENST00000221899 LRRC9Q6ZRR7 1453 aa26.6■■□□□ 1.85
CACTIN-201ENST00000221899 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
CACTIN-201ENST00000221899 PRDM2Q13029 1718 aa26.55■■□□□ 1.84
CACTIN-201ENST00000221899 MAP3K1Q13233 1512 aa26.54■■□□□ 1.84
CACTIN-201ENST00000221899 CADPSQ9ULU8 1353 aa26.53■■□□□ 1.84
CACTIN-201ENST00000221899 DDX10Q13206 875 aaKnown RBP26.52■■□□□ 1.84
CACTIN-201ENST00000221899 WDR97A6NE52 1622 aa26.51■■□□□ 1.83
CACTIN-201ENST00000221899 PCF11O94913 1555 aaKnown RBP26.47■■□□□ 1.83
CACTIN-201ENST00000221899 HIRIP3Q9BW71 556 aaPredicted RBP26.46■■□□□ 1.83
CACTIN-201ENST00000221899 FHAD1B1AJZ9 1412 aa26.46■■□□□ 1.83
CACTIN-201ENST00000221899 FHOD3Q2V2M9 1422 aa26.43■■□□□ 1.82
CACTIN-201ENST00000221899 CFAP43Q8NDM7 1665 aa26.4■■□□□ 1.82
CACTIN-201ENST00000221899 BCANQ96GW7 911 aa26.4■■□□□ 1.82
CACTIN-201ENST00000221899 TSHZ2Q9NRE2 1034 aa26.38■■□□□ 1.81
CACTIN-201ENST00000221899 RAD54L2Q9Y4B4 1467 aa26.35■■□□□ 1.81
CACTIN-201ENST00000221899 PPP1R15AO75807 674 aaPredicted RBP26.32■■□□□ 1.8
CACTIN-201ENST00000221899 FANCD2Q9BXW9 1451 aa26.31■■□□□ 1.8
CACTIN-201ENST00000221899 FKBP8Q14318 412 aa26.28■■□□□ 1.8
CACTIN-201ENST00000221899 FYCO1Q9BQS8 1478 aa26.26■■□□□ 1.8
CACTIN-201ENST00000221899 CASKIN1Q8WXD9 1431 aa26.24■■□□□ 1.79
CACTIN-201ENST00000221899 TIMELESSQ9UNS1 1208 aa26.24■■□□□ 1.79
CACTIN-201ENST00000221899 TRIM52Q96A61 297 aa26.22■■□□□ 1.79
CACTIN-201ENST00000221899 POLA1P09884 1462 aaPredicted RBP26.2■■□□□ 1.78
CACTIN-201ENST00000221899 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
CACTIN-201ENST00000221899 ANP32CO43423 234 aa26.18■■□□□ 1.78
CACTIN-201ENST00000221899 EFCAB5A4FU69 1503 aa26.18■■□□□ 1.78
CACTIN-201ENST00000221899 FGD6Q6ZV73 1430 aa26.18■■□□□ 1.78
CACTIN-201ENST00000221899 DNMBPQ6XZF7 1577 aa26.17■■□□□ 1.78
CACTIN-201ENST00000221899 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
CACTIN-201ENST00000221899 TONSLQ96HA7 1378 aa26.17■■□□□ 1.78
CACTIN-201ENST00000221899 TOPBP1Q92547 1522 aa26.16■■□□□ 1.78
CACTIN-201ENST00000221899 MTUS2Q5JR59 1369 aa26.15■■□□□ 1.78
CACTIN-201ENST00000221899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.14■■□□□ 1.78
CACTIN-201ENST00000221899 AQRO60306 1485 aaKnown RBP eCLIP26.14■■□□□ 1.771e-6■■■■□ 26.1
CACTIN-201ENST00000221899 CCDC18Q5T9S5 1454 aa26.14■■□□□ 1.77
CACTIN-201ENST00000221899 NESP48681 1621 aa26.13■■□□□ 1.77
CACTIN-201ENST00000221899 PTPRKQ15262 1439 aa26.13■■□□□ 1.77
CACTIN-201ENST00000221899 CTTNBP2Q8WZ74 1663 aa26.11■■□□□ 1.77
CACTIN-201ENST00000221899 FMN1Q68DA7 1419 aa26.11■■□□□ 1.77
CACTIN-201ENST00000221899 CCER2I3L3R5 266 aa26.1■■□□□ 1.77
CACTIN-201ENST00000221899 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
CACTIN-201ENST00000221899 NEFLP07196 543 aa26.08■■□□□ 1.77
CACTIN-201ENST00000221899 CUL7Q14999 1698 aa26.08■■□□□ 1.76
CACTIN-201ENST00000221899 HFM1A2PYH4 1435 aa26.04■■□□□ 1.76
CACTIN-201ENST00000221899 UACAQ9BZF9 1416 aa26.03■■□□□ 1.76
CACTIN-201ENST00000221899 PTPN23Q9H3S7 1636 aa26.02■■□□□ 1.76
CACTIN-201ENST00000221899 TDRD9Q8NDG6 1382 aaKnown RBP26.01■■□□□ 1.76
CACTIN-201ENST00000221899 NCOA2Q15596 1464 aa25.99■■□□□ 1.75
CACTIN-201ENST00000221899 NAIPQ13075 1403 aa25.99■■□□□ 1.75
CACTIN-201ENST00000221899 LRRIQ1Q96JM4 1722 aa25.98■■□□□ 1.75
CACTIN-201ENST00000221899 ANP32EQ9BTT0 268 aa25.97■■□□□ 1.75
CACTIN-201ENST00000221899 MYOM3Q5VTT5 1437 aa25.96■■□□□ 1.75
CACTIN-201ENST00000221899 RRP7BPQ9NSQ0 103 aa25.95■■□□□ 1.74
CACTIN-201ENST00000221899 CHIC2Q9UKJ5 165 aa25.95■■□□□ 1.74
CACTIN-201ENST00000221899 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
CACTIN-201ENST00000221899 GRIN2BQ13224 1484 aa25.91■■□□□ 1.74
CACTIN-201ENST00000221899 SAMD9Q5K651 1589 aa25.91■■□□□ 1.74
CACTIN-201ENST00000221899 SUPT6HQ7KZ85 1726 aaKnown RBP25.87■■□□□ 1.73
CACTIN-201ENST00000221899 KDM5BQ9UGL1 1544 aa25.86■■□□□ 1.73
CACTIN-201ENST00000221899 GAPVD1Q14C86 1478 aa25.86■■□□□ 1.73
CACTIN-201ENST00000221899 HNRNPUQ00839 825 aaKnown RBP eCLIP25.86■■□□□ 1.73
CACTIN-201ENST00000221899 RBM19Q9Y4C8 960 aaKnown RBP25.85■■□□□ 1.73
CACTIN-201ENST00000221899 EHBP1L1Q8N3D4 1523 aa25.83■■□□□ 1.73
CACTIN-201ENST00000221899 HSPA5P11021 654 aaKnown RBP25.83■■□□□ 1.73
CACTIN-201ENST00000221899 MAGI3Q5TCQ9 1506 aa25.83■■□□□ 1.72
CACTIN-201ENST00000221899 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
CACTIN-201ENST00000221899 ARID3CA6NKF2 412 aa25.81■■□□□ 1.72
CACTIN-201ENST00000221899 IRX6P78412 446 aaPredicted RBP25.81■■□□□ 1.72
CACTIN-201ENST00000221899 WASHC2AQ641Q2 1341 aa25.8■■□□□ 1.72
CACTIN-201ENST00000221899 UGGT2Q9NYU1 1516 aa25.79■■□□□ 1.72
CACTIN-201ENST00000221899 THOC2Q8NI27 1593 aaKnown RBP25.76■■□□□ 1.71
CACTIN-201ENST00000221899 FOXD1Q16676 465 aa25.75■■□□□ 1.71
CACTIN-201ENST00000221899 DENND4BO75064 1496 aaPredicted RBP25.75■■□□□ 1.71
CACTIN-201ENST00000221899 KDM6BO15054 1643 aa25.73■■□□□ 1.71
CACTIN-201ENST00000221899 ARHGEF11O15085 1522 aa25.72■■□□□ 1.71
CACTIN-201ENST00000221899 LAMC3Q9Y6N6 1575 aa25.71■■□□□ 1.71
CACTIN-201ENST00000221899 EIF4G2P78344 907 aaKnown RBP eCLIP25.71■■□□□ 1.71
CACTIN-201ENST00000221899 CCDC184Q52MB2 194 aa25.69■■□□□ 1.7
CACTIN-201ENST00000221899 MPHOSPH9Q99550 1183 aa25.69■■□□□ 1.7
CACTIN-201ENST00000221899 L3MBTL2Q969R5 705 aa25.67■■□□□ 1.7
CACTIN-201ENST00000221899 TCOF1Q13428 1488 aaKnown RBP25.67■■□□□ 1.7
CACTIN-201ENST00000221899 GCC2Q8IWJ2 1684 aa25.66■■□□□ 1.7
CACTIN-201ENST00000221899 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
CACTIN-201ENST00000221899 HECW1Q76N89 1606 aa25.66■■□□□ 1.7
CACTIN-201ENST00000221899 CDK13Q14004 1512 aaKnown RBP25.65■■□□□ 1.7
CACTIN-201ENST00000221899 C11orf95C9JLR9 678 aaPredicted RBP25.64■■□□□ 1.7
CACTIN-201ENST00000221899 EPRSP07814 1512 aaKnown RBP25.63■■□□□ 1.69
CACTIN-201ENST00000221899 PDS5BQ9NTI5 1447 aa25.62■■□□□ 1.69
CACTIN-201ENST00000221899 KIF21AQ7Z4S6 1674 aa25.6■■□□□ 1.69
CACTIN-201ENST00000221899 CNTLNQ9NXG0 1405 aa25.6■■□□□ 1.69
CACTIN-201ENST00000221899 FAM9BQ8IZU0 186 aa25.59■■□□□ 1.69
CACTIN-201ENST00000221899 AKNAQ7Z591 1439 aa25.56■■□□□ 1.68
CACTIN-201ENST00000221899 NBPF8Q3BBV2 869 aa25.55■■□□□ 1.68
CACTIN-201ENST00000221899 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
CACTIN-201ENST00000221899 CCDC7Q96M83 1385 aa25.54■■□□□ 1.68
CACTIN-201ENST00000221899 IQGAP2Q13576 1575 aa25.54■■□□□ 1.68
CACTIN-201ENST00000221899 PRKRIP1Q9H875 184 aaPredicted RBP25.54■■□□□ 1.68
CACTIN-201ENST00000221899 MIA2Q96PC5 1412 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms