RNA–Protein interactions for RNA: ENST00000219235.4

CCL22-201, Transcript of C-C motif chemokine ligand 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL22, Length 2,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL22-201ENST00000219235 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
CCL22-201ENST00000219235 SLC24A1O60721 1099 aa16.36■□□□□ 0.21
CCL22-201ENST00000219235 CCDC180Q9P1Z9 1646 aa16.07■□□□□ 0.16
CCL22-201ENST00000219235 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
CCL22-201ENST00000219235 HRCP23327 699 aa15.64■□□□□ 0.09
CCL22-201ENST00000219235 SUPT5HO00267 1087 aaKnown RBP15.58■□□□□ 0.09
CCL22-201ENST00000219235 ZCCHC6Q5VYS8 1495 aaKnown RBP15.56■□□□□ 0.08
CCL22-201ENST00000219235 DCAF8L2P0C7V8 631 aa15.48■□□□□ 0.07
CCL22-201ENST00000219235 PPARGC1BQ86YN6 1023 aaKnown RBP15.43■□□□□ 0.06
CCL22-201ENST00000219235 PCGF6Q9BYE7 350 aa15.41■□□□□ 0.06
CCL22-201ENST00000219235 ABCC9O60706 1549 aa15.36■□□□□ 0.05
CCL22-201ENST00000219235 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
CCL22-201ENST00000219235 MYT1Q01538 1121 aa15.27■□□□□ 0.04
CCL22-201ENST00000219235 CHIC1Q5VXU3 224 aa15.24■□□□□ 0.03
CCL22-201ENST00000219235 DCAF1Q9Y4B6 1507 aa15.24■□□□□ 0.03
CCL22-201ENST00000219235 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
CCL22-201ENST00000219235 PRKCSHP14314 528 aaPredicted RBP15.09■□□□□ 0.01
CCL22-201ENST00000219235 DAXXQ9UER7 740 aaPredicted RBP15.06■□□□□ 0
CCL22-201ENST00000219235 TTBK1Q5TCY1 1321 aaPredicted RBP15.05■□□□□ 0
CCL22-201ENST00000219235 NACADO15069 1562 aa14.99□□□□□ -0.01
CCL22-201ENST00000219235 LOC105371045A0A1W2PR82 267 aa14.96□□□□□ -0.01
CCL22-201ENST00000219235 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
CCL22-201ENST00000219235 RB1CC1Q8TDY2 1594 aa14.88□□□□□ -0.03
CCL22-201ENST00000219235 APLP2Q06481 763 aa14.86□□□□□ -0.03
CCL22-201ENST00000219235 TRIM26Q12899 539 aaPredicted RBP14.84□□□□□ -0.03
CCL22-201ENST00000219235 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
CCL22-201ENST00000219235 ERICH6Q7L0X2 663 aa14.77□□□□□ -0.04
CCL22-201ENST00000219235 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
CCL22-201ENST00000219235 ZEB1P37275 1124 aaPredicted RBP14.66□□□□□ -0.06
CCL22-201ENST00000219235 UNC13AQ9UPW8 1703 aa14.64□□□□□ -0.07
CCL22-201ENST00000219235 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
CCL22-201ENST00000219235 PABPN1Q86U42 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCL22-201ENST00000219235 BICRAQ9NZM4 1560 aa14.49□□□□□ -0.09
CCL22-201ENST00000219235 CECR2Q9BXF3 1484 aa14.48□□□□□ -0.09
CCL22-201ENST00000219235 RTN4Q9NQC3 1192 aaKnown RBP14.47□□□□□ -0.09
CCL22-201ENST00000219235 FAM9AQ8IZU1 332 aaPredicted RBP14.45□□□□□ -0.1
CCL22-201ENST00000219235 NCBP3Q53F19 620 aaKnown RBP14.45□□□□□ -0.1
CCL22-201ENST00000219235 NEUROD1Q13562 356 aa14.43□□□□□ -0.1
CCL22-201ENST00000219235 ACIN1Q9UKV3 1341 aaKnown RBP14.43□□□□□ -0.1
CCL22-201ENST00000219235 RSF1Q96T23 1441 aaPredicted RBP14.42□□□□□ -0.1
CCL22-201ENST00000219235 MROH2BQ7Z745 1585 aa14.37□□□□□ -0.11
CCL22-201ENST00000219235 GTF3C3Q9Y5Q9 886 aa14.35□□□□□ -0.11
CCL22-201ENST00000219235 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
CCL22-201ENST00000219235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.31□□□□□ -0.12
CCL22-201ENST00000219235 BAZ1AQ9NRL2 1556 aaPredicted RBP14.28□□□□□ -0.12
CCL22-201ENST00000219235 WIZO95785 1651 aa14.26□□□□□ -0.13
CCL22-201ENST00000219235 CCER1Q8TC90 406 aaPredicted RBP14.25□□□□□ -0.13
CCL22-201ENST00000219235 SMARCA4P51532 1647 aa14.24□□□□□ -0.13
CCL22-201ENST00000219235 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
CCL22-201ENST00000219235 DIEXFQ68CQ4 756 aaKnown RBP14.23□□□□□ -0.13
CCL22-201ENST00000219235 EIF5BO60841 1220 aaKnown RBP14.09□□□□□ -0.15
CCL22-201ENST00000219235 YTHDC1Q96MU7 727 aaKnown RBP14.09□□□□□ -0.15
CCL22-201ENST00000219235 EIF4G1Q04637 1599 aaKnown RBP14.04□□□□□ -0.16
CCL22-201ENST00000219235 TOP2AP11388 1531 aaKnown RBP14.04□□□□□ -0.16
CCL22-201ENST00000219235 ATAD2BQ9ULI0 1458 aa14.02□□□□□ -0.16
CCL22-201ENST00000219235 PEG3Q9GZU2 1588 aa14.02□□□□□ -0.17
CCL22-201ENST00000219235 TIMELESSQ9UNS1 1208 aa13.99□□□□□ -0.17
CCL22-201ENST00000219235 SMARCA2P51531 1590 aa13.96□□□□□ -0.17
CCL22-201ENST00000219235 ARXQ96QS3 562 aa13.96□□□□□ -0.17
CCL22-201ENST00000219235 CCDC88BA6NC98 1476 aa13.95□□□□□ -0.18
CCL22-201ENST00000219235 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
CCL22-201ENST00000219235 ZNF316A6NFI3 1004 aaPredicted RBP13.94□□□□□ -0.18
CCL22-201ENST00000219235 MIER1Q8N108 512 aa13.89□□□□□ -0.19
CCL22-201ENST00000219235 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
CCL22-201ENST00000219235 CC2D2AQ9P2K1 1620 aa13.85□□□□□ -0.19
CCL22-201ENST00000219235 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
CCL22-201ENST00000219235 RANGAP1P46060 587 aaPredicted RBP13.82□□□□□ -0.2
CCL22-201ENST00000219235 HMGXB3Q12766 1538 aa13.82□□□□□ -0.2
CCL22-201ENST00000219235 KLHL34Q8N239 644 aa13.82□□□□□ -0.2
CCL22-201ENST00000219235 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
CCL22-201ENST00000219235 BCL11AQ9H165 835 aa13.8□□□□□ -0.2
CCL22-201ENST00000219235 TULP1O00294 542 aaPredicted RBP13.74□□□□□ -0.21
CCL22-201ENST00000219235 CEP162Q5TB80 1403 aa13.73□□□□□ -0.21
CCL22-201ENST00000219235 WRNQ14191 1432 aaPredicted RBP eCLIP13.72□□□□□ -0.21
CCL22-201ENST00000219235 HNRNPUL2Q1KMD3 747 aaKnown RBP13.72□□□□□ -0.21
CCL22-201ENST00000219235 ABCC8Q09428 1581 aa13.71□□□□□ -0.21
CCL22-201ENST00000219235 KCNA4P22459 653 aa13.68□□□□□ -0.22
CCL22-201ENST00000219235 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
CCL22-201ENST00000219235 UBTFP17480 764 aaKnown RBP13.65□□□□□ -0.22
CCL22-201ENST00000219235 SUPT16HQ9Y5B9 1047 aaKnown RBP13.64□□□□□ -0.23
CCL22-201ENST00000219235 SOGA1O94964 1423 aa13.6□□□□□ -0.23
CCL22-201ENST00000219235 TNIKQ9UKE5 1360 aa13.6□□□□□ -0.23
CCL22-201ENST00000219235 TSHZ2Q9NRE2 1034 aa13.58□□□□□ -0.24
CCL22-201ENST00000219235 CFTRP13569 1480 aa13.58□□□□□ -0.24
CCL22-201ENST00000219235 ANP32EQ9BTT0 268 aa13.56□□□□□ -0.24
CCL22-201ENST00000219235 CADPSQ9ULU8 1353 aa13.54□□□□□ -0.24
CCL22-201ENST00000219235 HOMEZQ8IX15 550 aa13.54□□□□□ -0.24
CCL22-201ENST00000219235 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
CCL22-201ENST00000219235 RUSC2Q8N2Y8 1516 aa13.53□□□□□ -0.24
CCL22-201ENST00000219235 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
CCL22-201ENST00000219235 SYNJ1O43426 1573 aa13.52□□□□□ -0.24
CCL22-201ENST00000219235 NESP48681 1621 aa13.5□□□□□ -0.25
CCL22-201ENST00000219235 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
CCL22-201ENST00000219235 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
CCL22-201ENST00000219235 BCANQ96GW7 911 aa13.46□□□□□ -0.25
CCL22-201ENST00000219235 PRDM2Q13029 1718 aa13.45□□□□□ -0.26
CCL22-201ENST00000219235 GOLGA3Q08378 1498 aa13.43□□□□□ -0.26
CCL22-201ENST00000219235 CUX1P39880 1505 aa13.42□□□□□ -0.26
CCL22-201ENST00000219235 TOP2BQ02880 1626 aa13.41□□□□□ -0.26
CCL22-201ENST00000219235 FANCD2Q9BXW9 1451 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms