RNA–Protein interactions for RNA: ENST00000219235.4

CCL22-201, Transcript of C-C motif chemokine ligand 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL22, Length 2,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL22-201ENST00000219235 KCNH8Q96L42 1107 aa13.4□□□□□ -0.27
CCL22-201ENST00000219235 EEA1Q15075 1411 aa13.39□□□□□ -0.27
CCL22-201ENST00000219235 BIVM-ERCC5R4GMW8 1640 aa13.38□□□□□ -0.27
CCL22-201ENST00000219235 LAMC3Q9Y6N6 1575 aa13.38□□□□□ -0.27
CCL22-201ENST00000219235 CLIP1P30622 1438 aa13.37□□□□□ -0.27
CCL22-201ENST00000219235 DHX57Q6P158 1386 aaKnown RBP13.34□□□□□ -0.27
CCL22-201ENST00000219235 FKBP8Q14318 412 aa13.33□□□□□ -0.27
CCL22-201ENST00000219235 TPRNQ4KMQ1 711 aa13.32□□□□□ -0.28
CCL22-201ENST00000219235 VPS8Q8N3P4 1428 aa13.32□□□□□ -0.28
CCL22-201ENST00000219235 CEP164Q9UPV0 1460 aa13.3□□□□□ -0.28
CCL22-201ENST00000219235 PDS5BQ9NTI5 1447 aa13.3□□□□□ -0.28
CCL22-201ENST00000219235 KIF21AQ7Z4S6 1674 aa13.28□□□□□ -0.28
CCL22-201ENST00000219235 FGD5Q6ZNL6 1462 aa13.27□□□□□ -0.28
CCL22-201ENST00000219235 RBM19Q9Y4C8 960 aaKnown RBP13.26□□□□□ -0.29
CCL22-201ENST00000219235 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
CCL22-201ENST00000219235 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
CCL22-201ENST00000219235 ITGAEP38570 1179 aa13.25□□□□□ -0.29
CCL22-201ENST00000219235 DNMBPQ6XZF7 1577 aa13.25□□□□□ -0.29
CCL22-201ENST00000219235 AEBP2Q6ZN18 517 aaPredicted RBP13.23□□□□□ -0.29
CCL22-201ENST00000219235 RAD54L2Q9Y4B4 1467 aa13.21□□□□□ -0.29
CCL22-201ENST00000219235 RAPGEF2Q9Y4G8 1499 aa13.21□□□□□ -0.29
CCL22-201ENST00000219235 POLA1P09884 1462 aaPredicted RBP13.21□□□□□ -0.3
CCL22-201ENST00000219235 KIF21BO75037 1637 aa13.21□□□□□ -0.3
CCL22-201ENST00000219235 NPM2Q86SE8 214 aaKnown RBP13.2□□□□□ -0.3
CCL22-201ENST00000219235 CUX2O14529 1486 aa13.2□□□□□ -0.3
CCL22-201ENST00000219235 KIF27Q86VH2 1401 aa13.19□□□□□ -0.3
CCL22-201ENST00000219235 NEFLP07196 543 aa13.19□□□□□ -0.3
CCL22-201ENST00000219235 KANK4Q5T7N3 995 aaPredicted RBP13.19□□□□□ -0.3
CCL22-201ENST00000219235 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
CCL22-201ENST00000219235 TRIM52Q96A61 297 aa13.16□□□□□ -0.3
CCL22-201ENST00000219235 MSH5O43196 834 aa13.16□□□□□ -0.3
CCL22-201ENST00000219235 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
CCL22-201ENST00000219235 MRC2Q9UBG0 1479 aa13.13□□□□□ -0.31
CCL22-201ENST00000219235 IGF1RP08069 1367 aa13.12□□□□□ -0.31
CCL22-201ENST00000219235 ABCA10Q8WWZ4 1543 aa13.11□□□□□ -0.31
CCL22-201ENST00000219235 PRXQ9BXM0 1461 aa13.11□□□□□ -0.31
CCL22-201ENST00000219235 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
CCL22-201ENST00000219235 HIRIP3Q9BW71 556 aaPredicted RBP13.11□□□□□ -0.31
CCL22-201ENST00000219235 TDRD9Q8NDG6 1382 aaKnown RBP13.09□□□□□ -0.31
CCL22-201ENST00000219235 ARAP1Q96P48 1450 aa13.06□□□□□ -0.32
CCL22-201ENST00000219235 PDIA4P13667 645 aaKnown RBP13.06□□□□□ -0.32
CCL22-201ENST00000219235 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
CCL22-201ENST00000219235 SIN3AQ96ST3 1273 aa13.06□□□□□ -0.32
CCL22-201ENST00000219235 WDR62O43379 1518 aa13.05□□□□□ -0.32
CCL22-201ENST00000219235 TARBP1Q13395 1621 aaKnown RBP13.05□□□□□ -0.32
CCL22-201ENST00000219235 IRX6P78412 446 aaPredicted RBP13.05□□□□□ -0.32
CCL22-201ENST00000219235 RRBP1Q9P2E9 1410 aaKnown RBP13.05□□□□□ -0.32
CCL22-201ENST00000219235 CCNB3Q8WWL7 1395 aa13.04□□□□□ -0.32
CCL22-201ENST00000219235 ERICH3Q5RHP9 1530 aa13.04□□□□□ -0.32
CCL22-201ENST00000219235 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
CCL22-201ENST00000219235 RAB3GAP2Q9H2M9 1393 aa13.04□□□□□ -0.32
CCL22-201ENST00000219235 THOC2Q8NI27 1593 aaKnown RBP13.03□□□□□ -0.32
CCL22-201ENST00000219235 PPP1R15AO75807 674 aaPredicted RBP13.02□□□□□ -0.32
CCL22-201ENST00000219235 MAPKBP1O60336 1514 aa13.01□□□□□ -0.33
CCL22-201ENST00000219235 GAPVD1Q14C86 1478 aa13.01□□□□□ -0.33
CCL22-201ENST00000219235 ABCA5Q8WWZ7 1642 aa13.01□□□□□ -0.33
CCL22-201ENST00000219235 ANP32CO43423 234 aa13□□□□□ -0.33
CCL22-201ENST00000219235 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.33
CCL22-201ENST00000219235 UBE2Q2Q8WVN8 375 aa12.99□□□□□ -0.33
CCL22-201ENST00000219235 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
CCL22-201ENST00000219235 CDK11AQ9UQ88 783 aaPredicted RBP12.98□□□□□ -0.33
CCL22-201ENST00000219235 CCER2I3L3R5 266 aa12.96□□□□□ -0.33
CCL22-201ENST00000219235 FANCIQ9NVI1 1328 aa12.96□□□□□ -0.33
CCL22-201ENST00000219235 IFT140Q96RY7 1462 aa12.95□□□□□ -0.34
CCL22-201ENST00000219235 CUL7Q14999 1698 aa12.93□□□□□ -0.34
CCL22-201ENST00000219235 HNRNPUQ00839 825 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCL22-201ENST00000219235 SETD5Q9C0A6 1442 aa12.92□□□□□ -0.34
CCL22-201ENST00000219235 FAM50AQ14320 339 aaKnown RBP12.92□□□□□ -0.34
CCL22-201ENST00000219235 PBRM1Q86U86 1689 aa12.91□□□□□ -0.34
CCL22-201ENST00000219235 DEKP35659 375 aaKnown RBP12.91□□□□□ -0.34
CCL22-201ENST00000219235 HAP1P54257 671 aaPredicted RBP12.9□□□□□ -0.34
CCL22-201ENST00000219235 EIF4G3O43432 1585 aaKnown RBP12.88□□□□□ -0.35
CCL22-201ENST00000219235 GRIN2BQ13224 1484 aa12.88□□□□□ -0.35
CCL22-201ENST00000219235 PDE4CQ08493 712 aa12.87□□□□□ -0.35
CCL22-201ENST00000219235 ARHGAP35Q9NRY4 1499 aa12.86□□□□□ -0.35
CCL22-201ENST00000219235 FHAD1B1AJZ9 1412 aa12.84□□□□□ -0.35
CCL22-201ENST00000219235 ADAMTS12P58397 1594 aa12.84□□□□□ -0.35
CCL22-201ENST00000219235 NBR1Q14596 966 aa12.84□□□□□ -0.35
CCL22-201ENST00000219235 P3H3Q8IVL6 736 aa12.84□□□□□ -0.35
CCL22-201ENST00000219235 SNAPC4Q5SXM2 1469 aa12.83□□□□□ -0.35
CCL22-201ENST00000219235 CHMP4AQ9BY43 222 aa12.83□□□□□ -0.36
CCL22-201ENST00000219235 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
CCL22-201ENST00000219235 PHLDB1Q86UU1 1377 aa12.82□□□□□ -0.36
CCL22-201ENST00000219235 B4GALNT3Q6L9W6 998 aa12.82□□□□□ -0.36
CCL22-201ENST00000219235 PKNOX2Q96KN3 472 aa12.82□□□□□ -0.36
CCL22-201ENST00000219235 CTTNBP2Q8WZ74 1663 aa12.81□□□□□ -0.36
CCL22-201ENST00000219235 ATP1B4Q9UN42 357 aaPredicted RBP12.81□□□□□ -0.36
CCL22-201ENST00000219235 PPP4R2Q9NY27 417 aa12.8□□□□□ -0.36
CCL22-201ENST00000219235 TMEM132AQ24JP5 1023 aa12.79□□□□□ -0.36
CCL22-201ENST00000219235 MYT1LQ9UL68 1186 aa12.79□□□□□ -0.36
CCL22-201ENST00000219235 FBLN2P98095 1184 aa12.78□□□□□ -0.36
CCL22-201ENST00000219235 TONSLQ96HA7 1378 aa12.78□□□□□ -0.36
CCL22-201ENST00000219235 PAK3O75914 559 aaPredicted RBP12.78□□□□□ -0.36
CCL22-201ENST00000219235 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
CCL22-201ENST00000219235 DHX37Q8IY37 1157 aaKnown RBP12.77□□□□□ -0.36
CCL22-201ENST00000219235 TIAM1Q13009 1591 aa12.77□□□□□ -0.37
CCL22-201ENST00000219235 NOP58Q9Y2X3 529 aaKnown RBP12.76□□□□□ -0.37
CCL22-201ENST00000219235 FHOD3Q2V2M9 1422 aa12.76□□□□□ -0.37
CCL22-201ENST00000219235 CHMP7Q8WUX9 453 aaPredicted RBP12.75□□□□□ -0.37
CCL22-201ENST00000219235 CCDC184Q52MB2 194 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms